RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 RGL2O15211 777 aa22.44■■□□□ 1.18
EIF4A1-216ENST00000580888 PDZRN3Q9UPQ7 1066 aa22.44■■□□□ 1.18
EIF4A1-216ENST00000580888 ARFGEF2Q9Y6D5 1785 aa22.43■■□□□ 1.18
EIF4A1-216ENST00000580888 KIF3CO14782 793 aa22.43■■□□□ 1.18
EIF4A1-216ENST00000580888 NPM2Q86SE8 214 aaKnown RBP22.43■■□□□ 1.18
EIF4A1-216ENST00000580888 ZNF330Q9Y3S2 320 aaPredicted RBP22.43■■□□□ 1.18
EIF4A1-216ENST00000580888 C9orf131Q5VYM1 1079 aa22.42■■□□□ 1.18
EIF4A1-216ENST00000580888 BICDL1Q6ZP65 573 aa22.42■■□□□ 1.18
EIF4A1-216ENST00000580888 G2E3Q7L622 706 aa22.42■■□□□ 1.18
EIF4A1-216ENST00000580888 DZIP3Q86Y13 1208 aaKnown RBP22.42■■□□□ 1.18
EIF4A1-216ENST00000580888 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
EIF4A1-216ENST00000580888 CEP350Q5VT06 3117 aa22.42■■□□□ 1.18
EIF4A1-216ENST00000580888 PRR5LQ6MZQ0 368 aa22.41■■□□□ 1.18
EIF4A1-216ENST00000580888 CLEC4GQ6UXB4 293 aa22.41■■□□□ 1.18
EIF4A1-216ENST00000580888 C2CD5Q86YS7 1000 aa22.41■■□□□ 1.18
EIF4A1-216ENST00000580888 BRIP1Q9BX63 1249 aa22.41■■□□□ 1.18
EIF4A1-216ENST00000580888 H0YIN7 160 aa22.4■■□□□ 1.18
EIF4A1-216ENST00000580888 SMC5Q8IY18 1101 aa22.4■■□□□ 1.18
EIF4A1-216ENST00000580888 TTLL6Q8N841 843 aa22.4■■□□□ 1.18
EIF4A1-216ENST00000580888 SETDB2Q96T68 719 aa22.4■■□□□ 1.18
EIF4A1-216ENST00000580888 FER1L6Q2WGJ9 1857 aa22.4■■□□□ 1.18
EIF4A1-216ENST00000580888 DICER1Q9UPY3 1922 aaKnown RBP22.39■■□□□ 1.18
EIF4A1-216ENST00000580888 NBPF26B4DH59 902 aa22.39■■□□□ 1.17
EIF4A1-216ENST00000580888 NBPF10Q6P3W6 841 aaKnown RBP22.39■■□□□ 1.17
EIF4A1-216ENST00000580888 NBPF15Q8N660 670 aa22.39■■□□□ 1.17
EIF4A1-216ENST00000580888 TNRC6CQ9HCJ0 1690 aaKnown RBP22.39■■□□□ 1.17
EIF4A1-216ENST00000580888 CACNA1SQ13698 1873 aa22.39■■□□□ 1.17
EIF4A1-216ENST00000580888 NUP98P52948 1817 aa22.38■■□□□ 1.17
EIF4A1-216ENST00000580888 PDE6BP35913 854 aa22.38■■□□□ 1.17
EIF4A1-216ENST00000580888 PIP4K2AP48426 406 aaPredicted RBP22.38■■□□□ 1.17
EIF4A1-216ENST00000580888 SKAP1Q86WV1 359 aa22.38■■□□□ 1.17
EIF4A1-216ENST00000580888 ZC3H4Q9UPT8 1303 aaKnown RBP22.37■■□□□ 1.17
EIF4A1-216ENST00000580888 FLIIQ13045 1269 aa22.37■■□□□ 1.17
EIF4A1-216ENST00000580888 HDGFL1Q5TGJ6 251 aa22.37■■□□□ 1.17
EIF4A1-216ENST00000580888 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
EIF4A1-216ENST00000580888 CNBD1Q8NA66 436 aa22.36■■□□□ 1.17
EIF4A1-216ENST00000580888 RNF181Q9P0P0 153 aa22.36■■□□□ 1.17
EIF4A1-216ENST00000580888 ZNF652Q9Y2D9 606 aa22.36■■□□□ 1.17
EIF4A1-216ENST00000580888 TIAM2Q8IVF5 1701 aa22.36■■□□□ 1.17
EIF4A1-216ENST00000580888 BACH2Q9BYV9 841 aa22.35■■□□□ 1.17
EIF4A1-216ENST00000580888 SLX4Q8IY92 1834 aa22.35■■□□□ 1.17
EIF4A1-216ENST00000580888 PDE4AP27815 886 aa22.34■■□□□ 1.17
EIF4A1-216ENST00000580888 HSPA6P17066 643 aa22.33■■□□□ 1.17
EIF4A1-216ENST00000580888 ST5P78524 1137 aa22.33■■□□□ 1.17
EIF4A1-216ENST00000580888 LMNB1P20700 586 aa22.32■■□□□ 1.16
EIF4A1-216ENST00000580888 RASSF7Q02833 373 aa22.32■■□□□ 1.16
EIF4A1-216ENST00000580888 STYK1Q6J9G0 422 aa22.32■■□□□ 1.16
EIF4A1-216ENST00000580888 SIRT2Q8IXJ6 389 aa22.32■■□□□ 1.16
EIF4A1-216ENST00000580888 NMRK2Q9NPI5 230 aa22.32■■□□□ 1.16
EIF4A1-216ENST00000580888 NFKBIEO00221 500 aa22.31■■□□□ 1.16
EIF4A1-216ENST00000580888 TOMM70O94826 608 aa22.31■■□□□ 1.16
EIF4A1-216ENST00000580888 PRELPP51888 382 aa22.31■■□□□ 1.16
EIF4A1-216ENST00000580888 CCDC24Q8N4L8 307 aa22.31■■□□□ 1.16
EIF4A1-216ENST00000580888 SRGNP10124 158 aa22.3■■□□□ 1.16
EIF4A1-216ENST00000580888 ZNF622Q969S3 477 aaKnown RBP eCLIP22.3■■□□□ 1.16
EIF4A1-216ENST00000580888 ERBB4Q15303 1308 aa22.3■■□□□ 1.16
EIF4A1-216ENST00000580888 KLRG2A4D1S0 409 aaPredicted RBP22.29■■□□□ 1.16
EIF4A1-216ENST00000580888 NBPF5PQ86XG9 351 aaPredicted RBP22.29■■□□□ 1.16
EIF4A1-216ENST00000580888 RPAP2Q8IXW5 612 aaPredicted RBP22.29■■□□□ 1.16
EIF4A1-216ENST00000580888 CNKSR1Q969H4 720 aa22.29■■□□□ 1.16
EIF4A1-216ENST00000580888 GCC1Q96CN9 775 aa22.29■■□□□ 1.16
EIF4A1-216ENST00000580888 DBF4Q9UBU7 674 aaPredicted RBP22.29■■□□□ 1.16
EIF4A1-216ENST00000580888 ERVV-1B6SEH8 477 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 F6X3S4 739 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 FKBP5Q13451 457 aaPredicted RBP22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 ANKRD44Q8N8A2 993 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 NECTIN2Q92692 538 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 MASTLQ96GX5 879 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 CHPF2Q9P2E5 772 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 NIP7Q9Y221 180 aaKnown RBP eCLIP22.28■■□□□ 1.161e-323■■■□□ 14.6
EIF4A1-216ENST00000580888 LTBP3Q9NS15 1303 aa22.28■■□□□ 1.16
EIF4A1-216ENST00000580888 NPHP1O15259 732 aa22.27■■□□□ 1.16
EIF4A1-216ENST00000580888 NUCB1Q02818 461 aa22.27■■□□□ 1.16
EIF4A1-216ENST00000580888 HLFQ16534 295 aa22.27■■□□□ 1.16
EIF4A1-216ENST00000580888 TPTE2Q6XPS3 522 aa22.27■■□□□ 1.16
EIF4A1-216ENST00000580888 RBM46Q8TBY0 533 aaKnown RBP22.27■■□□□ 1.16
EIF4A1-216ENST00000580888 PHAXQ9H814 394 aaKnown RBP22.27■■□□□ 1.16
EIF4A1-216ENST00000580888 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
EIF4A1-216ENST00000580888 RGS3P49796 1198 aa22.26■■□□□ 1.15
EIF4A1-216ENST00000580888 MEIS3Q99687 375 aa22.26■■□□□ 1.15
EIF4A1-216ENST00000580888 MAP3K15Q6ZN16 1313 aa22.26■■□□□ 1.15
EIF4A1-216ENST00000580888 IBTKQ9P2D0 1353 aaPredicted RBP22.25■■□□□ 1.15
EIF4A1-216ENST00000580888 C21orf2O43822 256 aa22.25■■□□□ 1.15
EIF4A1-216ENST00000580888 FAM161AQ3B820 660 aa22.25■■□□□ 1.15
EIF4A1-216ENST00000580888 C1orf115Q9H7X2 142 aa22.25■■□□□ 1.15
EIF4A1-216ENST00000580888 WDR90Q96KV7 1748 aa22.24■■□□□ 1.15
EIF4A1-216ENST00000580888 PDIA6Q15084 440 aa22.24■■□□□ 1.15
EIF4A1-216ENST00000580888 C8orf34Q49A92 452 aa22.24■■□□□ 1.15
EIF4A1-216ENST00000580888 SOGA3Q5TF21 947 aa22.24■■□□□ 1.15
EIF4A1-216ENST00000580888 PRPF40BQ6NWY9 871 aaKnown RBP22.24■■□□□ 1.15
EIF4A1-216ENST00000580888 CEP85Q6P2H3 762 aa22.24■■□□□ 1.15
EIF4A1-216ENST00000580888 DDX21Q9NR30 783 aaKnown RBP eCLIP22.24■■□□□ 1.155e-7■□□□□ 10.1
EIF4A1-216ENST00000580888 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
EIF4A1-216ENST00000580888 GLTPD2A6NH11 291 aa22.23■■□□□ 1.15
EIF4A1-216ENST00000580888 NPR1P16066 1061 aa22.23■■□□□ 1.15
EIF4A1-216ENST00000580888 C7orf43Q8WVR3 580 aa22.23■■□□□ 1.15
EIF4A1-216ENST00000580888 DCTPP1Q9H773 170 aa22.23■■□□□ 1.15
EIF4A1-216ENST00000580888 HYPKQ9NX55 129 aa22.23■■□□□ 1.15
EIF4A1-216ENST00000580888 ANKRD36CQ5JPF3 1778 aa22.22■■□□□ 1.15
EIF4A1-216ENST00000580888 GNAI3P08754 354 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms