RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 SLC10A5Q5PT55 438 aa33.8■■■■□ 3
LIMD2-208ENST00000579814 NLRP3Q96P20 1036 aa33.8■■■■□ 3
LIMD2-208ENST00000579814 DLEC1Q9Y238 1755 aa33.8■■■■□ 3
LIMD2-208ENST00000579814 NUP98P52948 1817 aa33.79■■■■□ 3
LIMD2-208ENST00000579814 RIC3Q7Z5B4 369 aa33.79■■■■□ 3
LIMD2-208ENST00000579814 TRMT112Q9UI30 125 aaKnown RBP33.79■■■■□ 3
LIMD2-208ENST00000579814 TWISTNBQ3B726 338 aaPredicted RBP33.78■■■■□ 3
LIMD2-208ENST00000579814 C7orf43Q8WVR3 580 aa33.78■■■■□ 3
LIMD2-208ENST00000579814 PHAXQ9H814 394 aaKnown RBP33.78■■■■□ 3
LIMD2-208ENST00000579814 C1QTNF8P60827 252 aa33.77■■■■□ 3
LIMD2-208ENST00000579814 TAOK3Q9H2K8 898 aa33.77■■■■□ 3
LIMD2-208ENST00000579814 RIC1Q4ADV7 1423 aa33.77■■■■□ 3
LIMD2-208ENST00000579814 HOXA10P31260 410 aaPredicted RBP33.76■■■□□ 2.99
LIMD2-208ENST00000579814 CCDC93Q567U6 631 aa33.76■■■□□ 2.99
LIMD2-208ENST00000579814 RBM17Q96I25 401 aaKnown RBP33.76■■■□□ 2.99
LIMD2-208ENST00000579814 ISCA1Q9BUE6 129 aa33.76■■■□□ 2.99
LIMD2-208ENST00000579814 STK31Q9BXU1 1019 aa33.76■■■□□ 2.99
LIMD2-208ENST00000579814 SH3TC1Q8TE82 1336 aa33.75■■■□□ 2.99
LIMD2-208ENST00000579814 FANCIQ9NVI1 1328 aa33.75■■■□□ 2.99
LIMD2-208ENST00000579814 COL11A2P13942 1736 aaPredicted RBP33.74■■■□□ 2.99
LIMD2-208ENST00000579814 ATP5J2-PTCD1G3V325 749 aa33.74■■■□□ 2.99
LIMD2-208ENST00000579814 DDX58O95786 925 aaKnown RBP33.74■■■□□ 2.99
LIMD2-208ENST00000579814 PRELPP51888 382 aa33.74■■■□□ 2.99
LIMD2-208ENST00000579814 LTBP3Q9NS15 1303 aa33.74■■■□□ 2.99
LIMD2-208ENST00000579814 ZC3H4Q9UPT8 1303 aaKnown RBP33.74■■■□□ 2.99
LIMD2-208ENST00000579814 TRIM28Q13263 835 aaKnown RBP33.72■■■□□ 2.99
LIMD2-208ENST00000579814 CRAMP1Q96RY5 1269 aa33.72■■■□□ 2.99
LIMD2-208ENST00000579814 C3orf67Q6ZVT6 689 aa33.71■■■□□ 2.99
LIMD2-208ENST00000579814 RTKN2Q8IZC4 609 aa33.71■■■□□ 2.99
LIMD2-208ENST00000579814 MYH16Q9H6N6 1097 aa33.71■■■□□ 2.99
LIMD2-208ENST00000579814 KDM2BQ8NHM5 1336 aa33.71■■■□□ 2.99
LIMD2-208ENST00000579814 HCLS1P14317 486 aaPredicted RBP33.7■■■□□ 2.99
LIMD2-208ENST00000579814 SYNE4Q8N205 404 aa33.7■■■□□ 2.99
LIMD2-208ENST00000579814 TCERG1O14776 1098 aaKnown RBP33.69■■■□□ 2.98
LIMD2-208ENST00000579814 CC2D2BQ6DHV5 1058 aa33.69■■■□□ 2.98
LIMD2-208ENST00000579814 ZNF428Q96B54 188 aa33.69■■■□□ 2.98
LIMD2-208ENST00000579814 SLX4Q8IY92 1834 aa33.67■■■□□ 2.98
LIMD2-208ENST00000579814 CCER2I3L3R5 266 aa33.67■■■□□ 2.98
LIMD2-208ENST00000579814 KIF3CO14782 793 aa33.67■■■□□ 2.98
LIMD2-208ENST00000579814 SLC4A2P04920 1241 aa33.66■■■□□ 2.98
LIMD2-208ENST00000579814 FKBP4Q02790 459 aaKnown RBP eCLIP33.66■■■□□ 2.98
LIMD2-208ENST00000579814 EXOSC9Q06265 439 aaKnown RBP33.66■■■□□ 2.98
LIMD2-208ENST00000579814 OLFM4Q6UX06 510 aa33.66■■■□□ 2.98
LIMD2-208ENST00000579814 FAM89AQ96GI7 184 aa33.66■■■□□ 2.98
LIMD2-208ENST00000579814 MYD88Q99836 296 aa33.66■■■□□ 2.98
LIMD2-208ENST00000579814 SPINK5Q9NQ38 1064 aaPredicted RBP33.66■■■□□ 2.98
LIMD2-208ENST00000579814 METTL22Q9BUU2 404 aaPredicted RBP33.65■■■□□ 2.98
LIMD2-208ENST00000579814 TMX4Q9H1E5 349 aaPredicted RBP33.65■■■□□ 2.98
LIMD2-208ENST00000579814 NMRK2Q9NPI5 230 aa33.65■■■□□ 2.98
LIMD2-208ENST00000579814 VAMP4O75379 141 aa33.64■■■□□ 2.98
LIMD2-208ENST00000579814 GRIPAP1Q4V328 841 aa33.64■■■□□ 2.98
LIMD2-208ENST00000579814 KSR2Q6VAB6 950 aa33.64■■■□□ 2.98
LIMD2-208ENST00000579814 GLTPD2A6NH11 291 aa33.63■■■□□ 2.97
LIMD2-208ENST00000579814 PPEF1O14829 653 aaPredicted RBP33.63■■■□□ 2.97
LIMD2-208ENST00000579814 DPY19L2Q6NUT2 758 aa33.63■■■□□ 2.97
LIMD2-208ENST00000579814 MAP3K2Q9Y2U5 619 aa33.63■■■□□ 2.97
LIMD2-208ENST00000579814 TNRC6CQ9HCJ0 1690 aaKnown RBP33.62■■■□□ 2.97
LIMD2-208ENST00000579814 PI4KAP2A4QPH2 592 aa33.62■■■□□ 2.97
LIMD2-208ENST00000579814 DDX46Q7L014 1031 aaKnown RBP33.62■■■□□ 2.97
LIMD2-208ENST00000579814 PI4KAP1Q8N8J0 262 aa33.62■■■□□ 2.97
LIMD2-208ENST00000579814 CCDC191Q8NCU4 936 aa33.62■■■□□ 2.97
LIMD2-208ENST00000579814 RTL5Q5HYW3 569 aaPredicted RBP33.61■■■□□ 2.97
LIMD2-208ENST00000579814 BBOX1O75936 387 aa33.6■■■□□ 2.97
LIMD2-208ENST00000579814 ZBTB38Q8NAP3 1195 aaPredicted RBP33.6■■■□□ 2.97
LIMD2-208ENST00000579814 RRAGCQ9HB90 399 aa33.6■■■□□ 2.97
LIMD2-208ENST00000579814 IRS4O14654 1257 aaPredicted RBP33.59■■■□□ 2.97
LIMD2-208ENST00000579814 HSP90B1P14625 803 aaKnown RBP33.59■■■□□ 2.97
LIMD2-208ENST00000579814 G2E3Q7L622 706 aa33.59■■■□□ 2.97
LIMD2-208ENST00000579814 ZNF277Q9NRM2 450 aaPredicted RBP33.59■■■□□ 2.97
LIMD2-208ENST00000579814 CWC25Q9NXE8 425 aaPredicted RBP33.59■■■□□ 2.97
LIMD2-208ENST00000579814 ABCC4O15439 1325 aa33.58■■■□□ 2.97
LIMD2-208ENST00000579814 ZNF521Q96K83 1311 aa33.58■■■□□ 2.97
LIMD2-208ENST00000579814 NEXNQ0ZGT2 675 aa33.58■■■□□ 2.97
LIMD2-208ENST00000579814 C16orf71Q8IYS4 520 aaPredicted RBP33.58■■■□□ 2.97
LIMD2-208ENST00000579814 PSMD1Q99460 953 aa33.58■■■□□ 2.97
LIMD2-208ENST00000579814 SBF1O95248 1867 aa33.57■■■□□ 2.96
LIMD2-208ENST00000579814 TOMM70O94826 608 aa33.57■■■□□ 2.96
LIMD2-208ENST00000579814 ATP6V0A2Q9Y487 856 aa33.57■■■□□ 2.96
LIMD2-208ENST00000579814 FLIIQ13045 1269 aa33.56■■■□□ 2.96
LIMD2-208ENST00000579814 SF3B3Q15393 1217 aaKnown RBP33.56■■■□□ 2.96
LIMD2-208ENST00000579814 PCCAP05165 728 aaPredicted RBP33.55■■■□□ 2.96
LIMD2-208ENST00000579814 ANKRD36CQ5JPF3 1778 aa33.55■■■□□ 2.96
LIMD2-208ENST00000579814 ARFGEF2Q9Y6D5 1785 aa33.55■■■□□ 2.96
LIMD2-208ENST00000579814 FER1L6Q2WGJ9 1857 aa33.54■■■□□ 2.96
LIMD2-208ENST00000579814 IARSP41252 1262 aaKnown RBP33.54■■■□□ 2.96
LIMD2-208ENST00000579814 GRAPQ13588 217 aa33.54■■■□□ 2.96
LIMD2-208ENST00000579814 GRAPLQ8TC17 118 aaPredicted RBP33.54■■■□□ 2.96
LIMD2-208ENST00000579814 FKBP5Q13451 457 aaPredicted RBP33.53■■■□□ 2.96
LIMD2-208ENST00000579814 SP8Q8IXZ3 490 aa33.53■■■□□ 2.96
LIMD2-208ENST00000579814 VEGFAP15692 232 aaPredicted RBP33.52■■■□□ 2.96
LIMD2-208ENST00000579814 TMC4Q7Z404 712 aa33.51■■■□□ 2.95
LIMD2-208ENST00000579814 E9PSI1 815 aa33.5■■■□□ 2.95
LIMD2-208ENST00000579814 IGKV5-2P06315 115 aa33.5■■■□□ 2.95
LIMD2-208ENST00000579814 JDP2Q8WYK2 163 aa33.49■■■□□ 2.95
LIMD2-208ENST00000579814 CACNA1SQ13698 1873 aa33.48■■■□□ 2.95
LIMD2-208ENST00000579814 SNED1Q8TER0 1413 aa33.48■■■□□ 2.95
LIMD2-208ENST00000579814 DIEXFQ68CQ4 756 aaKnown RBP33.48■■■□□ 2.95
LIMD2-208ENST00000579814 JARID2Q92833 1246 aaPredicted RBP33.48■■■□□ 2.95
LIMD2-208ENST00000579814 PDE8AO60658 829 aa33.47■■■□□ 2.95
LIMD2-208ENST00000579814 RBM46Q8TBY0 533 aaKnown RBP33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms