RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 DDX21Q9NR30 783 aaKnown RBP eCLIP20.69■□□□□ 0.9
ATG13-227ENST00000581416 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
ATG13-227ENST00000581416 CHPF2Q9P2E5 772 aa20.69■□□□□ 0.9
ATG13-227ENST00000581416 ADAMTSL1Q8N6G6 1762 aa20.69■□□□□ 0.9
ATG13-227ENST00000581416 GTF2E1P29083 439 aaPredicted RBP20.68■□□□□ 0.9
ATG13-227ENST00000581416 SOGA3Q5TF21 947 aa20.68■□□□□ 0.9
ATG13-227ENST00000581416 HOXA10P31260 410 aaPredicted RBP20.67■□□□□ 0.9
ATG13-227ENST00000581416 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
ATG13-227ENST00000581416 AIMP1Q12904 312 aaKnown RBP20.67■□□□□ 0.9
ATG13-227ENST00000581416 LTBP1Q14766 1721 aa20.67■□□□□ 0.9
ATG13-227ENST00000581416 SYNE4Q8N205 404 aa20.66■□□□□ 0.9
ATG13-227ENST00000581416 HOXB7P09629 217 aa20.65■□□□□ 0.9
ATG13-227ENST00000581416 HTRA3P83110 453 aa20.65■□□□□ 0.9
ATG13-227ENST00000581416 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
ATG13-227ENST00000581416 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
ATG13-227ENST00000581416 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
ATG13-227ENST00000581416 ZNF541Q9H0D2 1346 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 DDNO94850 711 aaPredicted RBP20.64■□□□□ 0.89
ATG13-227ENST00000581416 VEGFAP15692 232 aaPredicted RBP20.64■□□□□ 0.89
ATG13-227ENST00000581416 ALDH1B1P30837 517 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 APLP1P51693 650 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 FSTL1Q12841 308 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 SLC10A5Q5PT55 438 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 HDGFL1Q5TGJ6 251 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 DUSP27Q5VZP5 1158 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 DNAJC5GQ8N7S2 189 aa20.64■□□□□ 0.89
ATG13-227ENST00000581416 TCIRG1Q13488 830 aa20.63■□□□□ 0.89
ATG13-227ENST00000581416 PPP1R42Q7Z4L9 355 aa20.63■□□□□ 0.89
ATG13-227ENST00000581416 DUOX1Q9NRD9 1551 aa20.63■□□□□ 0.89
ATG13-227ENST00000581416 ZNF428Q96B54 188 aa20.62■□□□□ 0.89
ATG13-227ENST00000581416 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
ATG13-227ENST00000581416 CACNA1FO60840 1977 aa20.62■□□□□ 0.89
ATG13-227ENST00000581416 MYH3P11055 1940 aa20.61■□□□□ 0.89
ATG13-227ENST00000581416 RPGRQ92834 1020 aaKnown RBP20.61■□□□□ 0.89
ATG13-227ENST00000581416 CRAMP1Q96RY5 1269 aa20.61■□□□□ 0.89
ATG13-227ENST00000581416 IFT57Q9NWB7 429 aa20.61■□□□□ 0.89
ATG13-227ENST00000581416 ABCC4O15439 1325 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 POTEIP0CG38 1075 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 POTEJP0CG39 1038 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
ATG13-227ENST00000581416 IARSP41252 1262 aaKnown RBP20.6■□□□□ 0.89
ATG13-227ENST00000581416 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 SMC1BQ8NDV3 1235 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 PCNTO95613 3336 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 SPEF2Q9C093 1822 aa20.6■□□□□ 0.89
ATG13-227ENST00000581416 RNF123Q5XPI4 1314 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
ATG13-227ENST00000581416 HSP90AB3PQ58FF7 597 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 DPY19L2Q6NUT2 758 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 PLBD2Q8NHP8 589 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 PSMD1Q99460 953 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 ISCA1Q9BUE6 129 aa20.59■□□□□ 0.89
ATG13-227ENST00000581416 DBF4Q9UBU7 674 aaPredicted RBP20.59■□□□□ 0.89
ATG13-227ENST00000581416 PPEF1O14829 653 aaPredicted RBP20.58■□□□□ 0.89
ATG13-227ENST00000581416 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.89
ATG13-227ENST00000581416 FZD9O00144 591 aa20.57■□□□□ 0.88
ATG13-227ENST00000581416 GNAI1P63096 354 aa20.57■□□□□ 0.88
ATG13-227ENST00000581416 L3MBTL3Q96JM7 780 aaPredicted RBP20.57■□□□□ 0.88
ATG13-227ENST00000581416 NLRP3Q96P20 1036 aa20.57■□□□□ 0.88
ATG13-227ENST00000581416 PHAXQ9H814 394 aaKnown RBP20.57■□□□□ 0.88
ATG13-227ENST00000581416 ZNF316A6NFI3 1004 aaPredicted RBP20.56■□□□□ 0.88
ATG13-227ENST00000581416 ELL2O00472 640 aaPredicted RBP20.56■□□□□ 0.88
ATG13-227ENST00000581416 TCERG1O14776 1098 aaKnown RBP20.56■□□□□ 0.88
ATG13-227ENST00000581416 ANKRD13DQ6ZTN6 518 aa20.56■□□□□ 0.88
ATG13-227ENST00000581416 TSPYL6Q8N831 410 aa20.56■□□□□ 0.88
ATG13-227ENST00000581416 SH3TC1Q8TE82 1336 aa20.55■□□□□ 0.88
ATG13-227ENST00000581416 ATP5J2-PTCD1G3V325 749 aa20.55■□□□□ 0.88
ATG13-227ENST00000581416 CC2D2BQ6DHV5 1058 aa20.55■□□□□ 0.88
ATG13-227ENST00000581416 HYPKQ9NX55 129 aa20.55■□□□□ 0.88
ATG13-227ENST00000581416 TRMT112Q9UI30 125 aaKnown RBP20.55■□□□□ 0.88
ATG13-227ENST00000581416 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
ATG13-227ENST00000581416 TAF1DQ9H5J8 278 aaPredicted RBP20.53■□□□□ 0.88
ATG13-227ENST00000581416 ATP6V0A2Q9Y487 856 aa20.53■□□□□ 0.88
ATG13-227ENST00000581416 CALD1Q05682 793 aaKnown RBP20.52■□□□□ 0.88
ATG13-227ENST00000581416 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
ATG13-227ENST00000581416 FAM89AQ96GI7 184 aa20.52■□□□□ 0.88
ATG13-227ENST00000581416 TRPM7Q96QT4 1865 aa20.52■□□□□ 0.87
ATG13-227ENST00000581416 PSME4Q14997 1843 aa20.51■□□□□ 0.87
ATG13-227ENST00000581416 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
ATG13-227ENST00000581416 SCN9AQ15858 1988 aa20.51■□□□□ 0.87
ATG13-227ENST00000581416 TRIM28Q13263 835 aaKnown RBP20.5■□□□□ 0.87
ATG13-227ENST00000581416 KLRG1Q96E93 195 aa20.5■□□□□ 0.87
ATG13-227ENST00000581416 MRS2Q9HD23 443 aa20.5■□□□□ 0.87
ATG13-227ENST00000581416 ZNF646O15015 1829 aaPredicted RBP20.49■□□□□ 0.87
ATG13-227ENST00000581416 GRAPQ13588 217 aa20.49■□□□□ 0.87
ATG13-227ENST00000581416 CHADLQ6NUI6 762 aa20.49■□□□□ 0.87
ATG13-227ENST00000581416 GRAPLQ8TC17 118 aaPredicted RBP20.49■□□□□ 0.87
ATG13-227ENST00000581416 RTFDC1Q9BY42 306 aaPredicted RBP20.49■□□□□ 0.87
ATG13-227ENST00000581416 GRIPAP1Q4V328 841 aa20.48■□□□□ 0.87
ATG13-227ENST00000581416 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
ATG13-227ENST00000581416 GPC2Q8N158 579 aa20.48■□□□□ 0.87
ATG13-227ENST00000581416 A0A1B0GUL6 1792 aa20.48■□□□□ 0.87
ATG13-227ENST00000581416 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
ATG13-227ENST00000581416 SF3B3Q15393 1217 aaKnown RBP20.47■□□□□ 0.87
ATG13-227ENST00000581416 AOC3Q16853 763 aa20.47■□□□□ 0.87
ATG13-227ENST00000581416 SP8Q8IXZ3 490 aa20.47■□□□□ 0.87
ATG13-227ENST00000581416 LARGE2Q8N3Y3 721 aa20.47■□□□□ 0.87
ATG13-227ENST00000581416 JMYQ8N9B5 988 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms