RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 TSPYL4Q9UJ04 414 aa12.75□□□□□ -0.37
TOP3A-211ENST00000581536 LAS1LQ9Y4W2 734 aaKnown RBP12.75□□□□□ -0.37
TOP3A-211ENST00000581536 APAF1O14727 1248 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 MYL6BP14649 208 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 HLFQ16534 295 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
TOP3A-211ENST00000581536 L3MBTL3Q96JM7 780 aaPredicted RBP12.74□□□□□ -0.37
TOP3A-211ENST00000581536 CCDC88AQ3V6T2 1871 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 LAMB4A4D0S4 1761 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
TOP3A-211ENST00000581536 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-211ENST00000581536 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
TOP3A-211ENST00000581536 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
TOP3A-211ENST00000581536 NECTIN2Q92692 538 aa12.73□□□□□ -0.37
TOP3A-211ENST00000581536 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
TOP3A-211ENST00000581536 ARFGEF1Q9Y6D6 1849 aa12.73□□□□□ -0.37
TOP3A-211ENST00000581536 SCN7AQ01118 1682 aa12.73□□□□□ -0.37
TOP3A-211ENST00000581536 SBF1O95248 1867 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 CHL1O00533 1208 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 ANXA1P04083 346 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 TTLL7Q6ZT98 887 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 SETDB2Q96T68 719 aa12.72□□□□□ -0.37
TOP3A-211ENST00000581536 FAM177BA6PVY3 158 aa12.71□□□□□ -0.37
TOP3A-211ENST00000581536 LMOD3Q0VAK6 560 aa12.71□□□□□ -0.37
TOP3A-211ENST00000581536 PRR5LQ6MZQ0 368 aa12.71□□□□□ -0.37
TOP3A-211ENST00000581536 C2CD5Q86YS7 1000 aa12.71□□□□□ -0.37
TOP3A-211ENST00000581536 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
TOP3A-211ENST00000581536 CACNA1SQ13698 1873 aa12.71□□□□□ -0.37
TOP3A-211ENST00000581536 POTEB2H3BUK9 544 aa12.7□□□□□ -0.38
TOP3A-211ENST00000581536 PDIA6Q15084 440 aa12.7□□□□□ -0.38
TOP3A-211ENST00000581536 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
TOP3A-211ENST00000581536 DALRD3Q5D0E6 543 aaKnown RBP12.7□□□□□ -0.38
TOP3A-211ENST00000581536 ANP32CO43423 234 aa12.69□□□□□ -0.38
TOP3A-211ENST00000581536 LHX8Q68G74 356 aa12.69□□□□□ -0.38
TOP3A-211ENST00000581536 CLEC4GQ6UXB4 293 aa12.69□□□□□ -0.38
TOP3A-211ENST00000581536 LRP10Q7Z4F1 713 aa12.69□□□□□ -0.38
TOP3A-211ENST00000581536 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
TOP3A-211ENST00000581536 NIP7Q9Y221 180 aaKnown RBP eCLIP12.69□□□□□ -0.38
TOP3A-211ENST00000581536 DLEC1Q9Y238 1755 aa12.69□□□□□ -0.38
TOP3A-211ENST00000581536 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
TOP3A-211ENST00000581536 H0YIN7 160 aa12.68□□□□□ -0.38
TOP3A-211ENST00000581536 ZNF526Q8TF50 670 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-211ENST00000581536 ZNF622Q969S3 477 aaKnown RBP eCLIP12.68□□□□□ -0.38
TOP3A-211ENST00000581536 BRIP1Q9BX63 1249 aa12.68□□□□□ -0.38
TOP3A-211ENST00000581536 ZBTB3Q9H5J0 574 aa12.68□□□□□ -0.38
TOP3A-211ENST00000581536 G3V3G9 751 aa12.67□□□□□ -0.38
TOP3A-211ENST00000581536 NBPF5PQ86XG9 351 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-211ENST00000581536 CFAP44Q96MT7 982 aa12.67□□□□□ -0.38
TOP3A-211ENST00000581536 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
TOP3A-211ENST00000581536 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
TOP3A-211ENST00000581536 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
TOP3A-211ENST00000581536 COL11A2P13942 1736 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-211ENST00000581536 MAP3K15Q6ZN16 1313 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 ELL2O00472 640 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-211ENST00000581536 NPHP1O15259 732 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 GPTP24298 496 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 CNBD1Q8NA66 436 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
TOP3A-211ENST00000581536 PDE6BP35913 854 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 PRELPP51888 382 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 AIMP1Q12904 312 aaKnown RBP12.65□□□□□ -0.38
TOP3A-211ENST00000581536 TPTE2Q6XPS3 522 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 MAMSTRQ6ZN01 415 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 COPS6Q7L5N1 327 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 NUTM1Q86Y26 1132 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 ZNF428Q96B54 188 aa12.65□□□□□ -0.38
TOP3A-211ENST00000581536 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
TOP3A-211ENST00000581536 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 SRGNP10124 158 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 ST5P78524 1137 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 RASSF7Q02833 373 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 C9orf131Q5VYM1 1079 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-211ENST00000581536 ZNF34Q8IZ26 560 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 XAGE3Q8WTP9 111 aa12.64□□□□□ -0.39
TOP3A-211ENST00000581536 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
TOP3A-211ENST00000581536 UBN2Q6ZU65 1347 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 C21orf2O43822 256 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 PPP1R37O75864 691 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 ERFEQ4G0M1 354 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
TOP3A-211ENST00000581536 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 CHPF2Q9P2E5 772 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 ADCY9O60503 1353 aa12.63□□□□□ -0.39
TOP3A-211ENST00000581536 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
TOP3A-211ENST00000581536 FER1L6Q2WGJ9 1857 aa12.62□□□□□ -0.39
TOP3A-211ENST00000581536 GNAI1P63096 354 aa12.62□□□□□ -0.39
TOP3A-211ENST00000581536 FAM9BQ8IZU0 186 aa12.62□□□□□ -0.39
TOP3A-211ENST00000581536 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
TOP3A-211ENST00000581536 TAF1P21675 1872 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms