RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SENP3-EIF4A1A0A087X0R7 540 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 TMEM229AB2RXF0 380 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 ITGA6P23229 1130 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 WDR44Q5JSH3 913 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 OGFOD1Q8N543 542 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 TIMMDC1Q9NPL8 285 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 RTEL1-TNFRSF6BF6WH68 1400 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 KDM5DQ9BY66 1539 aa10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 FAM135AQ9P2D6 1515 aa10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 LMOD1P29536 600 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 SMTNP53814 917 aa10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 LCE2AQ5TA79 106 aaPredicted RBP10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 TPCN2Q8NHX9 752 aa10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 FAM135BQ49AJ0 1406 aa10.38□□□□□ -0.75
PPP4R1-216ENST00000580283 WASHC2CQ9Y4E1 1318 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 CDC14CA4D256 554 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 RASA1P20936 1047 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 LTKP29376 864 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 PHKA2P46019 1235 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 PPARGC1BQ86YN6 1023 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 RHBDD1Q8TEB9 315 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 GAS2L1Q99501 681 aaPredicted RBP10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 DYRK1BQ9Y463 629 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 ROBO1Q9Y6N7 1651 aa10.37□□□□□ -0.75
PPP4R1-216ENST00000580283 ERBB4Q15303 1308 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 CLDN10P78369 228 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 RIPOR1Q6ZS17 1223 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 ZNF594Q96JF6 807 aaPredicted RBP10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 SLC4A9Q96Q91 983 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 ZNF358Q9NW07 568 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 NCOA2Q15596 1464 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
PPP4R1-216ENST00000580283 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
PPP4R1-216ENST00000580283 A6NJY4 79 aa10.35□□□□□ -0.75
PPP4R1-216ENST00000580283 VSIG8P0DPA2 414 aa10.35□□□□□ -0.75
PPP4R1-216ENST00000580283 C4orf17Q53FE4 359 aa10.35□□□□□ -0.75
PPP4R1-216ENST00000580283 LARP1Q6PKG0 1096 aaKnown RBP10.35□□□□□ -0.75
PPP4R1-216ENST00000580283 ZBTB7BO15156 539 aaPredicted RBP10.34□□□□□ -0.75
PPP4R1-216ENST00000580283 GMPRP36959 345 aa10.34□□□□□ -0.75
PPP4R1-216ENST00000580283 SV2AQ7L0J3 742 aa10.34□□□□□ -0.75
PPP4R1-216ENST00000580283 VWA5B2Q8N398 1253 aa10.34□□□□□ -0.75
PPP4R1-216ENST00000580283 VRTNQ9H8Y1 702 aa10.34□□□□□ -0.75
PPP4R1-216ENST00000580283 KIAA1024Q9UPX6 916 aa10.34□□□□□ -0.75
PPP4R1-216ENST00000580283 LCE2CQ5TA81 110 aa10.33□□□□□ -0.76
PPP4R1-216ENST00000580283 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-216ENST00000580283 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
PPP4R1-216ENST00000580283 ARHGAP23Q9P227 1491 aa10.33□□□□□ -0.76
PPP4R1-216ENST00000580283 A0A1B0GTH6 734 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 H7C1W4 665 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 CDK2AP1O14519 115 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 F11P03951 625 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 RFX1P22670 979 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 MTFR1Q15390 333 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 SIX5Q8N196 739 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 CEP152O94986 1710 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 ABCC3O15438 1527 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 MAP3K1Q13233 1512 aa10.32□□□□□ -0.76
PPP4R1-216ENST00000580283 ERVK-7P63135 1459 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 SCAF11Q99590 1463 aaKnown RBP10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 PHLPP1O60346 1717 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 WIPF1O43516 503 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 ERICH6Q7L0X2 663 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 GPAMQ9HCL2 828 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 SLIT1O75093 1534 aa10.31□□□□□ -0.76
PPP4R1-216ENST00000580283 MROH1Q8NDA8 1641 aa10.3□□□□□ -0.76
PPP4R1-216ENST00000580283 KANK4Q5T7N3 995 aaPredicted RBP10.3□□□□□ -0.76
PPP4R1-216ENST00000580283 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
PPP4R1-216ENST00000580283 TMEM94Q12767 1356 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 CSB-PGBD3P0DP91 1061 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 FOXR1Q6PIV2 292 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 TXNDC2Q86VQ3 553 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 TNS4Q8IZW8 715 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 PGBD3Q8N328 593 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 AIDAQ96BJ3 306 aa10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 SCHIP1Q9P0W5 487 aaPredicted RBP10.29□□□□□ -0.76
PPP4R1-216ENST00000580283 TET3O43151 1660 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 FAM196BA6NMK8 535 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 SFI1A8K8P3 1242 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L15C9J2P7 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L10C9JJH3 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L21D6R901 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
PPP4R1-216ENST00000580283 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms