RNA–Protein interactions for RNA: ENST00000579650.5

PROCA1-208, Transcript of protein interacting with cyclin A1, human

TSL 1 (best)

Gene PROCA1, Length 1,007 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PROCA1-208	ENST00000579650	BCS1L	Q9Y276	419 aa		29.16	■■■□□ 2.26
PROCA1-208	ENST00000579650	COL11A2	P13942	1736 aa	Predicted RBP	29.15	■■■□□ 2.26
PROCA1-208	ENST00000579650	RIC1	Q4ADV7	1423 aa		29.15	■■■□□ 2.26
PROCA1-208	ENST00000579650	ATP5J2-PTCD1	G3V325	749 aa		29.15	■■■□□ 2.26
PROCA1-208	ENST00000579650	METTL22	Q9BUU2	404 aa	Predicted RBP	29.15	■■■□□ 2.26
PROCA1-208	ENST00000579650	CACNA1F	O60840	1977 aa		29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	UTRN	P46939	3433 aa		29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	PI4KAP2	A4QPH2	592 aa		29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	SRGN	P10124	158 aa		29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	DALRD3	Q5D0E6	543 aa	Known RBP	29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	PI4KAP1	Q8N8J0	262 aa		29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	MAP3K2	Q9Y2U5	619 aa		29.14	■■■□□ 2.26
PROCA1-208	ENST00000579650	RNF123	Q5XPI4	1314 aa		29.14	■■■□□ 2.25
PROCA1-208	ENST00000579650	TNRC6C	Q9HCJ0	1690 aa	Known RBP	29.12	■■■□□ 2.25
PROCA1-208	ENST00000579650	SLC10A5	Q5PT55	438 aa		29.12	■■■□□ 2.25
PROCA1-208	ENST00000579650	MYD88	Q99836	296 aa		29.12	■■■□□ 2.25
PROCA1-208	ENST00000579650	STYK1	Q6J9G0	422 aa		29.11	■■■□□ 2.25
PROCA1-208	ENST00000579650	TRMT112	Q9UI30	125 aa	Known RBP	29.11	■■■□□ 2.25
PROCA1-208	ENST00000579650	CRY2	Q49AN0	593 aa		29.1	■■■□□ 2.25
PROCA1-208	ENST00000579650	SYNE4	Q8N205	404 aa		29.1	■■■□□ 2.25
PROCA1-208	ENST00000579650	TTLL6	Q8N841	843 aa		29.1	■■■□□ 2.25
PROCA1-208	ENST00000579650	ZNF622	Q969S3	477 aa	Known RBP eCLIP	29.1	■■■□□ 2.25
PROCA1-208	ENST00000579650	ZNF428	Q96B54	188 aa		29.1	■■■□□ 2.25
PROCA1-208	ENST00000579650	MASTL	Q96GX5	879 aa		29.1	■■■□□ 2.25
PROCA1-208	ENST00000579650	FKBP5	Q13451	457 aa	Predicted RBP	29.08	■■■□□ 2.25
PROCA1-208	ENST00000579650	C3orf67	Q6ZVT6	689 aa		29.08	■■■□□ 2.25
PROCA1-208	ENST00000579650	MRPL50	Q8N5N7	158 aa	Known RBP	29.08	■■■□□ 2.25
PROCA1-208	ENST00000579650	ZBED9	Q6R2W3	1325 aa		29.08	■■■□□ 2.25
PROCA1-208	ENST00000579650	SH3TC1	Q8TE82	1336 aa		29.08	■■■□□ 2.25
PROCA1-208	ENST00000579650	ARFGEF1	Q9Y6D6	1849 aa		29.08	■■■□□ 2.25
PROCA1-208	ENST00000579650	IGKV5-2	P06315	115 aa		29.07	■■■□□ 2.24
PROCA1-208	ENST00000579650	CT47B1	P0C2W7	299 aa	Predicted RBP	29.07	■■■□□ 2.24
PROCA1-208	ENST00000579650	NPR1	P16066	1061 aa		29.07	■■■□□ 2.24
PROCA1-208	ENST00000579650	CCDC191	Q8NCU4	936 aa		29.07	■■■□□ 2.24
PROCA1-208	ENST00000579650	SSH1	Q8WYL5	1049 aa		29.07	■■■□□ 2.24
PROCA1-208	ENST00000579650	CNKSR1	Q969H4	720 aa		29.06	■■■□□ 2.24
PROCA1-208	ENST00000579650	DNAAF4	Q8WXU2	420 aa		29.05	■■■□□ 2.24
PROCA1-208	ENST00000579650	FAM89A	Q96GI7	184 aa		29.05	■■■□□ 2.24
PROCA1-208	ENST00000579650	HCLS1	P14317	486 aa	Predicted RBP	29.04	■■■□□ 2.24
PROCA1-208	ENST00000579650	CWC25	Q9NXE8	425 aa	Predicted RBP	29.04	■■■□□ 2.24
PROCA1-208	ENST00000579650	ALDH1L2	Q3SY69	923 aa		29.03	■■■□□ 2.24
PROCA1-208	ENST00000579650	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	29.03	■■■□□ 2.24
PROCA1-208	ENST00000579650	NLRP3	Q96P20	1036 aa		29.03	■■■□□ 2.24
PROCA1-208	ENST00000579650	HOXA10	P31260	410 aa	Predicted RBP	29.02	■■■□□ 2.24
PROCA1-208	ENST00000579650	NEXN	Q0ZGT2	675 aa		29.02	■■■□□ 2.24
PROCA1-208	ENST00000579650	NEURL1B	A8MQ27	555 aa		29.01	■■■□□ 2.23
PROCA1-208	ENST00000579650		F6X3S4	739 aa		29.01	■■■□□ 2.23
PROCA1-208	ENST00000579650	CWF19L2	Q2TBE0	894 aa	Known RBP	29.01	■■■□□ 2.23
PROCA1-208	ENST00000579650	PRPF40B	Q6NWY9	871 aa	Known RBP	29.01	■■■□□ 2.23
PROCA1-208	ENST00000579650	SLX4	Q8IY92	1834 aa		29	■■■□□ 2.23
PROCA1-208	ENST00000579650	PCCA	P05165	728 aa	Predicted RBP	29	■■■□□ 2.23
PROCA1-208	ENST00000579650	ARHGAP27	Q6ZUM4	889 aa		29	■■■□□ 2.23
PROCA1-208	ENST00000579650	BCL2L13	Q9BXK5	485 aa		29	■■■□□ 2.23
PROCA1-208	ENST00000579650	CHD4	Q14839	1912 aa		29	■■■□□ 2.23
PROCA1-208	ENST00000579650	RTL5	Q5HYW3	569 aa	Predicted RBP	28.99	■■■□□ 2.23
PROCA1-208	ENST00000579650	C7orf43	Q8WVR3	580 aa		28.99	■■■□□ 2.23
PROCA1-208	ENST00000579650	DDX60	Q8IY21	1712 aa	Known RBP	28.98	■■■□□ 2.23
PROCA1-208	ENST00000579650	IRS4	O14654	1257 aa	Predicted RBP	28.98	■■■□□ 2.23
PROCA1-208	ENST00000579650	ALDH1B1	P30837	517 aa		28.98	■■■□□ 2.23
PROCA1-208	ENST00000579650	LINS1	Q8NG48	757 aa		28.98	■■■□□ 2.23
PROCA1-208	ENST00000579650	RPGR	Q92834	1020 aa	Known RBP	28.98	■■■□□ 2.23
PROCA1-208	ENST00000579650	C21orf2	O43822	256 aa		28.97	■■■□□ 2.23
PROCA1-208	ENST00000579650	BEND3	Q5T5X7	828 aa		28.97	■■■□□ 2.23
PROCA1-208	ENST00000579650	JARID2	Q92833	1246 aa	Predicted RBP	28.97	■■■□□ 2.23
PROCA1-208	ENST00000579650	CRAMP1	Q96RY5	1269 aa		28.97	■■■□□ 2.23
PROCA1-208	ENST00000579650	LAMB2	P55268	1798 aa		28.96	■■■□□ 2.23
PROCA1-208	ENST00000579650	YY1	P25490	414 aa		28.96	■■■□□ 2.23
PROCA1-208	ENST00000579650	RARS	P54136	660 aa	Known RBP	28.96	■■■□□ 2.23
PROCA1-208	ENST00000579650	RBM17	Q96I25	401 aa	Known RBP	28.96	■■■□□ 2.23
PROCA1-208	ENST00000579650	SMC4	Q9NTJ3	1288 aa		28.96	■■■□□ 2.23
PROCA1-208	ENST00000579650	BRPF1	P55201	1214 aa	Predicted RBP	28.95	■■■□□ 2.22
PROCA1-208	ENST00000579650	GCKR	Q14397	625 aa		28.95	■■■□□ 2.22
PROCA1-208	ENST00000579650	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.95	■■■□□ 2.22
PROCA1-208	ENST00000579650	PTPRC	P08575	1304 aa		28.94	■■■□□ 2.22
PROCA1-208	ENST00000579650	SF3B3	Q15393	1217 aa	Known RBP	28.94	■■■□□ 2.22
PROCA1-208	ENST00000579650	CDHR2	Q9BYE9	1310 aa		28.94	■■■□□ 2.22
PROCA1-208	ENST00000579650		H7C1W4	665 aa		28.93	■■■□□ 2.22
PROCA1-208	ENST00000579650	CACNA1S	Q13698	1873 aa		28.93	■■■□□ 2.22
PROCA1-208	ENST00000579650	ABCC4	O15439	1325 aa		28.92	■■■□□ 2.22
PROCA1-208	ENST00000579650	NFKBIE	O00221	500 aa		28.91	■■■□□ 2.22
PROCA1-208	ENST00000579650	HSP90B1	P14625	803 aa	Known RBP	28.9	■■■□□ 2.22
PROCA1-208	ENST00000579650	CASP7	P55210	303 aa		28.9	■■■□□ 2.22
PROCA1-208	ENST00000579650	RASSF7	Q02833	373 aa		28.9	■■■□□ 2.22
PROCA1-208	ENST00000579650	SOGA3	Q5TF21	947 aa		28.9	■■■□□ 2.22
PROCA1-208	ENST00000579650	OLFM4	Q6UX06	510 aa		28.9	■■■□□ 2.22
PROCA1-208	ENST00000579650	PDE8A	O60658	829 aa		28.89	■■■□□ 2.22
PROCA1-208	ENST00000579650	UBE3B	Q7Z3V4	1068 aa		28.89	■■■□□ 2.22
PROCA1-208	ENST00000579650	PRELP	P51888	382 aa		28.88	■■■□□ 2.21
PROCA1-208	ENST00000579650	SLC4A10	Q6U841	1118 aa		28.88	■■■□□ 2.21
PROCA1-208	ENST00000579650	DDX46	Q7L014	1031 aa	Known RBP	28.88	■■■□□ 2.21
PROCA1-208	ENST00000579650	ALDH1L1	O75891	902 aa		28.87	■■■□□ 2.21
PROCA1-208	ENST00000579650	CCDC93	Q567U6	631 aa		28.87	■■■□□ 2.21
PROCA1-208	ENST00000579650	SLC51A	Q86UW1	340 aa		28.87	■■■□□ 2.21
PROCA1-208	ENST00000579650	NOB1	Q9ULX3	412 aa	Known RBP	28.87	■■■□□ 2.21
PROCA1-208	ENST00000579650	FER1L6	Q2WGJ9	1857 aa		28.87	■■■□□ 2.21
PROCA1-208	ENST00000579650	SNED1	Q8TER0	1413 aa		28.86	■■■□□ 2.21
PROCA1-208	ENST00000579650	PPEF1	O14829	653 aa	Predicted RBP	28.86	■■■□□ 2.21
PROCA1-208	ENST00000579650	GRAP	Q13588	217 aa		28.86	■■■□□ 2.21
PROCA1-208	ENST00000579650	GRAPL	Q8TC17	118 aa	Predicted RBP	28.86	■■■□□ 2.21
PROCA1-208	ENST00000579650	SRCIN1	Q9C0H9	1055 aa		28.86	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms