RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 PLA2G12BQ9BX93 195 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
TRAPPC8-211ENST00000582539 MAP3K15Q6ZN16 1313 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 ATP5JP18859 108 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 SYNE3Q6ZMZ3 975 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 TNS2Q63HR2 1409 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 NHSL1Q5SYE7 1610 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 MPHOSPH8Q99549 860 aa12.1□□□□□ -0.47
TRAPPC8-211ENST00000582539 KDM4FA0A1W2PPD8 638 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 EYA2O00167 538 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 PKD1L3Q7Z443 1732 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 GOLGA6L4A6NEF3 574 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 CYP27B1O15528 508 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 PDE8AO60658 829 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 UBE3BQ7Z3V4 1068 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 UTP14AQ9BVJ6 771 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 CHMLP26374 656 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 SART3Q15020 963 aaKnown RBP12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 USP26Q9BXU7 913 aa12.09□□□□□ -0.47
TRAPPC8-211ENST00000582539 CLEC4GQ6UXB4 293 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 AXIN2Q9Y2T1 843 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 BLOC1S2Q6QNY1 142 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 NEUROD6Q96NK8 337 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 CDKL5O76039 1030 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 GNAT2P19087 354 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 RALYLQ86SE5 291 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 ZGPATQ8N5A5 531 aaKnown RBP12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 ZBTB38Q8NAP3 1195 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 MEGF6O75095 1541 aa12.08□□□□□ -0.48
TRAPPC8-211ENST00000582539 NEK4P51957 841 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 ANKRD2Q9GZV1 360 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 H7C1W4 665 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 ADCY9O60503 1353 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 ZPR1O75312 459 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 HMGN5P82970 282 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 SLC39A6Q13433 755 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 NFKBIBQ15653 356 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 ZRSR1Q15695 479 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 METTL24Q5JXM2 366 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 BICC1Q9H694 974 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 RPAP1Q9BWH6 1393 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
TRAPPC8-211ENST00000582539 SH3TC1Q8TE82 1336 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 GSE1Q14687 1217 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 SPTY2D1Q68D10 685 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 LIMCH1Q9UPQ0 1083 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 DHX8Q14562 1220 aaKnown RBP12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 VPS72Q15906 364 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
TRAPPC8-211ENST00000582539 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 IMMTQ16891 758 aaKnown RBP12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 ADAMTS7Q9UKP4 1686 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 SSFA2P28290 1259 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 FAM184AQ8NB25 1140 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 SUCLG2Q96I99 432 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 SGSM2O43147 1006 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 LMBR1LQ6UX01 489 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
TRAPPC8-211ENST00000582539 ERICH2A1L162 156 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 ADRA2BP18089 450 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 TNNI3KQ59H18 835 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 VPS53Q5VIR6 699 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 RGS22Q8NE09 1264 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 WASF1Q92558 559 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 PDRG1Q9NUG6 133 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 FPGT-TNNI3KV9GXZ4 949 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 MCMDC2Q4G0Z9 681 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 CAVIN4Q5BKX8 364 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 ATL3Q6DD88 541 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 VPS37DQ86XT2 251 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 SEMA3EO15041 775 aa12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 SMARCA5O60264 1052 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC8-211ENST00000582539 ISCA1Q9BUE6 129 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms