RNA–Protein interactions for RNA: ENST00000582509.1

TRAPPC8-209, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-209ENST00000582509 STRN4Q9NRL3 753 aa9.63□□□□□ -0.87
TRAPPC8-209ENST00000582509 C2CD2LO14523 706 aa9.62□□□□□ -0.87
TRAPPC8-209ENST00000582509 ARID4AP29374 1257 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC8-209ENST00000582509 SPEM2Q0P670 501 aa9.62□□□□□ -0.87
TRAPPC8-209ENST00000582509 CAPN12Q6ZSI9 719 aa9.62□□□□□ -0.87
TRAPPC8-209ENST00000582509 TREML1Q86YW5 311 aa9.62□□□□□ -0.87
TRAPPC8-209ENST00000582509 HELQQ8TDG4 1101 aa9.62□□□□□ -0.87
TRAPPC8-209ENST00000582509 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 CELA2BP08218 269 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 ZNF385CQ66K41 422 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 PHLDB3Q6NSJ2 640 aa9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 SLCO4C1Q6ZQN7 724 aa9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 ACDQ96AP0 544 aa9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
TRAPPC8-209ENST00000582509 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC8-209ENST00000582509 TNFRSF10BO14763 440 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 OIP5O43482 229 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 SF3B2Q13435 895 aaKnown RBP9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 CCINQ13939 588 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 LYPD4Q6UWN0 246 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 PNMA5Q96PV4 448 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 GGA1Q9UJY5 639 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 HCN2Q9UL51 889 aa9.59□□□□□ -0.87
TRAPPC8-209ENST00000582509 SIN3BO75182 1162 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 BRD1O95696 1058 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 ALKBH2Q6NS38 261 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 SYT9Q86SS6 491 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 ETFBKMTQ8IXQ9 262 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 PIK3R5Q8WYR1 880 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 EGFL7Q9UHF1 273 aa9.58□□□□□ -0.88
TRAPPC8-209ENST00000582509 NEURL1BA8MQ27 555 aa9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 OPLAHO14841 1288 aa9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 GALNT6Q8NCL4 622 aa9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 RTCBQ9Y3I0 505 aaKnown RBP9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
TRAPPC8-209ENST00000582509 FAM13AO94988 1023 aa9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 RPLP1P05386 114 aaKnown RBP9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 ZAP70P43403 619 aa9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 EDARADDQ8WWZ3 215 aa9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 SLC30A3Q99726 388 aa9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 GSX2Q9BZM3 304 aa9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 FNDC3AQ9Y2H6 1198 aaKnown RBP9.56□□□□□ -0.88
TRAPPC8-209ENST00000582509 EGFRP00533 1210 aa9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 EPXP11678 715 aa9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 ALAS2P22557 587 aa9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 PCBP4P57723 403 aaKnown RBP9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 FKBP4Q02790 459 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 RGL4Q8IZJ4 473 aa9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 NEDD1Q8NHV4 660 aa9.55□□□□□ -0.88
TRAPPC8-209ENST00000582509 PATL2C9JE40 543 aaKnown RBP9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 ARHGEF15O94989 841 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 ABL1P00519 1130 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 PCSK2P16519 638 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 NPR3P17342 541 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 PCSK7Q16549 785 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 NOM1Q5C9Z4 860 aaKnown RBP9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 CMTR1Q8N1G2 835 aaKnown RBP9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 TNFRSF25Q93038 417 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 BHMTQ93088 406 aa9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
TRAPPC8-209ENST00000582509 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
TRAPPC8-209ENST00000582509 SCNN1AP37088 669 aa9.53□□□□□ -0.88
TRAPPC8-209ENST00000582509 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
TRAPPC8-209ENST00000582509 ELOA3CA0A087WX78 387 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 ELOA3DA6NLF2 546 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 XYLBO75191 536 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 MAP3K6O95382 1288 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 AMPD1P23109 780 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 MARSP56192 900 aaKnown RBP9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 GRIN2CQ14957 1233 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 ELOA3BQ3SY89 546 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 TTC16Q8NEE8 873 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
TRAPPC8-209ENST00000582509 PIK3R2O00459 728 aa9.51□□□□□ -0.89
TRAPPC8-209ENST00000582509 NFKB1P19838 968 aa9.51□□□□□ -0.89
TRAPPC8-209ENST00000582509 MPSTP25325 297 aa9.51□□□□□ -0.89
TRAPPC8-209ENST00000582509 TXNDC2Q86VQ3 553 aa9.51□□□□□ -0.89
TRAPPC8-209ENST00000582509 KLF15Q9UIH9 416 aa9.51□□□□□ -0.89
TRAPPC8-209ENST00000582509 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
TRAPPC8-209ENST00000582509 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 ZBTB39O15060 712 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 ICMTO60725 284 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 RARAP10276 462 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 GRNP28799 593 aaKnown RBP9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 AAMPQ13685 434 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 PODNQ7Z5L7 613 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 RAB44Q7Z6P3 723 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 GPR152Q8TDT2 470 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 SCARF2Q96GP6 870 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 KCNMB2Q9Y691 235 aa9.5□□□□□ -0.89
TRAPPC8-209ENST00000582509 UBAP1LF5GYI3 381 aa9.49□□□□□ -0.89
TRAPPC8-209ENST00000582509 MZF1P28698 734 aaPredicted RBP9.49□□□□□ -0.89
TRAPPC8-209ENST00000582509 USP5P45974 858 aa9.49□□□□□ -0.89
TRAPPC8-209ENST00000582509 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
TRAPPC8-209ENST00000582509 KCNA1Q09470 495 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms