RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 LY75O60449 1722 aa18.29■□□□□ 0.52
CDK5RAP3-218ENST00000580391 GIGYF2Q6Y7W6 1299 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-218ENST00000580391 TBC1D9Q6ZT07 1266 aa18.29■□□□□ 0.52
CDK5RAP3-218ENST00000580391 KLHDC4Q8TBB5 520 aa18.29■□□□□ 0.52
CDK5RAP3-218ENST00000580391 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 CDC45O75419 566 aa18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 SDSP20132 328 aa18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 SIL1Q9H173 461 aa18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 UPF2Q9HAU5 1272 aaKnown RBP18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
CDK5RAP3-218ENST00000580391 EIF5P55010 431 aaKnown RBP18.27■□□□□ 0.52
CDK5RAP3-218ENST00000580391 FOXO4P98177 505 aa18.27■□□□□ 0.52
CDK5RAP3-218ENST00000580391 RFX5P48382 616 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 SEPT12Q8IYM1 358 aa18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 TBC1D32Q96NH3 1257 aa18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 STAP2Q9UGK3 403 aa18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 GPTP24298 496 aa18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 LMBR1LQ6UX01 489 aa18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-218ENST00000580391 EP400Q96L91 3159 aa18.25■□□□□ 0.51
CDK5RAP3-218ENST00000580391 SASH1O94885 1247 aa18.25■□□□□ 0.51
CDK5RAP3-218ENST00000580391 AOX1Q06278 1338 aa18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 KCNQ4P56696 695 aa18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 PTPN12Q05209 780 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 G3BP1Q13283 466 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 QTRT2Q9H974 415 aaKnown RBP18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 HSP90AB3PQ58FF7 597 aa18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 COPRSQ9NQ92 184 aa18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 SCN7AQ01118 1682 aa18.24■□□□□ 0.51
CDK5RAP3-218ENST00000580391 ERVV-1B6SEH8 477 aa18.23■□□□□ 0.51
CDK5RAP3-218ENST00000580391 NLRP10Q86W26 655 aa18.23■□□□□ 0.51
CDK5RAP3-218ENST00000580391 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-218ENST00000580391 CHMP3Q9Y3E7 222 aa18.23■□□□□ 0.51
CDK5RAP3-218ENST00000580391 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
CDK5RAP3-218ENST00000580391 FAM89AQ96GI7 184 aa18.22■□□□□ 0.51
CDK5RAP3-218ENST00000580391 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
CDK5RAP3-218ENST00000580391 PI4K2BQ8TCG2 481 aa18.22■□□□□ 0.51
CDK5RAP3-218ENST00000580391 DDRGK1Q96HY6 314 aa18.22■□□□□ 0.51
CDK5RAP3-218ENST00000580391 ZBTB38Q8NAP3 1195 aaPredicted RBP18.21■□□□□ 0.51
CDK5RAP3-218ENST00000580391 C22orf23Q9BZE7 217 aa18.21■□□□□ 0.51
CDK5RAP3-218ENST00000580391 LAMB2P55268 1798 aa18.21■□□□□ 0.51
CDK5RAP3-218ENST00000580391 SYNE4Q8N205 404 aa18.21■□□□□ 0.5
CDK5RAP3-218ENST00000580391 DDX60Q8IY21 1712 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-218ENST00000580391 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
CDK5RAP3-218ENST00000580391 AACSQ86V21 672 aa18.2■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CASZ1Q86V15 1759 aa18.2■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
CDK5RAP3-218ENST00000580391 EAF2Q96CJ1 260 aaPredicted RBP18.19■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
CDK5RAP3-218ENST00000580391 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
CDK5RAP3-218ENST00000580391 PLA2G12BQ9BX93 195 aa18.19■□□□□ 0.5
CDK5RAP3-218ENST00000580391 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-218ENST00000580391 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
CDK5RAP3-218ENST00000580391 C4BP0C0L5 1744 aa18.18■□□□□ 0.5
CDK5RAP3-218ENST00000580391 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
CDK5RAP3-218ENST00000580391 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-218ENST00000580391 TTC41PQ6P2S7 1318 aa18.18■□□□□ 0.5
CDK5RAP3-218ENST00000580391 MAP4K4O95819 1239 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 RILPL2Q969X0 211 aa18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 TFCP2Q12800 502 aa18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CCDC85AQ96PX6 553 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
CDK5RAP3-218ENST00000580391 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 SMIM5Q71RC9 77 aa18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 ATG9AQ7Z3C6 839 aa18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 ECHDC1Q9NTX5 307 aa18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 SPEF2Q9C093 1822 aa18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
CDK5RAP3-218ENST00000580391 IRS4O14654 1257 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-218ENST00000580391 GLRX3O76003 335 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-218ENST00000580391 SLC4A3P48751 1232 aa18.14■□□□□ 0.49
CDK5RAP3-218ENST00000580391 TNNI3KQ59H18 835 aa18.14■□□□□ 0.49
CDK5RAP3-218ENST00000580391 SUSD4Q5VX71 490 aa18.14■□□□□ 0.49
CDK5RAP3-218ENST00000580391 FPGT-TNNI3KV9GXZ4 949 aa18.14■□□□□ 0.49
CDK5RAP3-218ENST00000580391 FAM177BA6PVY3 158 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ERC2O15083 957 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CSF1RP07333 972 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 FBXO41Q8TF61 875 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 LRP5O75197 1615 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CTSWP56202 376 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CCDC57Q2TAC2 916 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 KRT27Q7Z3Y8 459 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 PUS3Q9BZE2 481 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 ZNF609O15014 1411 aa18.13■□□□□ 0.49
CDK5RAP3-218ENST00000580391 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
CDK5RAP3-218ENST00000580391 EYA2O00167 538 aa18.12■□□□□ 0.49
CDK5RAP3-218ENST00000580391 CHMLP26374 656 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms