RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 TRAF5O00463 557 aa19.73■□□□□ 0.75
IFT20-211ENST00000580991 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
IFT20-211ENST00000580991 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
IFT20-211ENST00000580991 MCOLN1Q9GZU1 580 aa19.73■□□□□ 0.75
IFT20-211ENST00000580991 TNRC18O15417 2968 aaPredicted RBP19.73■□□□□ 0.75
IFT20-211ENST00000580991 COL4A5P29400 1685 aa19.72■□□□□ 0.75
IFT20-211ENST00000580991 PRAMEF22A3QJZ6 481 aa19.72■□□□□ 0.75
IFT20-211ENST00000580991 AOC2O75106 756 aa19.72■□□□□ 0.75
IFT20-211ENST00000580991 LARGE2Q8N3Y3 721 aa19.72■□□□□ 0.75
IFT20-211ENST00000580991 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
IFT20-211ENST00000580991 CASP8AP2Q9UKL3 1982 aa19.72■□□□□ 0.75
IFT20-211ENST00000580991 NBPF26B4DH59 902 aa19.7■□□□□ 0.74
IFT20-211ENST00000580991 NBPF10Q6P3W6 841 aaKnown RBP19.7■□□□□ 0.74
IFT20-211ENST00000580991 SAPCD2Q86UD0 394 aa19.7■□□□□ 0.74
IFT20-211ENST00000580991 NBPF15Q8N660 670 aa19.7■□□□□ 0.74
IFT20-211ENST00000580991 NYXQ9GZU5 481 aa19.7■□□□□ 0.74
IFT20-211ENST00000580991 COL3A1P02461 1466 aaPredicted RBP19.7■□□□□ 0.74
IFT20-211ENST00000580991 BRPF1P55201 1214 aaPredicted RBP19.69■□□□□ 0.74
IFT20-211ENST00000580991 HLFQ16534 295 aa19.69■□□□□ 0.74
IFT20-211ENST00000580991 CC2D1BQ5T0F9 858 aaKnown RBP19.69■□□□□ 0.74
IFT20-211ENST00000580991 RPGRQ92834 1020 aaKnown RBP19.69■□□□□ 0.74
IFT20-211ENST00000580991 HHIPL1Q96JK4 782 aa19.69■□□□□ 0.74
IFT20-211ENST00000580991 ADARB2Q9NS39 739 aaKnown RBP19.68■□□□□ 0.74
IFT20-211ENST00000580991 PER1O15534 1290 aaPredicted RBP19.67■□□□□ 0.74
IFT20-211ENST00000580991 CELF2O95319 508 aaKnown RBP19.67■□□□□ 0.74
IFT20-211ENST00000580991 HOXA10P31260 410 aaPredicted RBP19.67■□□□□ 0.74
IFT20-211ENST00000580991 NIM1KQ8IY84 436 aa19.67■□□□□ 0.74
IFT20-211ENST00000580991 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
IFT20-211ENST00000580991 ABCC12Q96J65 1359 aa19.67■□□□□ 0.74
IFT20-211ENST00000580991 DGKZQ13574 1117 aa19.66■□□□□ 0.74
IFT20-211ENST00000580991 NUTM1Q86Y26 1132 aa19.66■□□□□ 0.74
IFT20-211ENST00000580991 GPRC5DQ9NZD1 345 aa19.66■□□□□ 0.74
IFT20-211ENST00000580991 PRKAR2BP31323 418 aa19.65■□□□□ 0.74
IFT20-211ENST00000580991 RTF1Q92541 710 aaKnown RBP19.65■□□□□ 0.74
IFT20-211ENST00000580991 KIF7Q2M1P5 1343 aa19.65■□□□□ 0.74
IFT20-211ENST00000580991 RBM17Q96I25 401 aaKnown RBP19.64■□□□□ 0.73
IFT20-211ENST00000580991 CRAMP1Q96RY5 1269 aa19.64■□□□□ 0.73
IFT20-211ENST00000580991 RIC1Q4ADV7 1423 aa19.64■□□□□ 0.73
IFT20-211ENST00000580991 ERVV-1B6SEH8 477 aa19.63■□□□□ 0.73
IFT20-211ENST00000580991 PPEF1O14829 653 aaPredicted RBP19.63■□□□□ 0.73
IFT20-211ENST00000580991 PPIP5K2O43314 1243 aa19.63■□□□□ 0.73
IFT20-211ENST00000580991 MCM10Q7L590 875 aa19.63■□□□□ 0.73
IFT20-211ENST00000580991 RSPH6AQ9H0K4 717 aa19.63■□□□□ 0.73
IFT20-211ENST00000580991 TMX4Q9H1E5 349 aaPredicted RBP19.63■□□□□ 0.73
IFT20-211ENST00000580991 VPS33BQ9H267 617 aa19.63■□□□□ 0.73
IFT20-211ENST00000580991 NUP98P52948 1817 aa19.62■□□□□ 0.73
IFT20-211ENST00000580991 CIAPIN1Q6FI81 312 aa19.62■□□□□ 0.73
IFT20-211ENST00000580991 GLIS2Q9BZE0 524 aaPredicted RBP19.62■□□□□ 0.73
IFT20-211ENST00000580991 PGAP2Q9UHJ9 254 aa19.62■□□□□ 0.73
IFT20-211ENST00000580991 IBTKQ9P2D0 1353 aaPredicted RBP19.61■□□□□ 0.73
IFT20-211ENST00000580991 NPC1L1Q9UHC9 1359 aa19.61■□□□□ 0.73
IFT20-211ENST00000580991 TCERG1O14776 1098 aaKnown RBP19.61■□□□□ 0.73
IFT20-211ENST00000580991 NOGQ13253 232 aa19.61■□□□□ 0.73
IFT20-211ENST00000580991 AOC3Q16853 763 aa19.61■□□□□ 0.73
IFT20-211ENST00000580991 ZC3H15Q8WU90 426 aaKnown RBP19.61■□□□□ 0.73
IFT20-211ENST00000580991 ZNRF3Q9ULT6 936 aa19.61■□□□□ 0.73
IFT20-211ENST00000580991 CXCL9Q07325 125 aa19.6■□□□□ 0.73
IFT20-211ENST00000580991 ZNF408Q9H9D4 720 aa19.6■□□□□ 0.73
IFT20-211ENST00000580991 MAP3K15Q6ZN16 1313 aa19.59■□□□□ 0.73
IFT20-211ENST00000580991 CDHR2Q9BYE9 1310 aa19.59■□□□□ 0.73
IFT20-211ENST00000580991 GMPSP49915 693 aaPredicted RBP19.59■□□□□ 0.73
IFT20-211ENST00000580991 NGEFQ8N5V2 710 aa19.59■□□□□ 0.73
IFT20-211ENST00000580991 LAMB4A4D0S4 1761 aa19.58■□□□□ 0.73
IFT20-211ENST00000580991 GPTP24298 496 aa19.58■□□□□ 0.72
IFT20-211ENST00000580991 KIF6Q6ZMV9 814 aa19.58■□□□□ 0.72
IFT20-211ENST00000580991 CDC37L1Q7L3B6 337 aa19.58■□□□□ 0.72
IFT20-211ENST00000580991 SLC51AQ86UW1 340 aa19.58■□□□□ 0.72
IFT20-211ENST00000580991 SUPT20HQ8NEM7 779 aa19.58■□□□□ 0.72
IFT20-211ENST00000580991 UBN2Q6ZU65 1347 aa19.57■□□□□ 0.72
IFT20-211ENST00000580991 HTATSF1O43719 755 aaKnown RBP19.57■□□□□ 0.72
IFT20-211ENST00000580991 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
IFT20-211ENST00000580991 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
IFT20-211ENST00000580991 ATP6V0A2Q9Y487 856 aa19.57■□□□□ 0.72
IFT20-211ENST00000580991 CNGB1Q14028 1251 aaPredicted RBP19.56■□□□□ 0.72
IFT20-211ENST00000580991 DCTN1Q14203 1278 aa19.56■□□□□ 0.72
IFT20-211ENST00000580991 SUSD4Q5VX71 490 aa19.56■□□□□ 0.72
IFT20-211ENST00000580991 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
IFT20-211ENST00000580991 RTFDC1Q9BY42 306 aaPredicted RBP19.56■□□□□ 0.72
IFT20-211ENST00000580991 NUDCQ9Y266 331 aa19.56■□□□□ 0.72
IFT20-211ENST00000580991 HIRAP54198 1017 aaPredicted RBP19.55■□□□□ 0.72
IFT20-211ENST00000580991 HUNKP57058 714 aa19.55■□□□□ 0.72
IFT20-211ENST00000580991 TNIP1Q15025 636 aa19.55■□□□□ 0.72
IFT20-211ENST00000580991 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
IFT20-211ENST00000580991 NLRP3Q96P20 1036 aa19.55■□□□□ 0.72
IFT20-211ENST00000580991 ZIC5Q96T25 663 aa19.55■□□□□ 0.72
IFT20-211ENST00000580991 NTSR2O95665 410 aa19.54■□□□□ 0.72
IFT20-211ENST00000580991 C3orf67Q6ZVT6 689 aa19.54■□□□□ 0.72
IFT20-211ENST00000580991 PPP1R42Q7Z4L9 355 aa19.54■□□□□ 0.72
IFT20-211ENST00000580991 ZNF34Q8IZ26 560 aa19.54■□□□□ 0.72
IFT20-211ENST00000580991 ZBTB3Q9H5J0 574 aa19.54■□□□□ 0.72
IFT20-211ENST00000580991 RRP7AQ9Y3A4 280 aaKnown RBP19.54■□□□□ 0.72
IFT20-211ENST00000580991 U2AF1L5P0DN76 240 aaPredicted RBP19.53■□□□□ 0.72
IFT20-211ENST00000580991 U2AF1Q01081 240 aaKnown RBP eCLIP19.53■□□□□ 0.72
IFT20-211ENST00000580991 SAGE1Q9NXZ1 904 aa19.53■□□□□ 0.72
IFT20-211ENST00000580991 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
IFT20-211ENST00000580991 RAD17O75943 681 aa19.52■□□□□ 0.72
IFT20-211ENST00000580991 SOX10P56693 466 aa19.52■□□□□ 0.72
IFT20-211ENST00000580991 KIAA2012Q0VF49 1180 aa19.52■□□□□ 0.72
IFT20-211ENST00000580991 DPP8Q6V1X1 898 aaPredicted RBP19.52■□□□□ 0.72
IFT20-211ENST00000580991 TRPM4Q8TD43 1214 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms