RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 RIC1Q4ADV7 1423 aa14.04□□□□□ -0.16
NDEL1-208ENST00000580237 C21orf2O43822 256 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 NTSR2O95665 410 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 RASSF7Q02833 373 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 TWISTNBQ3B726 338 aaPredicted RBP14.03□□□□□ -0.16
NDEL1-208ENST00000580237 C9orf131Q5VYM1 1079 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 RIC3Q7Z5B4 369 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 MYH16Q9H6N6 1097 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 GPBP1L1Q9HC44 474 aaPredicted RBP14.03□□□□□ -0.16
NDEL1-208ENST00000580237 RNF181Q9P0P0 153 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 RNF123Q5XPI4 1314 aa14.03□□□□□ -0.16
NDEL1-208ENST00000580237 DDX60Q8IY21 1712 aaKnown RBP14.03□□□□□ -0.16
NDEL1-208ENST00000580237 DDX58O95786 925 aaKnown RBP14.02□□□□□ -0.17
NDEL1-208ENST00000580237 TCIRG1Q13488 830 aa14.02□□□□□ -0.17
NDEL1-208ENST00000580237 SOGA3Q5TF21 947 aa14.02□□□□□ -0.17
NDEL1-208ENST00000580237 TSPYL6Q8N831 410 aa14.02□□□□□ -0.17
NDEL1-208ENST00000580237 CCER2I3L3R5 266 aa14.01□□□□□ -0.17
NDEL1-208ENST00000580237 NLRP10Q86W26 655 aa14.01□□□□□ -0.17
NDEL1-208ENST00000580237 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
NDEL1-208ENST00000580237 TRMT112Q9UI30 125 aaKnown RBP14.01□□□□□ -0.17
NDEL1-208ENST00000580237 MYH3P11055 1940 aa14□□□□□ -0.17
NDEL1-208ENST00000580237 SH3TC1Q8TE82 1336 aa14□□□□□ -0.17
NDEL1-208ENST00000580237 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
NDEL1-208ENST00000580237 ZNF428Q96B54 188 aa14□□□□□ -0.17
NDEL1-208ENST00000580237 TAOK3Q9H2K8 898 aa14□□□□□ -0.17
NDEL1-208ENST00000580237 ATP5J2-PTCD1G3V325 749 aa13.99□□□□□ -0.17
NDEL1-208ENST00000580237 LMNB1P20700 586 aa13.99□□□□□ -0.17
NDEL1-208ENST00000580237 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
NDEL1-208ENST00000580237 CCDC93Q567U6 631 aa13.99□□□□□ -0.17
NDEL1-208ENST00000580237 NLRP3Q96P20 1036 aa13.99□□□□□ -0.17
NDEL1-208ENST00000580237 TAF1P21675 1872 aa13.98□□□□□ -0.17
NDEL1-208ENST00000580237 KLRG2A4D1S0 409 aaPredicted RBP13.98□□□□□ -0.17
NDEL1-208ENST00000580237 NFKBIEO00221 500 aa13.98□□□□□ -0.17
NDEL1-208ENST00000580237 EXOSC9Q06265 439 aaKnown RBP13.98□□□□□ -0.17
NDEL1-208ENST00000580237 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
NDEL1-208ENST00000580237 DIEXFQ68CQ4 756 aaKnown RBP13.98□□□□□ -0.17
NDEL1-208ENST00000580237 RBM17Q96I25 401 aaKnown RBP13.98□□□□□ -0.17
NDEL1-208ENST00000580237 MYD88Q99836 296 aa13.98□□□□□ -0.17
NDEL1-208ENST00000580237 TMX4Q9H1E5 349 aaPredicted RBP13.97□□□□□ -0.17
NDEL1-208ENST00000580237 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.17
NDEL1-208ENST00000580237 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.17
NDEL1-208ENST00000580237 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
NDEL1-208ENST00000580237 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
NDEL1-208ENST00000580237 NEXNQ0ZGT2 675 aa13.96□□□□□ -0.17
NDEL1-208ENST00000580237 RTL5Q5HYW3 569 aaPredicted RBP13.96□□□□□ -0.17
NDEL1-208ENST00000580237 ISCA1Q9BUE6 129 aa13.96□□□□□ -0.17
NDEL1-208ENST00000580237 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.17
NDEL1-208ENST00000580237 LTBP3Q9NS15 1303 aa13.95□□□□□ -0.18
NDEL1-208ENST00000580237 SPEF2Q9C093 1822 aa13.95□□□□□ -0.18
NDEL1-208ENST00000580237 PPEF1O14829 653 aaPredicted RBP13.95□□□□□ -0.18
NDEL1-208ENST00000580237 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
NDEL1-208ENST00000580237 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
NDEL1-208ENST00000580237 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
NDEL1-208ENST00000580237 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 HSP90B1P14625 803 aaKnown RBP13.94□□□□□ -0.18
NDEL1-208ENST00000580237 FLIIQ13045 1269 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 SLC10A5Q5PT55 438 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 KSR2Q6VAB6 950 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
NDEL1-208ENST00000580237 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 FAM89AQ96GI7 184 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 CRAMP1Q96RY5 1269 aa13.94□□□□□ -0.18
NDEL1-208ENST00000580237 METTL22Q9BUU2 404 aaPredicted RBP13.94□□□□□ -0.18
NDEL1-208ENST00000580237 CWC25Q9NXE8 425 aaPredicted RBP13.94□□□□□ -0.18
NDEL1-208ENST00000580237 ABCC4O15439 1325 aa13.93□□□□□ -0.18
NDEL1-208ENST00000580237 ZNF521Q96K83 1311 aa13.93□□□□□ -0.18
NDEL1-208ENST00000580237 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
NDEL1-208ENST00000580237 FKBP4Q02790 459 aaKnown RBP eCLIP13.93□□□□□ -0.18
NDEL1-208ENST00000580237 OLFM4Q6UX06 510 aa13.93□□□□□ -0.18
NDEL1-208ENST00000580237 SYNE4Q8N205 404 aa13.93□□□□□ -0.18
NDEL1-208ENST00000580237 LRRC37AA6NMS7 1700 aa13.93□□□□□ -0.18
NDEL1-208ENST00000580237 E9PSI1 815 aa13.92□□□□□ -0.18
NDEL1-208ENST00000580237 IRS4O14654 1257 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-208ENST00000580237 VAMP4O75379 141 aa13.92□□□□□ -0.18
NDEL1-208ENST00000580237 TRIM28Q13263 835 aaKnown RBP13.92□□□□□ -0.18
NDEL1-208ENST00000580237 CC2D2BQ6DHV5 1058 aa13.92□□□□□ -0.18
NDEL1-208ENST00000580237 G2E3Q7L622 706 aa13.92□□□□□ -0.18
NDEL1-208ENST00000580237 C16orf71Q8IYS4 520 aaPredicted RBP13.92□□□□□ -0.18
NDEL1-208ENST00000580237 CCDC191Q8NCU4 936 aa13.92□□□□□ -0.18
NDEL1-208ENST00000580237 C7orf43Q8WVR3 580 aa13.92□□□□□ -0.18
NDEL1-208ENST00000580237 PRELPP51888 382 aa13.91□□□□□ -0.18
NDEL1-208ENST00000580237 ZBTB38Q8NAP3 1195 aaPredicted RBP13.91□□□□□ -0.18
NDEL1-208ENST00000580237 NMRK2Q9NPI5 230 aa13.91□□□□□ -0.18
NDEL1-208ENST00000580237 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
NDEL1-208ENST00000580237 PCCAP05165 728 aaPredicted RBP13.9□□□□□ -0.18
NDEL1-208ENST00000580237 C1QTNF8P60827 252 aa13.9□□□□□ -0.18
NDEL1-208ENST00000580237 GRAPQ13588 217 aa13.9□□□□□ -0.18
NDEL1-208ENST00000580237 GRIPAP1Q4V328 841 aa13.9□□□□□ -0.18
NDEL1-208ENST00000580237 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
NDEL1-208ENST00000580237 MIER1Q8N108 512 aa13.9□□□□□ -0.18
NDEL1-208ENST00000580237 GRAPLQ8TC17 118 aaPredicted RBP13.9□□□□□ -0.18
NDEL1-208ENST00000580237 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
NDEL1-208ENST00000580237 IARSP41252 1262 aaKnown RBP13.89□□□□□ -0.19
NDEL1-208ENST00000580237 CWF19L2Q2TBE0 894 aaKnown RBP13.89□□□□□ -0.19
NDEL1-208ENST00000580237 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
NDEL1-208ENST00000580237 NEURL1BA8MQ27 555 aa13.88□□□□□ -0.19
NDEL1-208ENST00000580237 BBOX1O75936 387 aa13.88□□□□□ -0.19
NDEL1-208ENST00000580237 TMC4Q7Z404 712 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms