RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 ST7Q9NRC1 585 aa12.48□□□□□ -0.41
TOP3A-214ENST00000582981 CDC37L1Q7L3B6 337 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 TTC14Q96N46 770 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 SBNO1A3KN83 1393 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 TMEM2Q9UHN6 1383 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 CTIFO43310 598 aaKnown RBP12.47□□□□□ -0.41
TOP3A-214ENST00000582981 TEFQ10587 303 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
TOP3A-214ENST00000582981 MAP3K2Q9Y2U5 619 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 SETD1AO15047 1707 aaKnown RBP12.47□□□□□ -0.41
TOP3A-214ENST00000582981 RAB11FIP3O75154 756 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 KDM4AO75164 1064 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
TOP3A-214ENST00000582981 CAPN2P17655 700 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 LIG1P18858 919 aa12.47□□□□□ -0.41
TOP3A-214ENST00000582981 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
TOP3A-214ENST00000582981 MAP3K5Q99683 1374 aa12.46□□□□□ -0.41
TOP3A-214ENST00000582981 SLFNL1Q499Z3 407 aa12.46□□□□□ -0.41
TOP3A-214ENST00000582981 LUZP1Q86V48 1076 aa12.46□□□□□ -0.41
TOP3A-214ENST00000582981 CALCOCO1Q9P1Z2 691 aa12.46□□□□□ -0.41
TOP3A-214ENST00000582981 MTMR6Q9Y217 621 aa12.46□□□□□ -0.41
TOP3A-214ENST00000582981 REREQ9P2R6 1566 aa12.46□□□□□ -0.41
TOP3A-214ENST00000582981 ADAMTS13Q76LX8 1427 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 KCNA6P17658 529 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 PTGS1P23219 599 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 UVSSAQ2YD98 709 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 ZNF530Q6P9A1 599 aaPredicted RBP12.46□□□□□ -0.42
TOP3A-214ENST00000582981 CLASRPQ8N2M8 674 aaKnown RBP12.46□□□□□ -0.42
TOP3A-214ENST00000582981 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 MON2Q7Z3U7 1717 aa12.46□□□□□ -0.42
TOP3A-214ENST00000582981 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.42
TOP3A-214ENST00000582981 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 MYL6BP14649 208 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 RBM8AQ9Y5S9 174 aaKnown RBP12.45□□□□□ -0.42
TOP3A-214ENST00000582981 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 NMIQ13287 307 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-214ENST00000582981 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 GOLGA6L6A8MZA4 724 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 TNNT1P13805 278 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
TOP3A-214ENST00000582981 LRMPQ12912 555 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 LARP1BQ659C4 914 aaKnown RBP12.45□□□□□ -0.42
TOP3A-214ENST00000582981 KIF18AQ8NI77 898 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 CHMP4CQ96CF2 233 aa12.45□□□□□ -0.42
TOP3A-214ENST00000582981 A0A0D9SFI3 127 aa12.44□□□□□ -0.42
TOP3A-214ENST00000582981 UBE2HP62256 183 aa12.44□□□□□ -0.42
TOP3A-214ENST00000582981 CCDC129Q6ZRS4 1044 aa12.44□□□□□ -0.42
TOP3A-214ENST00000582981 ERCC4Q92889 916 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-214ENST00000582981 PPP6R1Q9UPN7 881 aa12.44□□□□□ -0.42
TOP3A-214ENST00000582981 NRBP1Q9UHY1 535 aa12.44□□□□□ -0.42
TOP3A-214ENST00000582981 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 JAK2O60674 1132 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 FSD1Q9BTV5 496 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-214ENST00000582981 CYP46A1Q9Y6A2 500 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 POLA2Q14181 598 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 ZNF589Q86UQ0 364 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-214ENST00000582981 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-214ENST00000582981 TMX1Q9H3N1 280 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 EID1Q9Y6B2 187 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 KDRP35968 1356 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 SUCLG2Q96I99 432 aa12.43□□□□□ -0.42
TOP3A-214ENST00000582981 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOP3A-214ENST00000582981 TPD52L1Q16890 204 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-214ENST00000582981 SEC62Q99442 399 aaKnown RBP12.42□□□□□ -0.42
TOP3A-214ENST00000582981 SPATA31D1Q6ZQQ2 1576 aa12.42□□□□□ -0.42
TOP3A-214ENST00000582981 GLRX3O76003 335 aaKnown RBP12.42□□□□□ -0.42
TOP3A-214ENST00000582981 CREB3L3Q68CJ9 461 aa12.42□□□□□ -0.42
TOP3A-214ENST00000582981 LARP1Q6PKG0 1096 aaKnown RBP12.42□□□□□ -0.42
TOP3A-214ENST00000582981 BICC1Q9H694 974 aaKnown RBP12.42□□□□□ -0.42
TOP3A-214ENST00000582981 ECHDC1Q9NTX5 307 aa12.42□□□□□ -0.42
TOP3A-214ENST00000582981 DACT1Q9NYF0 836 aa12.42□□□□□ -0.42
TOP3A-214ENST00000582981 MORC2Q9Y6X9 1032 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-214ENST00000582981 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
TOP3A-214ENST00000582981 CCDC186Q7Z3E2 898 aa12.41□□□□□ -0.42
TOP3A-214ENST00000582981 ADCY9O60503 1353 aa12.41□□□□□ -0.42
TOP3A-214ENST00000582981 SMTNL1A8MU46 457 aa12.41□□□□□ -0.42
TOP3A-214ENST00000582981 GOLGA6L4A6NEF3 574 aa12.41□□□□□ -0.42
TOP3A-214ENST00000582981 AKAP12Q02952 1782 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 SASH1O94885 1247 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 HNRNPH2P55795 449 aaKnown RBP12.4□□□□□ -0.42
TOP3A-214ENST00000582981 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 KMT5BQ4FZB7 885 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 CCDC171Q6TFL3 1326 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 RGPD8O14715 1765 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-214ENST00000582981 ZKSCAN1P17029 563 aaPredicted RBP12.4□□□□□ -0.42
TOP3A-214ENST00000582981 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 BICD2Q8TD16 824 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
TOP3A-214ENST00000582981 TTC21AQ8NDW8 1320 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
TOP3A-214ENST00000582981 ANO6Q4KMQ2 910 aa12.39□□□□□ -0.43
TOP3A-214ENST00000582981 SSH2Q76I76 1423 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms