RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PLBD2Q8NHP8 589 aa26.01■■□□□ 1.75
SMG8-204ENST00000580498 RBM17Q96I25 401 aaKnown RBP26.01■■□□□ 1.75
SMG8-204ENST00000580498 CCDC88AQ3V6T2 1871 aa26■■□□□ 1.75
SMG8-204ENST00000580498 ANKRD36CQ5JPF3 1778 aa26■■□□□ 1.75
SMG8-204ENST00000580498 NFKBIEO00221 500 aa26■■□□□ 1.75
SMG8-204ENST00000580498 GOLGA2Q08379 1002 aa26■■□□□ 1.75
SMG8-204ENST00000580498 TCIRG1Q13488 830 aa26■■□□□ 1.75
SMG8-204ENST00000580498 ANKRD13DQ6ZTN6 518 aa26■■□□□ 1.75
SMG8-204ENST00000580498 NTSR2O95665 410 aa25.99■■□□□ 1.75
SMG8-204ENST00000580498 CCDC30Q5VVM6 783 aa25.99■■□□□ 1.75
SMG8-204ENST00000580498 CC2D2BQ6DHV5 1058 aa25.99■■□□□ 1.75
SMG8-204ENST00000580498 FER1L6Q2WGJ9 1857 aa25.99■■□□□ 1.75
SMG8-204ENST00000580498 ABCC12Q96J65 1359 aa25.98■■□□□ 1.75
SMG8-204ENST00000580498 TOMM70O94826 608 aa25.98■■□□□ 1.75
SMG8-204ENST00000580498 CRY2Q49AN0 593 aa25.98■■□□□ 1.75
SMG8-204ENST00000580498 GRIPAP1Q4V328 841 aa25.98■■□□□ 1.75
SMG8-204ENST00000580498 ELL2O00472 640 aaPredicted RBP25.97■■□□□ 1.75
SMG8-204ENST00000580498 KIF3CO14782 793 aa25.97■■□□□ 1.75
SMG8-204ENST00000580498 TRMT112Q9UI30 125 aaKnown RBP25.97■■□□□ 1.75
SMG8-204ENST00000580498 TNRC6CQ9HCJ0 1690 aaKnown RBP25.96■■□□□ 1.75
SMG8-204ENST00000580498 IL16Q14005 1332 aa25.96■■□□□ 1.75
SMG8-204ENST00000580498 DDX58O95786 925 aaKnown RBP25.96■■□□□ 1.75
SMG8-204ENST00000580498 RIC3Q7Z5B4 369 aa25.96■■□□□ 1.75
SMG8-204ENST00000580498 WWC1Q8IX03 1113 aa25.96■■□□□ 1.75
SMG8-204ENST00000580498 NMRK2Q9NPI5 230 aa25.96■■□□□ 1.75
SMG8-204ENST00000580498 TIAM2Q8IVF5 1701 aa25.96■■□□□ 1.75
SMG8-204ENST00000580498 SH3TC1Q8TE82 1336 aa25.95■■□□□ 1.75
SMG8-204ENST00000580498 GLTPD2A6NH11 291 aa25.95■■□□□ 1.74
SMG8-204ENST00000580498 NLRP10Q86W26 655 aa25.95■■□□□ 1.74
SMG8-204ENST00000580498 STK31Q9BXU1 1019 aa25.95■■□□□ 1.74
SMG8-204ENST00000580498 HSP90B1P14625 803 aaKnown RBP25.94■■□□□ 1.74
SMG8-204ENST00000580498 HOXA10P31260 410 aaPredicted RBP25.94■■□□□ 1.74
SMG8-204ENST00000580498 FKBP4Q02790 459 aaKnown RBP eCLIP25.94■■□□□ 1.74
SMG8-204ENST00000580498 CRAMP1Q96RY5 1269 aa25.94■■□□□ 1.74
SMG8-204ENST00000580498 DICER1Q9UPY3 1922 aaKnown RBP25.94■■□□□ 1.74
SMG8-204ENST00000580498 SLC10A5Q5PT55 438 aa25.93■■□□□ 1.74
SMG8-204ENST00000580498 FAM9BQ8IZU0 186 aa25.92■■□□□ 1.74
SMG8-204ENST00000580498 RRAGCQ9HB90 399 aa25.92■■□□□ 1.74
SMG8-204ENST00000580498 VEGFAP15692 232 aaPredicted RBP25.91■■□□□ 1.74
SMG8-204ENST00000580498 C7orf43Q8WVR3 580 aa25.91■■□□□ 1.74
SMG8-204ENST00000580498 PPEF1O14829 653 aaPredicted RBP25.9■■□□□ 1.74
SMG8-204ENST00000580498 WDR63Q8IWG1 891 aa25.9■■□□□ 1.74
SMG8-204ENST00000580498 C8orf58Q8NAV2 365 aa25.9■■□□□ 1.74
SMG8-204ENST00000580498 RBM46Q8TBY0 533 aaKnown RBP25.9■■□□□ 1.74
SMG8-204ENST00000580498 DDX46Q7L014 1031 aaKnown RBP25.89■■□□□ 1.74
SMG8-204ENST00000580498 TSR2Q969E8 191 aaKnown RBP25.89■■□□□ 1.74
SMG8-204ENST00000580498 HSPA6P17066 643 aa25.88■■□□□ 1.73
SMG8-204ENST00000580498 SALL2Q9Y467 1007 aaPredicted RBP25.88■■□□□ 1.73
SMG8-204ENST00000580498 PRELPP51888 382 aa25.87■■□□□ 1.73
SMG8-204ENST00000580498 TWISTNBQ3B726 338 aaPredicted RBP25.87■■□□□ 1.73
SMG8-204ENST00000580498 JDP2Q8WYK2 163 aa25.87■■□□□ 1.73
SMG8-204ENST00000580498 PSMD1Q99460 953 aa25.87■■□□□ 1.73
SMG8-204ENST00000580498 ISCA1Q9BUE6 129 aa25.87■■□□□ 1.73
SMG8-204ENST00000580498 ATP5J2-PTCD1G3V325 749 aa25.86■■□□□ 1.73
SMG8-204ENST00000580498 HCLS1P14317 486 aaPredicted RBP25.86■■□□□ 1.73
SMG8-204ENST00000580498 FSTL1Q12841 308 aa25.86■■□□□ 1.73
SMG8-204ENST00000580498 SYNE4Q8N205 404 aa25.86■■□□□ 1.73
SMG8-204ENST00000580498 BBOX1O75936 387 aa25.85■■□□□ 1.73
SMG8-204ENST00000580498 IARSP41252 1262 aaKnown RBP25.85■■□□□ 1.73
SMG8-204ENST00000580498 TRIM28Q13263 835 aaKnown RBP25.85■■□□□ 1.73
SMG8-204ENST00000580498 ZNF277Q9NRM2 450 aaPredicted RBP25.85■■□□□ 1.73
SMG8-204ENST00000580498 NEXNQ0ZGT2 675 aa25.84■■□□□ 1.73
SMG8-204ENST00000580498 TMC4Q7Z404 712 aa25.84■■□□□ 1.73
SMG8-204ENST00000580498 SMC1BQ8NDV3 1235 aa25.84■■□□□ 1.73
SMG8-204ENST00000580498 SUPT20HQ8NEM7 779 aa25.84■■□□□ 1.73
SMG8-204ENST00000580498 MYH16Q9H6N6 1097 aa25.84■■□□□ 1.73
SMG8-204ENST00000580498 PHAXQ9H814 394 aaKnown RBP25.84■■□□□ 1.73
SMG8-204ENST00000580498 IQCA1LA6NCM1 817 aa25.83■■□□□ 1.73
SMG8-204ENST00000580498 TCERG1O14776 1098 aaKnown RBP25.83■■□□□ 1.73
SMG8-204ENST00000580498 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
SMG8-204ENST00000580498 CCDC191Q8NCU4 936 aa25.82■■□□□ 1.72
SMG8-204ENST00000580498 MYD88Q99836 296 aa25.82■■□□□ 1.72
SMG8-204ENST00000580498 ATP6V0A2Q9Y487 856 aa25.82■■□□□ 1.72
SMG8-204ENST00000580498 ABCC4O15439 1325 aa25.82■■□□□ 1.72
SMG8-204ENST00000580498 APLP1P51693 650 aa25.81■■□□□ 1.72
SMG8-204ENST00000580498 OLFM4Q6UX06 510 aa25.81■■□□□ 1.72
SMG8-204ENST00000580498 FAM89AQ96GI7 184 aa25.81■■□□□ 1.72
SMG8-204ENST00000580498 FANCIQ9NVI1 1328 aa25.81■■□□□ 1.72
SMG8-204ENST00000580498 EIF6P56537 245 aaKnown RBP25.8■■□□□ 1.72
SMG8-204ENST00000580498 GRAPQ13588 217 aa25.8■■□□□ 1.72
SMG8-204ENST00000580498 C3orf67Q6ZVT6 689 aa25.8■■□□□ 1.72
SMG8-204ENST00000580498 ZBTB38Q8NAP3 1195 aaPredicted RBP25.8■■□□□ 1.72
SMG8-204ENST00000580498 GRAPLQ8TC17 118 aaPredicted RBP25.8■■□□□ 1.72
SMG8-204ENST00000580498 CWC25Q9NXE8 425 aaPredicted RBP25.8■■□□□ 1.72
SMG8-204ENST00000580498 WDR90Q96KV7 1748 aa25.8■■□□□ 1.72
SMG8-204ENST00000580498 IRS4O14654 1257 aaPredicted RBP25.79■■□□□ 1.72
SMG8-204ENST00000580498 LARGE2Q8N3Y3 721 aa25.79■■□□□ 1.72
SMG8-204ENST00000580498 METTL22Q9BUU2 404 aaPredicted RBP25.79■■□□□ 1.72
SMG8-204ENST00000580498 VPS33BQ9H267 617 aa25.79■■□□□ 1.72
SMG8-204ENST00000580498 LAMB2P55268 1798 aa25.79■■□□□ 1.72
SMG8-204ENST00000580498 KSR2Q6VAB6 950 aa25.78■■□□□ 1.72
SMG8-204ENST00000580498 SP8Q8IXZ3 490 aa25.78■■□□□ 1.72
SMG8-204ENST00000580498 MAP3K2Q9Y2U5 619 aa25.78■■□□□ 1.72
SMG8-204ENST00000580498 CACNA1FO60840 1977 aa25.77■■□□□ 1.72
SMG8-204ENST00000580498 DDNO94850 711 aaPredicted RBP25.77■■□□□ 1.72
SMG8-204ENST00000580498 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
SMG8-204ENST00000580498 RTL5Q5HYW3 569 aaPredicted RBP25.77■■□□□ 1.72
SMG8-204ENST00000580498 DPP8Q6V1X1 898 aaPredicted RBP25.77■■□□□ 1.72
SMG8-204ENST00000580498 NIM1KQ8IY84 436 aa25.77■■□□□ 1.72
SMG8-204ENST00000580498 SF3B3Q15393 1217 aaKnown RBP25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms