RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MCOLN1Q9GZU1 580 aa25.88■■□□□ 1.73
LIMD2-209ENST00000580222 TLL2Q9Y6L7 1015 aa25.88■■□□□ 1.73
LIMD2-209ENST00000580222 ALDH1B1P30837 517 aa25.87■■□□□ 1.73
LIMD2-209ENST00000580222 SIPA1L3O60292 1781 aaPredicted RBP25.87■■□□□ 1.73
LIMD2-209ENST00000580222 U2SURPO15042 1029 aaKnown RBP25.86■■□□□ 1.73
LIMD2-209ENST00000580222 ZNF652Q9Y2D9 606 aa25.86■■□□□ 1.73
LIMD2-209ENST00000580222 EIF6P56537 245 aaKnown RBP25.85■■□□□ 1.73
LIMD2-209ENST00000580222 CC2D1BQ5T0F9 858 aaKnown RBP25.85■■□□□ 1.73
LIMD2-209ENST00000580222 COL3A1P02461 1466 aaPredicted RBP25.85■■□□□ 1.73
LIMD2-209ENST00000580222 ABCC12Q96J65 1359 aa25.84■■□□□ 1.73
LIMD2-209ENST00000580222 PER1O15534 1290 aaPredicted RBP25.84■■□□□ 1.73
LIMD2-209ENST00000580222 CRY2Q49AN0 593 aa25.84■■□□□ 1.73
LIMD2-209ENST00000580222 CFAP44Q96MT7 982 aa25.84■■□□□ 1.73
LIMD2-209ENST00000580222 LMOD1P29536 600 aaPredicted RBP25.83■■□□□ 1.73
LIMD2-209ENST00000580222 NUTM1Q86Y26 1132 aa25.83■■□□□ 1.73
LIMD2-209ENST00000580222 MAP2K2P36507 400 aa25.82■■□□□ 1.72
LIMD2-209ENST00000580222 USP50Q70EL3 339 aaPredicted RBP25.82■■□□□ 1.72
LIMD2-209ENST00000580222 SNRPA1P09661 255 aaKnown RBP25.81■■□□□ 1.72
LIMD2-209ENST00000580222 SAPCD2Q86UD0 394 aa25.81■■□□□ 1.72
LIMD2-209ENST00000580222 LARGE2Q8N3Y3 721 aa25.8■■□□□ 1.72
LIMD2-209ENST00000580222 ZIC5Q96T25 663 aa25.79■■□□□ 1.72
LIMD2-209ENST00000580222 TCERG1O14776 1098 aaKnown RBP25.78■■□□□ 1.72
LIMD2-209ENST00000580222 RGL2O15211 777 aa25.78■■□□□ 1.72
LIMD2-209ENST00000580222 GTF2E1P29083 439 aaPredicted RBP25.78■■□□□ 1.72
LIMD2-209ENST00000580222 CNGB1Q14028 1251 aaPredicted RBP25.78■■□□□ 1.72
LIMD2-209ENST00000580222 CELF2O95319 508 aaKnown RBP25.77■■□□□ 1.72
LIMD2-209ENST00000580222 HOXA10P31260 410 aaPredicted RBP25.77■■□□□ 1.72
LIMD2-209ENST00000580222 MCM10Q7L590 875 aa25.77■■□□□ 1.72
LIMD2-209ENST00000580222 GLIS2Q9BZE0 524 aaPredicted RBP25.77■■□□□ 1.72
LIMD2-209ENST00000580222 NPC1L1Q9UHC9 1359 aa25.77■■□□□ 1.72
LIMD2-209ENST00000580222 DGKZQ13574 1117 aa25.76■■□□□ 1.71
LIMD2-209ENST00000580222 CC2D2BQ6DHV5 1058 aa25.76■■□□□ 1.71
LIMD2-209ENST00000580222 C3orf67Q6ZVT6 689 aa25.76■■□□□ 1.71
LIMD2-209ENST00000580222 GPRC5DQ9NZD1 345 aa25.76■■□□□ 1.71
LIMD2-209ENST00000580222 PRKAR2BP31323 418 aa25.75■■□□□ 1.71
LIMD2-209ENST00000580222 CIAPIN1Q6FI81 312 aa25.75■■□□□ 1.71
LIMD2-209ENST00000580222 DCTN1Q14203 1278 aa25.74■■□□□ 1.71
LIMD2-209ENST00000580222 RSPH6AQ9H0K4 717 aa25.74■■□□□ 1.71
LIMD2-209ENST00000580222 ADARB2Q9NS39 739 aaKnown RBP25.74■■□□□ 1.71
LIMD2-209ENST00000580222 BRPF1P55201 1214 aaPredicted RBP25.73■■□□□ 1.71
LIMD2-209ENST00000580222 NGEFQ8N5V2 710 aa25.73■■□□□ 1.71
LIMD2-209ENST00000580222 CA12O43570 354 aa25.72■■□□□ 1.71
LIMD2-209ENST00000580222 HIRAP54198 1017 aaPredicted RBP25.72■■□□□ 1.71
LIMD2-209ENST00000580222 CXCL9Q07325 125 aa25.72■■□□□ 1.71
LIMD2-209ENST00000580222 AOC3Q16853 763 aa25.72■■□□□ 1.71
LIMD2-209ENST00000580222 DLK2Q6UY11 383 aa25.72■■□□□ 1.71
LIMD2-209ENST00000580222 NIM1KQ8IY84 436 aa25.72■■□□□ 1.71
LIMD2-209ENST00000580222 UBN2Q6ZU65 1347 aa25.71■■□□□ 1.71
LIMD2-209ENST00000580222 RPGRQ92834 1020 aaKnown RBP25.71■■□□□ 1.71
LIMD2-209ENST00000580222 MIS18AQ9NYP9 233 aa25.71■■□□□ 1.71
LIMD2-209ENST00000580222 PGAP2Q9UHJ9 254 aa25.71■■□□□ 1.71
LIMD2-209ENST00000580222 PPEF1O14829 653 aaPredicted RBP25.7■■□□□ 1.7
LIMD2-209ENST00000580222 PPIP5K2O43314 1243 aa25.7■■□□□ 1.7
LIMD2-209ENST00000580222 GPTP24298 496 aa25.7■■□□□ 1.7
LIMD2-209ENST00000580222 GMPSP49915 693 aaPredicted RBP25.7■■□□□ 1.7
LIMD2-209ENST00000580222 SUSD4Q5VX71 490 aa25.7■■□□□ 1.7
LIMD2-209ENST00000580222 TTLL7Q6ZT98 887 aa25.7■■□□□ 1.7
LIMD2-209ENST00000580222 HHIPL1Q96JK4 782 aa25.7■■□□□ 1.7
LIMD2-209ENST00000580222 CRAMP1Q96RY5 1269 aa25.7■■□□□ 1.7
LIMD2-209ENST00000580222 CASP8AP2Q9UKL3 1982 aa25.69■■□□□ 1.7
LIMD2-209ENST00000580222 NYXQ9GZU5 481 aa25.69■■□□□ 1.7
LIMD2-209ENST00000580222 ZNF408Q9H9D4 720 aa25.69■■□□□ 1.7
LIMD2-209ENST00000580222 SHTN1A0MZ66 631 aa25.68■■□□□ 1.7
LIMD2-209ENST00000580222 TRPM7Q96QT4 1865 aa25.68■■□□□ 1.7
LIMD2-209ENST00000580222 RIC1Q4ADV7 1423 aa25.67■■□□□ 1.7
LIMD2-209ENST00000580222 ERVV-1B6SEH8 477 aa25.66■■□□□ 1.7
LIMD2-209ENST00000580222 GRIPAP1Q4V328 841 aa25.66■■□□□ 1.7
LIMD2-209ENST00000580222 TRPM4Q8TD43 1214 aa25.66■■□□□ 1.7
LIMD2-209ENST00000580222 RBM17Q96I25 401 aaKnown RBP25.66■■□□□ 1.7
LIMD2-209ENST00000580222 ZNRF3Q9ULT6 936 aa25.66■■□□□ 1.7
LIMD2-209ENST00000580222 MAP3K15Q6ZN16 1313 aa25.65■■□□□ 1.7
LIMD2-209ENST00000580222 SOX10P56693 466 aa25.65■■□□□ 1.7
LIMD2-209ENST00000580222 PDE4DIPQ5VU43 2346 aa25.64■■□□□ 1.69
LIMD2-209ENST00000580222 NTSR2O95665 410 aa25.63■■□□□ 1.69
LIMD2-209ENST00000580222 RTF1Q92541 710 aaKnown RBP25.63■■□□□ 1.69
LIMD2-209ENST00000580222 ZBTB3Q9H5J0 574 aa25.63■■□□□ 1.69
LIMD2-209ENST00000580222 RRP7AQ9Y3A4 280 aaKnown RBP25.63■■□□□ 1.69
LIMD2-209ENST00000580222 ATP6V0A2Q9Y487 856 aa25.63■■□□□ 1.69
LIMD2-209ENST00000580222 RAD17O75943 681 aa25.62■■□□□ 1.69
LIMD2-209ENST00000580222 USP48Q86UV5 1035 aa25.62■■□□□ 1.69
LIMD2-209ENST00000580222 ZNF34Q8IZ26 560 aa25.62■■□□□ 1.69
LIMD2-209ENST00000580222 TAF7Q15545 349 aaPredicted RBP25.61■■□□□ 1.69
LIMD2-209ENST00000580222 RTFDC1Q9BY42 306 aaPredicted RBP25.61■■□□□ 1.69
LIMD2-209ENST00000580222 FAM155AB1AL88 458 aaPredicted RBP25.6■■□□□ 1.69
LIMD2-209ENST00000580222 HUNKP57058 714 aa25.6■■□□□ 1.69
LIMD2-209ENST00000580222 NOGQ13253 232 aa25.6■■□□□ 1.69
LIMD2-209ENST00000580222 CDC37L1Q7L3B6 337 aa25.6■■□□□ 1.69
LIMD2-209ENST00000580222 ZC3H15Q8WU90 426 aaKnown RBP25.6■■□□□ 1.69
LIMD2-209ENST00000580222 IBTKQ9P2D0 1353 aaPredicted RBP25.59■■□□□ 1.69
LIMD2-209ENST00000580222 MYL6BP14649 208 aa25.59■■□□□ 1.69
LIMD2-209ENST00000580222 YDJCA8MPS7 323 aa25.58■■□□□ 1.69
LIMD2-209ENST00000580222 VPS33BQ9H267 617 aa25.58■■□□□ 1.69
LIMD2-209ENST00000580222 ABCC4O15439 1325 aa25.58■■□□□ 1.69
LIMD2-209ENST00000580222 RALBP1Q15311 655 aa25.57■■□□□ 1.68
LIMD2-209ENST00000580222 BCL2L13Q9BXK5 485 aa25.57■■□□□ 1.68
LIMD2-209ENST00000580222 CNOT7Q9UIV1 285 aaKnown RBP25.57■■□□□ 1.68
LIMD2-209ENST00000580222 U2AF1L5P0DN76 240 aaPredicted RBP25.56■■□□□ 1.68
LIMD2-209ENST00000580222 U2AF1Q01081 240 aaKnown RBP eCLIP25.56■■□□□ 1.68
LIMD2-209ENST00000580222 KIF6Q6ZMV9 814 aa25.56■■□□□ 1.68
LIMD2-209ENST00000580222 ANP32CO43423 234 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms