RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 KRT24Q2M2I5 525 aa29.1■■■□□ 2.25
CASC3-207ENST00000581849 COPS6Q7L5N1 327 aa29.1■■■□□ 2.25
CASC3-207ENST00000581849 ZNF853P0CG23 659 aa29.09■■■□□ 2.25
CASC3-207ENST00000581849 FKBP4Q02790 459 aaKnown RBP eCLIP29.09■■■□□ 2.25
CASC3-207ENST00000581849 CC2D2BQ6DHV5 1058 aa29.09■■■□□ 2.25
CASC3-207ENST00000581849 XAGE3Q8WTP9 111 aa29.09■■■□□ 2.25
CASC3-207ENST00000581849 HDGFL1Q5TGJ6 251 aa29.08■■■□□ 2.25
CASC3-207ENST00000581849 RPGRQ92834 1020 aaKnown RBP29.08■■■□□ 2.25
CASC3-207ENST00000581849 IFT57Q9NWB7 429 aa29.08■■■□□ 2.25
CASC3-207ENST00000581849 GRIPAP1Q4V328 841 aa29.07■■■□□ 2.24
CASC3-207ENST00000581849 SLC10A5Q5PT55 438 aa29.07■■■□□ 2.24
CASC3-207ENST00000581849 NECTIN2Q92692 538 aa29.07■■■□□ 2.24
CASC3-207ENST00000581849 UTP14AQ9BVJ6 771 aaKnown RBP29.07■■■□□ 2.24
CASC3-207ENST00000581849 MBIPQ9NS73 344 aa29.07■■■□□ 2.24
CASC3-207ENST00000581849 DBF4Q9UBU7 674 aaPredicted RBP29.07■■■□□ 2.24
CASC3-207ENST00000581849 SNED1Q8TER0 1413 aa29.06■■■□□ 2.24
CASC3-207ENST00000581849 GNAI1P63096 354 aa29.06■■■□□ 2.24
CASC3-207ENST00000581849 SMC1BQ8NDV3 1235 aa29.06■■■□□ 2.24
CASC3-207ENST00000581849 CRAMP1Q96RY5 1269 aa29.06■■■□□ 2.24
CASC3-207ENST00000581849 CHPF2Q9P2E5 772 aa29.06■■■□□ 2.24
CASC3-207ENST00000581849 TCIRG1Q13488 830 aa29.05■■■□□ 2.24
CASC3-207ENST00000581849 AIMP1Q12904 312 aaKnown RBP29.04■■■□□ 2.24
CASC3-207ENST00000581849 DUSP27Q5VZP5 1158 aa29.04■■■□□ 2.24
CASC3-207ENST00000581849 RBM17Q96I25 401 aaKnown RBP29.04■■■□□ 2.24
CASC3-207ENST00000581849 NLRP3Q96P20 1036 aa29.04■■■□□ 2.24
CASC3-207ENST00000581849 NLRP10Q86W26 655 aa29.03■■■□□ 2.24
CASC3-207ENST00000581849 PSMD1Q99460 953 aa29.03■■■□□ 2.24
CASC3-207ENST00000581849 PLBD2Q8NHP8 589 aa29.02■■■□□ 2.24
CASC3-207ENST00000581849 HYPKQ9NX55 129 aa29.02■■■□□ 2.24
CASC3-207ENST00000581849 POTECB2RU33 542 aa29.01■■■□□ 2.23
CASC3-207ENST00000581849 OLFM4Q6UX06 510 aa29■■■□□ 2.23
CASC3-207ENST00000581849 ZNF316A6NFI3 1004 aaPredicted RBP28.99■■■□□ 2.23
CASC3-207ENST00000581849 ANKRD13DQ6ZTN6 518 aa28.99■■■□□ 2.23
CASC3-207ENST00000581849 CHMP4AQ9BY43 222 aa28.99■■■□□ 2.23
CASC3-207ENST00000581849 ZNF277Q9NRM2 450 aaPredicted RBP28.99■■■□□ 2.23
CASC3-207ENST00000581849 IARSP41252 1262 aaKnown RBP28.98■■■□□ 2.23
CASC3-207ENST00000581849 SH3TC1Q8TE82 1336 aa28.97■■■□□ 2.23
CASC3-207ENST00000581849 CCDC27Q2M243 656 aa28.97■■■□□ 2.23
CASC3-207ENST00000581849 NCBP3Q53F19 620 aaKnown RBP28.97■■■□□ 2.23
CASC3-207ENST00000581849 C3orf67Q6ZVT6 689 aa28.97■■■□□ 2.23
CASC3-207ENST00000581849 SYNE4Q8N205 404 aa28.97■■■□□ 2.23
CASC3-207ENST00000581849 L3MBTL3Q96JM7 780 aaPredicted RBP28.97■■■□□ 2.23
CASC3-207ENST00000581849 PPEF1O14829 653 aaPredicted RBP28.96■■■□□ 2.23
CASC3-207ENST00000581849 DDNO94850 711 aaPredicted RBP28.96■■■□□ 2.23
CASC3-207ENST00000581849 CCDC184Q52MB2 194 aa28.96■■■□□ 2.23
CASC3-207ENST00000581849 TRMT112Q9UI30 125 aaKnown RBP28.96■■■□□ 2.23
CASC3-207ENST00000581849 SCN4AP35499 1836 aa28.96■■■□□ 2.23
CASC3-207ENST00000581849 LAMB2P55268 1798 aa28.96■■■□□ 2.23
CASC3-207ENST00000581849 IQCA1LA6NCM1 817 aa28.95■■■□□ 2.22
CASC3-207ENST00000581849 ISCA1Q9BUE6 129 aa28.95■■■□□ 2.22
CASC3-207ENST00000581849 FZD9O00144 591 aa28.93■■■□□ 2.22
CASC3-207ENST00000581849 ANP32CO43423 234 aa28.93■■■□□ 2.22
CASC3-207ENST00000581849 TRIM28Q13263 835 aaKnown RBP28.93■■■□□ 2.22
CASC3-207ENST00000581849 DNAJC5GQ8N7S2 189 aa28.93■■■□□ 2.22
CASC3-207ENST00000581849 TMX4Q9H1E5 349 aaPredicted RBP28.93■■■□□ 2.22
CASC3-207ENST00000581849 JDP2Q8WYK2 163 aa28.92■■■□□ 2.22
CASC3-207ENST00000581849 ATP6V0A2Q9Y487 856 aa28.92■■■□□ 2.22
CASC3-207ENST00000581849 ABCC4O15439 1325 aa28.92■■■□□ 2.22
CASC3-207ENST00000581849 BBOX1O75936 387 aa28.91■■■□□ 2.22
CASC3-207ENST00000581849 VPS33BQ9H267 617 aa28.9■■■□□ 2.22
CASC3-207ENST00000581849 ZNF541Q9H0D2 1346 aa28.9■■■□□ 2.22
CASC3-207ENST00000581849 HCLS1P14317 486 aaPredicted RBP28.89■■■□□ 2.22
CASC3-207ENST00000581849 GOLGA2Q08379 1002 aa28.89■■■□□ 2.22
CASC3-207ENST00000581849 MRS2Q9HD23 443 aa28.89■■■□□ 2.22
CASC3-207ENST00000581849 DDX60Q8IY21 1712 aaKnown RBP28.89■■■□□ 2.21
CASC3-207ENST00000581849 C8orf58Q8NAV2 365 aa28.88■■■□□ 2.21
CASC3-207ENST00000581849 CCDC30Q5VVM6 783 aa28.87■■■□□ 2.21
CASC3-207ENST00000581849 DDX46Q7L014 1031 aaKnown RBP28.87■■■□□ 2.21
CASC3-207ENST00000581849 TMC4Q7Z404 712 aa28.87■■■□□ 2.21
CASC3-207ENST00000581849 WWC1Q8IX03 1113 aa28.87■■■□□ 2.21
CASC3-207ENST00000581849 GPC2Q8N158 579 aa28.87■■■□□ 2.21
CASC3-207ENST00000581849 IL16Q14005 1332 aa28.87■■■□□ 2.21
CASC3-207ENST00000581849 ELL2O00472 640 aaPredicted RBP28.86■■■□□ 2.21
CASC3-207ENST00000581849 CHADLQ6NUI6 762 aa28.86■■■□□ 2.21
CASC3-207ENST00000581849 RIC3Q7Z5B4 369 aa28.86■■■□□ 2.21
CASC3-207ENST00000581849 SP8Q8IXZ3 490 aa28.86■■■□□ 2.21
CASC3-207ENST00000581849 TAF1DQ9H5J8 278 aaPredicted RBP28.86■■■□□ 2.21
CASC3-207ENST00000581849 GRAPQ13588 217 aa28.85■■■□□ 2.21
CASC3-207ENST00000581849 SUPT20HQ8NEM7 779 aa28.85■■■□□ 2.21
CASC3-207ENST00000581849 GRAPLQ8TC17 118 aaPredicted RBP28.85■■■□□ 2.21
CASC3-207ENST00000581849 RTFDC1Q9BY42 306 aaPredicted RBP28.85■■■□□ 2.21
CASC3-207ENST00000581849 COL4A5P29400 1685 aa28.84■■■□□ 2.21
CASC3-207ENST00000581849 ATP5J2-PTCD1G3V325 749 aa28.84■■■□□ 2.21
CASC3-207ENST00000581849 EIF6P56537 245 aaKnown RBP28.84■■■□□ 2.21
CASC3-207ENST00000581849 SF3B3Q15393 1217 aaKnown RBP28.84■■■□□ 2.21
CASC3-207ENST00000581849 LARGE2Q8N3Y3 721 aa28.84■■■□□ 2.21
CASC3-207ENST00000581849 KLRG1Q96E93 195 aa28.84■■■□□ 2.21
CASC3-207ENST00000581849 PHAXQ9H814 394 aaKnown RBP28.84■■■□□ 2.21
CASC3-207ENST00000581849 HACL1Q9UJ83 578 aa28.84■■■□□ 2.21
CASC3-207ENST00000581849 DDX58O95786 925 aaKnown RBP28.83■■■□□ 2.21
CASC3-207ENST00000581849 LDHDQ86WU2 507 aa28.83■■■□□ 2.21
CASC3-207ENST00000581849 TCERG1O14776 1098 aaKnown RBP28.82■■■□□ 2.2
CASC3-207ENST00000581849 HSP90B1P14625 803 aaKnown RBP28.82■■■□□ 2.2
CASC3-207ENST00000581849 FAM89AQ96GI7 184 aa28.82■■■□□ 2.2
CASC3-207ENST00000581849 LRRC37AA6NMS7 1700 aa28.82■■■□□ 2.2
CASC3-207ENST00000581849 NIM1KQ8IY84 436 aa28.8■■■□□ 2.2
CASC3-207ENST00000581849 TSPYL6Q8N831 410 aa28.8■■■□□ 2.2
CASC3-207ENST00000581849 ZBTB38Q8NAP3 1195 aaPredicted RBP28.8■■■□□ 2.2
CASC3-207ENST00000581849 CCDC191Q8NCU4 936 aa28.8■■■□□ 2.2
CASC3-207ENST00000581849 PPIP5K2O43314 1243 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms