RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ELOA3BQ3SY89 546 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 SPTY2D1Q68D10 685 aaPredicted RBP8.76□□□□□ -1.01
COPS3-216ENST00000579716 C8orf86Q6ZUL3 223 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 SYT9Q86SS6 491 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 ELOA3Q8NG57 546 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 CLUAP1Q96AJ1 413 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 SLC30A3Q99726 388 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 IGSF5Q9NSI5 407 aa8.76□□□□□ -1.01
COPS3-216ENST00000579716 LAS1LQ9Y4W2 734 aaKnown RBP8.76□□□□□ -1.01
COPS3-216ENST00000579716 ANKRD62A6NC57 917 aa8.75□□□□□ -1.01
COPS3-216ENST00000579716 TPD52L2O43399 206 aaKnown RBP8.75□□□□□ -1.01
COPS3-216ENST00000579716 SFSWAPQ12872 951 aaKnown RBP8.75□□□□□ -1.01
COPS3-216ENST00000579716 NBPF1Q3BBV0 1214 aa8.75□□□□□ -1.01
COPS3-216ENST00000579716 SH3PXD2AQ5TCZ1 1133 aa8.75□□□□□ -1.01
COPS3-216ENST00000579716 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.75□□□□□ -1.01
COPS3-216ENST00000579716 IPO4Q8TEX9 1081 aaKnown RBP8.75□□□□□ -1.01
COPS3-216ENST00000579716 DRC1Q96MC2 740 aa8.75□□□□□ -1.01
COPS3-216ENST00000579716 TPSG1Q9NRR2 321 aa8.75□□□□□ -1.01
COPS3-216ENST00000579716 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 BRD1O95696 1058 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 ABL2P42684 1182 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 FAM50AQ14320 339 aaKnown RBP8.74□□□□□ -1.01
COPS3-216ENST00000579716 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 ZNF358Q9NW07 568 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 PRR12Q9ULL5 1215 aa8.74□□□□□ -1.01
COPS3-216ENST00000579716 NAP1L2Q9ULW6 460 aaPredicted RBP8.74□□□□□ -1.01
COPS3-216ENST00000579716 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
COPS3-216ENST00000579716 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
COPS3-216ENST00000579716 TEAD4Q15561 434 aa8.73□□□□□ -1.01
COPS3-216ENST00000579716 TBCELQ5QJ74 424 aa8.73□□□□□ -1.01
COPS3-216ENST00000579716 LRRC69Q6ZNQ3 347 aa8.73□□□□□ -1.01
COPS3-216ENST00000579716 TMTC2Q8N394 836 aa8.73□□□□□ -1.01
COPS3-216ENST00000579716 ZNF777Q9ULD5 760 aaPredicted RBP8.73□□□□□ -1.01
COPS3-216ENST00000579716 SIN3BO75182 1162 aa8.72□□□□□ -1.01
COPS3-216ENST00000579716 NOS2P35228 1153 aa8.72□□□□□ -1.01
COPS3-216ENST00000579716 KCNA1Q09470 495 aa8.72□□□□□ -1.01
COPS3-216ENST00000579716 ZMYM1Q5SVZ6 1142 aa8.72□□□□□ -1.01
COPS3-216ENST00000579716 ALG2Q9H553 416 aa8.72□□□□□ -1.01
COPS3-216ENST00000579716 PPME1Q9Y570 386 aa8.72□□□□□ -1.01
COPS3-216ENST00000579716 OS9Q13438 667 aaPredicted RBP8.71□□□□□ -1.02
COPS3-216ENST00000579716 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
COPS3-216ENST00000579716 MICALL1Q8N3F8 863 aa8.71□□□□□ -1.02
COPS3-216ENST00000579716 YTHDC1Q96MU7 727 aaKnown RBP8.71□□□□□ -1.02
COPS3-216ENST00000579716 ZBTB7BO15156 539 aaPredicted RBP8.7□□□□□ -1.02
COPS3-216ENST00000579716 ALBP02768 609 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 NID1P14543 1247 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 ERCC3P19447 782 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 WASHC4Q2M389 1173 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 BICDL1Q6ZP65 573 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 TNS4Q8IZW8 715 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 TNFRSF25Q93038 417 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 PRDM6Q9NQX0 595 aa8.7□□□□□ -1.02
COPS3-216ENST00000579716 M0R082 166 aa8.69□□□□□ -1.02
COPS3-216ENST00000579716 ZNF417Q8TAU3 575 aa8.69□□□□□ -1.02
COPS3-216ENST00000579716 ZNF587Q96SQ5 575 aaPredicted RBP8.69□□□□□ -1.02
COPS3-216ENST00000579716 HIRIP3Q9BW71 556 aaPredicted RBP8.69□□□□□ -1.02
COPS3-216ENST00000579716 UNCXA6NJT0 531 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 DYRK3O43781 588 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 GTF2IP78347 998 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 GRIK4Q16099 956 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 FAM43BQ6ZT52 329 aaPredicted RBP8.68□□□□□ -1.02
COPS3-216ENST00000579716 ILDR2Q71H61 639 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 SLC9A9Q8IVB4 645 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 SECISBP2LQ93073 1101 aaKnown RBP8.68□□□□□ -1.02
COPS3-216ENST00000579716 PRM3Q9NNZ6 103 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 TERF2IPQ9NYB0 399 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 GJA3Q9Y6H8 435 aa8.68□□□□□ -1.02
COPS3-216ENST00000579716 ACIN1Q9UKV3 1341 aaKnown RBP8.68□□□□□ -1.02
COPS3-216ENST00000579716 KIAA1024Q9UPX6 916 aa8.67□□□□□ -1.02
COPS3-216ENST00000579716 BACH1O14867 736 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 SKIP12755 728 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 ALAS2P22557 587 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 SOX11P35716 441 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 NCOA4Q13772 614 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 MCM6Q14566 821 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 RALBP1Q15311 655 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 RAB44Q7Z6P3 723 aaPredicted RBP8.66□□□□□ -1.02
COPS3-216ENST00000579716 FTSJ3Q8IY81 847 aaKnown RBP8.66□□□□□ -1.02
COPS3-216ENST00000579716 SREK1Q8WXA9 508 aaKnown RBP8.66□□□□□ -1.02
COPS3-216ENST00000579716 KRTAP4-12Q9BQ66 201 aa8.66□□□□□ -1.02
COPS3-216ENST00000579716 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
COPS3-216ENST00000579716 KRTAP1-3Q8IUG1 177 aa8.65□□□□□ -1.02
COPS3-216ENST00000579716 DEPDC4Q8N2C3 294 aa8.65□□□□□ -1.02
COPS3-216ENST00000579716 ZNF280CQ8ND82 737 aa8.65□□□□□ -1.02
COPS3-216ENST00000579716 UBA5Q9GZZ9 404 aa8.65□□□□□ -1.02
COPS3-216ENST00000579716 NOD1Q9Y239 953 aa8.65□□□□□ -1.02
COPS3-216ENST00000579716 COG6Q9Y2V7 657 aa8.65□□□□□ -1.02
COPS3-216ENST00000579716 SELPP16109 830 aa8.64□□□□□ -1.03
COPS3-216ENST00000579716 SPEM2Q0P670 501 aa8.64□□□□□ -1.03
COPS3-216ENST00000579716 EML3Q32P44 896 aa8.64□□□□□ -1.03
COPS3-216ENST00000579716 SUGT1Q9Y2Z0 365 aa8.64□□□□□ -1.03
COPS3-216ENST00000579716 KCNQ4P56696 695 aa8.63□□□□□ -1.03
COPS3-216ENST00000579716 PRSS36Q5K4E3 855 aa8.63□□□□□ -1.03
COPS3-216ENST00000579716 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
COPS3-216ENST00000579716 NFATC2IPQ8NCF5 419 aa8.63□□□□□ -1.03
COPS3-216ENST00000579716 ADAMTS19Q8TE59 1207 aa8.63□□□□□ -1.03
COPS3-216ENST00000579716 MORC4Q8TE76 937 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms