RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 UTP14AQ9BVJ6 771 aaKnown RBP30.86■■■□□ 2.53
CDKN2A-214ENST00000579755 ABCC12Q96J65 1359 aa30.86■■■□□ 2.53
CDKN2A-214ENST00000579755 CRY2Q49AN0 593 aa30.85■■■□□ 2.53
CDKN2A-214ENST00000579755 RBM17Q96I25 401 aaKnown RBP30.85■■■□□ 2.53
CDKN2A-214ENST00000579755 NTSR2O95665 410 aa30.84■■■□□ 2.53
CDKN2A-214ENST00000579755 FKBP4Q02790 459 aaKnown RBP eCLIP30.84■■■□□ 2.53
CDKN2A-214ENST00000579755 NLRP3Q96P20 1036 aa30.84■■■□□ 2.53
CDKN2A-214ENST00000579755 CHPF2Q9P2E5 772 aa30.84■■■□□ 2.53
CDKN2A-214ENST00000579755 GNAI1P63096 354 aa30.83■■■□□ 2.53
CDKN2A-214ENST00000579755 DUSP27Q5VZP5 1158 aa30.83■■■□□ 2.53
CDKN2A-214ENST00000579755 MBIPQ9NS73 344 aa30.83■■■□□ 2.53
CDKN2A-214ENST00000579755 DBF4Q9UBU7 674 aaPredicted RBP30.83■■■□□ 2.53
CDKN2A-214ENST00000579755 DICER1Q9UPY3 1922 aaKnown RBP30.83■■■□□ 2.53
CDKN2A-214ENST00000579755 SMC1BQ8NDV3 1235 aa30.82■■■□□ 2.52
CDKN2A-214ENST00000579755 OLFM4Q6UX06 510 aa30.81■■■□□ 2.52
CDKN2A-214ENST00000579755 IFT57Q9NWB7 429 aa30.81■■■□□ 2.52
CDKN2A-214ENST00000579755 TCIRG1Q13488 830 aa30.8■■■□□ 2.52
CDKN2A-214ENST00000579755 TMX4Q9H1E5 349 aaPredicted RBP30.8■■■□□ 2.52
CDKN2A-214ENST00000579755 ZNF277Q9NRM2 450 aaPredicted RBP30.8■■■□□ 2.52
CDKN2A-214ENST00000579755 HOXA10P31260 410 aaPredicted RBP30.79■■■□□ 2.52
CDKN2A-214ENST00000579755 CC2D2BQ6DHV5 1058 aa30.79■■■□□ 2.52
CDKN2A-214ENST00000579755 RIC1Q4ADV7 1423 aa30.79■■■□□ 2.52
CDKN2A-214ENST00000579755 MIER1Q8N108 512 aa30.78■■■□□ 2.52
CDKN2A-214ENST00000579755 SYNE4Q8N205 404 aa30.78■■■□□ 2.52
CDKN2A-214ENST00000579755 CRAMP1Q96RY5 1269 aa30.78■■■□□ 2.52
CDKN2A-214ENST00000579755 HYPKQ9NX55 129 aa30.78■■■□□ 2.52
CDKN2A-214ENST00000579755 TRMT112Q9UI30 125 aaKnown RBP30.78■■■□□ 2.52
CDKN2A-214ENST00000579755 RNF123Q5XPI4 1314 aa30.77■■■□□ 2.52
CDKN2A-214ENST00000579755 CCER2I3L3R5 266 aa30.77■■■□□ 2.52
CDKN2A-214ENST00000579755 SLC10A5Q5PT55 438 aa30.77■■■□□ 2.52
CDKN2A-214ENST00000579755 ANKRD13DQ6ZTN6 518 aa30.77■■■□□ 2.52
CDKN2A-214ENST00000579755 NLRP10Q86W26 655 aa30.77■■■□□ 2.52
CDKN2A-214ENST00000579755 DDNO94850 711 aaPredicted RBP30.76■■■□□ 2.51
CDKN2A-214ENST00000579755 ZNF853P0CG23 659 aa30.76■■■□□ 2.51
CDKN2A-214ENST00000579755 GRIPAP1Q4V328 841 aa30.76■■■□□ 2.51
CDKN2A-214ENST00000579755 PLBD2Q8NHP8 589 aa30.76■■■□□ 2.51
CDKN2A-214ENST00000579755 ELL2O00472 640 aaPredicted RBP30.75■■■□□ 2.51
CDKN2A-214ENST00000579755 TCERG1O14776 1098 aaKnown RBP30.75■■■□□ 2.51
CDKN2A-214ENST00000579755 CCDC184Q52MB2 194 aa30.75■■■□□ 2.51
CDKN2A-214ENST00000579755 PPEF1O14829 653 aaPredicted RBP30.74■■■□□ 2.51
CDKN2A-214ENST00000579755 IARSP41252 1262 aaKnown RBP30.74■■■□□ 2.51
CDKN2A-214ENST00000579755 JDP2Q8WYK2 163 aa30.73■■■□□ 2.51
CDKN2A-214ENST00000579755 CHMP4AQ9BY43 222 aa30.73■■■□□ 2.51
CDKN2A-214ENST00000579755 C3orf67Q6ZVT6 689 aa30.72■■■□□ 2.51
CDKN2A-214ENST00000579755 PSMD1Q99460 953 aa30.72■■■□□ 2.51
CDKN2A-214ENST00000579755 WDR90Q96KV7 1748 aa30.72■■■□□ 2.51
CDKN2A-214ENST00000579755 SH3TC1Q8TE82 1336 aa30.72■■■□□ 2.51
CDKN2A-214ENST00000579755 ANKRD36CQ5JPF3 1778 aa30.71■■■□□ 2.51
CDKN2A-214ENST00000579755 POTECB2RU33 542 aa30.71■■■□□ 2.51
CDKN2A-214ENST00000579755 HCLS1P14317 486 aaPredicted RBP30.71■■■□□ 2.51
CDKN2A-214ENST00000579755 MRS2Q9HD23 443 aa30.71■■■□□ 2.51
CDKN2A-214ENST00000579755 IQCA1LA6NCM1 817 aa30.7■■■□□ 2.51
CDKN2A-214ENST00000579755 RIC3Q7Z5B4 369 aa30.69■■■□□ 2.5
CDKN2A-214ENST00000579755 GOLGA2Q08379 1002 aa30.68■■■□□ 2.5
CDKN2A-214ENST00000579755 DDX46Q7L014 1031 aaKnown RBP30.68■■■□□ 2.5
CDKN2A-214ENST00000579755 ZNF428Q96B54 188 aa30.68■■■□□ 2.5
CDKN2A-214ENST00000579755 ATP5J2-PTCD1G3V325 749 aa30.67■■■□□ 2.5
CDKN2A-214ENST00000579755 BBOX1O75936 387 aa30.66■■■□□ 2.5
CDKN2A-214ENST00000579755 C8orf58Q8NAV2 365 aa30.66■■■□□ 2.5
CDKN2A-214ENST00000579755 EIF6P56537 245 aaKnown RBP30.65■■■□□ 2.5
CDKN2A-214ENST00000579755 LARGE2Q8N3Y3 721 aa30.65■■■□□ 2.5
CDKN2A-214ENST00000579755 ATP6V0A2Q9Y487 856 aa30.65■■■□□ 2.5
CDKN2A-214ENST00000579755 CCDC30Q5VVM6 783 aa30.64■■■□□ 2.5
CDKN2A-214ENST00000579755 ISCA1Q9BUE6 129 aa30.64■■■□□ 2.5
CDKN2A-214ENST00000579755 ABCC4O15439 1325 aa30.64■■■□□ 2.5
CDKN2A-214ENST00000579755 ZNF541Q9H0D2 1346 aa30.64■■■□□ 2.5
CDKN2A-214ENST00000579755 FZD9O00144 591 aa30.63■■■□□ 2.49
CDKN2A-214ENST00000579755 HTRA3P83110 453 aa30.63■■■□□ 2.49
CDKN2A-214ENST00000579755 CCDC27Q2M243 656 aa30.63■■■□□ 2.49
CDKN2A-214ENST00000579755 L3MBTL3Q96JM7 780 aaPredicted RBP30.63■■■□□ 2.49
CDKN2A-214ENST00000579755 PHAXQ9H814 394 aaKnown RBP30.63■■■□□ 2.49
CDKN2A-214ENST00000579755 CHADLQ6NUI6 762 aa30.62■■■□□ 2.49
CDKN2A-214ENST00000579755 DNAJC5GQ8N7S2 189 aa30.62■■■□□ 2.49
CDKN2A-214ENST00000579755 FAM89AQ96GI7 184 aa30.62■■■□□ 2.49
CDKN2A-214ENST00000579755 DDX58O95786 925 aaKnown RBP30.61■■■□□ 2.49
CDKN2A-214ENST00000579755 WWC1Q8IX03 1113 aa30.61■■■□□ 2.49
CDKN2A-214ENST00000579755 SUPT20HQ8NEM7 779 aa30.61■■■□□ 2.49
CDKN2A-214ENST00000579755 RTL5Q5HYW3 569 aaPredicted RBP30.6■■■□□ 2.49
CDKN2A-214ENST00000579755 SP8Q8IXZ3 490 aa30.6■■■□□ 2.49
CDKN2A-214ENST00000579755 HACL1Q9UJ83 578 aa30.6■■■□□ 2.49
CDKN2A-214ENST00000579755 PPIP5K2O43314 1243 aa30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 TRIM28Q13263 835 aaKnown RBP30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 GRAPQ13588 217 aa30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 NIM1KQ8IY84 436 aa30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 GPC2Q8N158 579 aa30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 GRAPLQ8TC17 118 aaPredicted RBP30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 TSR2Q969E8 191 aaKnown RBP30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 TAF1DQ9H5J8 278 aaPredicted RBP30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 GJA3Q9Y6H8 435 aa30.59■■■□□ 2.49
CDKN2A-214ENST00000579755 SNED1Q8TER0 1413 aa30.58■■■□□ 2.49
CDKN2A-214ENST00000579755 EAPPQ56P03 285 aaPredicted RBP30.58■■■□□ 2.49
CDKN2A-214ENST00000579755 DPP8Q6V1X1 898 aaPredicted RBP30.58■■■□□ 2.49
CDKN2A-214ENST00000579755 MPNDQ8N594 471 aa30.58■■■□□ 2.49
CDKN2A-214ENST00000579755 SCN4AP35499 1836 aa30.57■■■□□ 2.48
CDKN2A-214ENST00000579755 CEP350Q5VT06 3117 aa30.57■■■□□ 2.48
CDKN2A-214ENST00000579755 HSP90B1P14625 803 aaKnown RBP30.57■■■□□ 2.48
CDKN2A-214ENST00000579755 MYD88Q99836 296 aa30.57■■■□□ 2.48
CDKN2A-214ENST00000579755 STK31Q9BXU1 1019 aa30.57■■■□□ 2.48
CDKN2A-214ENST00000579755 VPS33BQ9H267 617 aa30.57■■■□□ 2.48
CDKN2A-214ENST00000579755 CLEC11AQ9Y240 323 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms