RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 CACNA1SQ13698 1873 aa17.81■□□□□ 0.44
GGA3-216ENST00000583282 NTSR2O95665 410 aa17.8■□□□□ 0.44
GGA3-216ENST00000583282 IGKV5-2P06315 115 aa17.8■□□□□ 0.44
GGA3-216ENST00000583282 GTF2E1P29083 439 aaPredicted RBP17.8■□□□□ 0.44
GGA3-216ENST00000583282 ST5P78524 1137 aa17.8■□□□□ 0.44
GGA3-216ENST00000583282 RTL5Q5HYW3 569 aaPredicted RBP17.8■□□□□ 0.44
GGA3-216ENST00000583282 API5Q9BZZ5 524 aaKnown RBP17.8■□□□□ 0.44
GGA3-216ENST00000583282 DLEC1Q9Y238 1755 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 NEURL1BA8MQ27 555 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 TRIM27P14373 513 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 ZKSCAN2Q63HK3 967 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 PPP1R42Q7Z4L9 355 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 CLUAP1Q96AJ1 413 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 UTP14AQ9BVJ6 771 aaKnown RBP17.79■□□□□ 0.44
GGA3-216ENST00000583282 NYXQ9GZU5 481 aa17.79■□□□□ 0.44
GGA3-216ENST00000583282 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
GGA3-216ENST00000583282 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
GGA3-216ENST00000583282 ATF7IPQ6VMQ6 1270 aa17.78■□□□□ 0.44
GGA3-216ENST00000583282 JARID2Q92833 1246 aaPredicted RBP17.78■□□□□ 0.44
GGA3-216ENST00000583282 FHDC1Q9C0D6 1143 aaPredicted RBP17.78■□□□□ 0.44
GGA3-216ENST00000583282 TRMT112Q9UI30 125 aaKnown RBP17.78■□□□□ 0.44
GGA3-216ENST00000583282 ABCC4O15439 1325 aa17.77■□□□□ 0.44
GGA3-216ENST00000583282 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.44
GGA3-216ENST00000583282 PLIN1O60240 522 aa17.77■□□□□ 0.44
GGA3-216ENST00000583282 BEND3Q5T5X7 828 aa17.77■□□□□ 0.44
GGA3-216ENST00000583282 FTSJ3Q8IY81 847 aaKnown RBP17.77■□□□□ 0.44
GGA3-216ENST00000583282 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
GGA3-216ENST00000583282 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
GGA3-216ENST00000583282 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
GGA3-216ENST00000583282 MYH3P11055 1940 aa17.76■□□□□ 0.43
GGA3-216ENST00000583282 TPTE2Q6XPS3 522 aa17.76■□□□□ 0.43
GGA3-216ENST00000583282 SYNE4Q8N205 404 aa17.76■□□□□ 0.43
GGA3-216ENST00000583282 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
GGA3-216ENST00000583282 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
GGA3-216ENST00000583282 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
GGA3-216ENST00000583282 BRCA1P38398 1863 aaKnown RBP17.74■□□□□ 0.43
GGA3-216ENST00000583282 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
GGA3-216ENST00000583282 TRIM28Q13263 835 aaKnown RBP17.74■□□□□ 0.43
GGA3-216ENST00000583282 GCKRQ14397 625 aa17.74■□□□□ 0.43
GGA3-216ENST00000583282 UBE3BQ7Z3V4 1068 aa17.74■□□□□ 0.43
GGA3-216ENST00000583282 NLGN2Q8NFZ4 835 aa17.74■□□□□ 0.43
GGA3-216ENST00000583282 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
GGA3-216ENST00000583282 RNF123Q5XPI4 1314 aa17.73■□□□□ 0.43
GGA3-216ENST00000583282 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
GGA3-216ENST00000583282 ZBTB38Q8NAP3 1195 aaPredicted RBP17.73■□□□□ 0.43
GGA3-216ENST00000583282 SPEF2Q9C093 1822 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 ALDH1L1O75891 902 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 PCCAP05165 728 aaPredicted RBP17.72■□□□□ 0.43
GGA3-216ENST00000583282 RLBP1P12271 317 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 CHRNA5P30532 468 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 CCT4P50991 539 aaKnown RBP17.72■□□□□ 0.43
GGA3-216ENST00000583282 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 DZIP1LQ8IYY4 767 aaKnown RBP17.72■□□□□ 0.43
GGA3-216ENST00000583282 TMEM57Q8N5G2 664 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 PANK1Q8TE04 598 aa17.72■□□□□ 0.43
GGA3-216ENST00000583282 GRM8O00222 908 aa17.71■□□□□ 0.43
GGA3-216ENST00000583282 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
GGA3-216ENST00000583282 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
GGA3-216ENST00000583282 C2CD5Q86YS7 1000 aa17.71■□□□□ 0.43
GGA3-216ENST00000583282 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
GGA3-216ENST00000583282 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.71■□□□□ 0.43
GGA3-216ENST00000583282 C9orf78Q9NZ63 289 aaPredicted RBP17.71■□□□□ 0.43
GGA3-216ENST00000583282 CD2APQ9Y5K6 639 aa17.71■□□□□ 0.43
GGA3-216ENST00000583282 BRIP1Q9BX63 1249 aa17.7■□□□□ 0.42
GGA3-216ENST00000583282 COL4A1P02462 1669 aa17.69■□□□□ 0.42
GGA3-216ENST00000583282 DPEP1P16444 411 aa17.69■□□□□ 0.42
GGA3-216ENST00000583282 PDE6BP35913 854 aa17.69■□□□□ 0.42
GGA3-216ENST00000583282 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
GGA3-216ENST00000583282 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
GGA3-216ENST00000583282 TAF1P21675 1872 aa17.69■□□□□ 0.42
GGA3-216ENST00000583282 CDHR2Q9BYE9 1310 aa17.69■□□□□ 0.42
GGA3-216ENST00000583282 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
GGA3-216ENST00000583282 C20orf194Q5TEA3 1177 aa17.68■□□□□ 0.42
GGA3-216ENST00000583282 INTS3Q68E01 1043 aaKnown RBP17.68■□□□□ 0.42
GGA3-216ENST00000583282 MEIS3Q99687 375 aa17.68■□□□□ 0.42
GGA3-216ENST00000583282 H7C1W4 665 aa17.67■□□□□ 0.42
GGA3-216ENST00000583282 NBPF7P0C2Y1 421 aaPredicted RBP17.67■□□□□ 0.42
GGA3-216ENST00000583282 CASP7P55210 303 aa17.67■□□□□ 0.42
GGA3-216ENST00000583282 ZNF622Q969S3 477 aaKnown RBP eCLIP17.67■□□□□ 0.42
GGA3-216ENST00000583282 H0YIN7 160 aa17.66■□□□□ 0.42
GGA3-216ENST00000583282 CTSWP56202 376 aa17.66■□□□□ 0.42
GGA3-216ENST00000583282 PELP1Q8IZL8 1130 aaKnown RBP17.66■□□□□ 0.42
GGA3-216ENST00000583282 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
GGA3-216ENST00000583282 SUCLG2Q96I99 432 aa17.66■□□□□ 0.42
GGA3-216ENST00000583282 NLRP3Q96P20 1036 aa17.66■□□□□ 0.42
GGA3-216ENST00000583282 COG6Q9Y2V7 657 aa17.66■□□□□ 0.42
GGA3-216ENST00000583282 PDE8AO60658 829 aa17.65■□□□□ 0.42
GGA3-216ENST00000583282 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
GGA3-216ENST00000583282 MS4A1P11836 297 aa17.65■□□□□ 0.42
GGA3-216ENST00000583282 TGFB2P61812 414 aa17.65■□□□□ 0.42
GGA3-216ENST00000583282 SLC10A5Q5PT55 438 aa17.65■□□□□ 0.42
GGA3-216ENST00000583282 CHMP3Q9Y3E7 222 aa17.65■□□□□ 0.42
GGA3-216ENST00000583282 SLX4Q8IY92 1834 aa17.64■□□□□ 0.41
GGA3-216ENST00000583282 ARFGEF1Q9Y6D6 1849 aa17.64■□□□□ 0.41
GGA3-216ENST00000583282 USP44Q9H0E7 712 aa17.64■□□□□ 0.41
GGA3-216ENST00000583282 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
GGA3-216ENST00000583282 SRGNP10124 158 aa17.63■□□□□ 0.41
GGA3-216ENST00000583282 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
GGA3-216ENST00000583282 MVPQ14764 893 aaKnown RBP17.63■□□□□ 0.41
GGA3-216ENST00000583282 FAM161AQ3B820 660 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms