RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 FBLN1P23142 703 aa8.69□□□□□ -1.02
CCDC178-209ENST00000579947 ZNF333Q96JL9 665 aa8.69□□□□□ -1.02
CCDC178-209ENST00000579947 COL6A3P12111 3177 aa8.69□□□□□ -1.02
CCDC178-209ENST00000579947 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
CCDC178-209ENST00000579947 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
CCDC178-209ENST00000579947 RPTORQ8N122 1335 aa8.69□□□□□ -1.02
CCDC178-209ENST00000579947 ZBTB7BO15156 539 aaPredicted RBP8.68□□□□□ -1.02
CCDC178-209ENST00000579947 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
CCDC178-209ENST00000579947 OLFM4Q6UX06 510 aa8.68□□□□□ -1.02
CCDC178-209ENST00000579947 Q7L0L9 218 aa8.68□□□□□ -1.02
CCDC178-209ENST00000579947 CNBD1Q8NA66 436 aa8.68□□□□□ -1.02
CCDC178-209ENST00000579947 KLRG2A4D1S0 409 aaPredicted RBP8.68□□□□□ -1.02
CCDC178-209ENST00000579947 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
CCDC178-209ENST00000579947 RRS1Q15050 365 aaKnown RBP8.68□□□□□ -1.02
CCDC178-209ENST00000579947 DPF3Q92784 378 aa8.68□□□□□ -1.02
CCDC178-209ENST00000579947 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 HSP90AB2PQ58FF8 381 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 TERF2IPQ9NYB0 399 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 A0A087WZG4 1122 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 GMPSP49915 693 aaPredicted RBP8.67□□□□□ -1.02
CCDC178-209ENST00000579947 CABP4P57796 275 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 TNFRSF10AO00220 468 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 NR2E3Q9Y5X4 410 aa8.67□□□□□ -1.02
CCDC178-209ENST00000579947 ZNF646O15015 1829 aaPredicted RBP8.66□□□□□ -1.02
CCDC178-209ENST00000579947 NIM1KQ8IY84 436 aa8.66□□□□□ -1.02
CCDC178-209ENST00000579947 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
CCDC178-209ENST00000579947 MAP3K12Q12852 859 aa8.66□□□□□ -1.02
CCDC178-209ENST00000579947 DLK2Q6UY11 383 aa8.66□□□□□ -1.02
CCDC178-209ENST00000579947 LAMB1P07942 1786 aa8.65□□□□□ -1.02
CCDC178-209ENST00000579947 FKBP1BP68106 108 aa8.65□□□□□ -1.02
CCDC178-209ENST00000579947 ERO1AQ96HE7 468 aa8.65□□□□□ -1.02
CCDC178-209ENST00000579947 HTATIP2Q9BUP3 242 aa8.65□□□□□ -1.02
CCDC178-209ENST00000579947 R3HDMLQ9H3Y0 253 aa8.65□□□□□ -1.02
CCDC178-209ENST00000579947 ZBTB1Q9Y2K1 713 aa8.65□□□□□ -1.02
CCDC178-209ENST00000579947 KRT26Q7Z3Y9 468 aa8.65□□□□□ -1.03
CCDC178-209ENST00000579947 VPS33BQ9H267 617 aa8.65□□□□□ -1.03
CCDC178-209ENST00000579947 BMP8BP34820 402 aa8.64□□□□□ -1.03
CCDC178-209ENST00000579947 SREBF2Q12772 1141 aa8.64□□□□□ -1.03
CCDC178-209ENST00000579947 LRIT3Q3SXY7 679 aa8.64□□□□□ -1.03
CCDC178-209ENST00000579947 ALDH1B1P30837 517 aa8.64□□□□□ -1.03
CCDC178-209ENST00000579947 TMEM265A0A087WTH1 108 aa8.64□□□□□ -1.03
CCDC178-209ENST00000579947 PPEF1O14829 653 aaPredicted RBP8.64□□□□□ -1.03
CCDC178-209ENST00000579947 SLC4A8Q2Y0W8 1093 aa8.64□□□□□ -1.03
CCDC178-209ENST00000579947 ADM5C9JUS6 153 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 CXCL9Q07325 125 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 SLC12A5Q9H2X9 1139 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
CCDC178-209ENST00000579947 UBE2Q1Q7Z7E8 422 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 NBPF11Q86T75 865 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 SETDB2Q96T68 719 aa8.63□□□□□ -1.03
CCDC178-209ENST00000579947 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
CCDC178-209ENST00000579947 A0A0C4DFX4 3053 aa8.62□□□□□ -1.03
CCDC178-209ENST00000579947 FAM109BQ6ICB4 259 aaPredicted RBP8.62□□□□□ -1.03
CCDC178-209ENST00000579947 GUCD1Q96NT3 240 aa8.62□□□□□ -1.03
CCDC178-209ENST00000579947 ZNRF3Q9ULT6 936 aa8.62□□□□□ -1.03
CCDC178-209ENST00000579947 POLR2AP24928 1970 aaKnown RBP8.61□□□□□ -1.03
CCDC178-209ENST00000579947 NPHP1O15259 732 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 SHISA4Q96DD7 197 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 BCL2L13Q9BXK5 485 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 SPTBN5Q9NRC6 3674 aaKnown RBP8.61□□□□□ -1.03
CCDC178-209ENST00000579947 KIF20BQ96Q89 1820 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 H7C1D1 291 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 DCPSQ96C86 337 aaKnown RBP8.61□□□□□ -1.03
CCDC178-209ENST00000579947 CDCA5Q96FF9 252 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 CNOT7Q9UIV1 285 aaKnown RBP8.61□□□□□ -1.03
CCDC178-209ENST00000579947 KIAA0100Q14667 2235 aaKnown RBP8.61□□□□□ -1.03
CCDC178-209ENST00000579947 UBR2Q8IWV8 1755 aa8.61□□□□□ -1.03
CCDC178-209ENST00000579947 TNIP1Q15025 636 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 SAMD7Q7Z3H4 446 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 ZBTB12Q9Y330 459 aaPredicted RBP8.6□□□□□ -1.03
CCDC178-209ENST00000579947 MKI67P46013 3256 aaKnown RBP8.6□□□□□ -1.03
CCDC178-209ENST00000579947 EYA1Q99502 592 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 STAP2Q9UGK3 403 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 SSC5DA1L4H1 1573 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 CD99L2Q8TCZ2 262 aa8.6□□□□□ -1.03
CCDC178-209ENST00000579947 PUS7Q96PZ0 661 aaKnown RBP8.6□□□□□ -1.03
CCDC178-209ENST00000579947 PPIP5K2O43314 1243 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 SLC9C1Q4G0N8 1177 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 NFATC2IPQ8NCF5 419 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 MICALL2Q8IY33 904 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 GDF15Q99988 308 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 CEP290O15078 2479 aa8.59□□□□□ -1.03
CCDC178-209ENST00000579947 SHTN1A0MZ66 631 aa8.58□□□□□ -1.04
CCDC178-209ENST00000579947 RIC1Q4ADV7 1423 aa8.58□□□□□ -1.04
CCDC178-209ENST00000579947 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
CCDC178-209ENST00000579947 DPF2Q92785 391 aa8.58□□□□□ -1.04
CCDC178-209ENST00000579947 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
CCDC178-209ENST00000579947 BCAMP50895 628 aa8.57□□□□□ -1.04
CCDC178-209ENST00000579947 AOC3Q16853 763 aa8.57□□□□□ -1.04
CCDC178-209ENST00000579947 TJAP1Q5JTD0 557 aa8.57□□□□□ -1.04
CCDC178-209ENST00000579947 SULF1Q8IWU6 871 aa8.57□□□□□ -1.04
CCDC178-209ENST00000579947 NKX2-3Q8TAU0 364 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms