RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 ARFGEF2Q9Y6D5 1785 aa21.74■■□□□ 1.07
CBX3P2-201ENST00000579647 SYNE4Q8N205 404 aa21.73■■□□□ 1.07
CBX3P2-201ENST00000579647 SSH1Q8WYL5 1049 aa21.73■■□□□ 1.07
CBX3P2-201ENST00000579647 ZNF622Q969S3 477 aaKnown RBP eCLIP21.73■■□□□ 1.07
CBX3P2-201ENST00000579647 ANKRD31Q8N7Z5 1873 aa21.73■■□□□ 1.07
CBX3P2-201ENST00000579647 MRPL50Q8N5N7 158 aaKnown RBP21.72■■□□□ 1.07
CBX3P2-201ENST00000579647 BCL2L13Q9BXK5 485 aa21.72■■□□□ 1.07
CBX3P2-201ENST00000579647 ABCC12Q96J65 1359 aa21.72■■□□□ 1.07
CBX3P2-201ENST00000579647 IBTKQ9P2D0 1353 aaPredicted RBP21.72■■□□□ 1.07
CBX3P2-201ENST00000579647 TRIM28Q13263 835 aaKnown RBP21.72■■□□□ 1.07
CBX3P2-201ENST00000579647 PDZRN3Q9UPQ7 1066 aa21.72■■□□□ 1.07
CBX3P2-201ENST00000579647 CACNA1FO60840 1977 aa21.71■■□□□ 1.07
CBX3P2-201ENST00000579647 RTL5Q5HYW3 569 aaPredicted RBP21.71■■□□□ 1.07
CBX3P2-201ENST00000579647 F6X3S4 739 aa21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 CT47B1P0C2W7 299 aaPredicted RBP21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 SRGNP10124 158 aa21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 NEXNQ0ZGT2 675 aa21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 DALRD3Q5D0E6 543 aaKnown RBP21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 DNAAF4Q8WXU2 420 aa21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 FAM89AQ96GI7 184 aa21.7■■□□□ 1.06
CBX3P2-201ENST00000579647 KLRG2A4D1S0 409 aaPredicted RBP21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 GRIN3BO60391 1043 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 IGKV5-2P06315 115 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 HCLS1P14317 486 aaPredicted RBP21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 ALDH1L2Q3SY69 923 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 SLC10A5Q5PT55 438 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 TTLL6Q8N841 843 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 CCDC191Q8NCU4 936 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 JARID2Q92833 1246 aaPredicted RBP21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 SH3TC1Q8TE82 1336 aa21.69■■□□□ 1.06
CBX3P2-201ENST00000579647 CWF19L2Q2TBE0 894 aaKnown RBP21.68■■□□□ 1.06
CBX3P2-201ENST00000579647 MASTLQ96GX5 879 aa21.68■■□□□ 1.06
CBX3P2-201ENST00000579647 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
CBX3P2-201ENST00000579647 CWC25Q9NXE8 425 aaPredicted RBP21.68■■□□□ 1.06
CBX3P2-201ENST00000579647 RNF123Q5XPI4 1314 aa21.67■■□□□ 1.06
CBX3P2-201ENST00000579647 C3orf67Q6ZVT6 689 aa21.67■■□□□ 1.06
CBX3P2-201ENST00000579647 NLRP3Q96P20 1036 aa21.67■■□□□ 1.06
CBX3P2-201ENST00000579647 STYK1Q6J9G0 422 aa21.66■■□□□ 1.06
CBX3P2-201ENST00000579647 BRCA1P38398 1863 aaKnown RBP21.66■■□□□ 1.06
CBX3P2-201ENST00000579647 NPR1P16066 1061 aa21.65■■□□□ 1.06
CBX3P2-201ENST00000579647 RARSP54136 660 aaKnown RBP21.65■■□□□ 1.06
CBX3P2-201ENST00000579647 ZBTB38Q8NAP3 1195 aaPredicted RBP21.65■■□□□ 1.06
CBX3P2-201ENST00000579647 CNKSR1Q969H4 720 aa21.65■■□□□ 1.06
CBX3P2-201ENST00000579647 COL11A2P13942 1736 aaPredicted RBP21.65■■□□□ 1.06
CBX3P2-201ENST00000579647 TNRC6CQ9HCJ0 1690 aaKnown RBP21.64■■□□□ 1.06
CBX3P2-201ENST00000579647 NEURL1BA8MQ27 555 aa21.64■■□□□ 1.06
CBX3P2-201ENST00000579647 SLC4A10Q6U841 1118 aa21.64■■□□□ 1.06
CBX3P2-201ENST00000579647 ZNF219Q9P2Y4 722 aaPredicted RBP21.64■■□□□ 1.06
CBX3P2-201ENST00000579647 IRS4O14654 1257 aaPredicted RBP21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 LINS1Q8NG48 757 aa21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 RPGRQ92834 1020 aaKnown RBP21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 DLEC1Q9Y238 1755 aa21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 PCCAP05165 728 aaPredicted RBP21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 CRY2Q49AN0 593 aa21.63■■□□□ 1.05
CBX3P2-201ENST00000579647 RIC1Q4ADV7 1423 aa21.62■■□□□ 1.05
CBX3P2-201ENST00000579647 PTPRCP08575 1304 aa21.62■■□□□ 1.05
CBX3P2-201ENST00000579647 BEND3Q5T5X7 828 aa21.62■■□□□ 1.05
CBX3P2-201ENST00000579647 NOB1Q9ULX3 412 aaKnown RBP21.62■■□□□ 1.05
CBX3P2-201ENST00000579647 C21orf2O43822 256 aa21.61■■□□□ 1.05
CBX3P2-201ENST00000579647 ALDH1B1P30837 517 aa21.61■■□□□ 1.05
CBX3P2-201ENST00000579647 GCKRQ14397 625 aa21.61■■□□□ 1.05
CBX3P2-201ENST00000579647 PRPF40BQ6NWY9 871 aaKnown RBP21.61■■□□□ 1.05
CBX3P2-201ENST00000579647 RBM17Q96I25 401 aaKnown RBP21.61■■□□□ 1.05
CBX3P2-201ENST00000579647 YTHDC1Q96MU7 727 aaKnown RBP21.61■■□□□ 1.05
CBX3P2-201ENST00000579647 BCAR3O75815 825 aa21.6■■□□□ 1.05
CBX3P2-201ENST00000579647 HOXA10P31260 410 aaPredicted RBP21.6■■□□□ 1.05
CBX3P2-201ENST00000579647 H7C1W4 665 aa21.59■■□□□ 1.05
CBX3P2-201ENST00000579647 BRPF1P55201 1214 aaPredicted RBP21.58■■□□□ 1.05
CBX3P2-201ENST00000579647 UBE3BQ7Z3V4 1068 aa21.58■■□□□ 1.05
CBX3P2-201ENST00000579647 SRCIN1Q9C0H9 1055 aa21.58■■□□□ 1.05
CBX3P2-201ENST00000579647 SLX4Q8IY92 1834 aa21.58■■□□□ 1.04
CBX3P2-201ENST00000579647 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
CBX3P2-201ENST00000579647 ARFGEF1Q9Y6D6 1849 aa21.57■■□□□ 1.04
CBX3P2-201ENST00000579647 CACNA1SQ13698 1873 aa21.57■■□□□ 1.04
CBX3P2-201ENST00000579647 DDX60Q8IY21 1712 aaKnown RBP21.57■■□□□ 1.04
CBX3P2-201ENST00000579647 PDE8AO60658 829 aa21.56■■□□□ 1.04
CBX3P2-201ENST00000579647 HSP90B1P14625 803 aaKnown RBP21.56■■□□□ 1.04
CBX3P2-201ENST00000579647 SF3B3Q15393 1217 aaKnown RBP21.56■■□□□ 1.04
CBX3P2-201ENST00000579647 DDX46Q7L014 1031 aaKnown RBP21.56■■□□□ 1.04
CBX3P2-201ENST00000579647 CDHR2Q9BYE9 1310 aa21.56■■□□□ 1.04
CBX3P2-201ENST00000579647 LAMB2P55268 1798 aa21.56■■□□□ 1.04
CBX3P2-201ENST00000579647 ALDH1L1O75891 902 aa21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 OLFM4Q6UX06 510 aa21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 C7orf43Q8WVR3 580 aa21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 CCDC85AQ96PX6 553 aaPredicted RBP21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 ABCC4O15439 1325 aa21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 CASP7P55210 303 aa21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 FRAT1Q92837 279 aaPredicted RBP21.55■■□□□ 1.04
CBX3P2-201ENST00000579647 API5Q9BZZ5 524 aaKnown RBP21.54■■□□□ 1.04
CBX3P2-201ENST00000579647 C9orf78Q9NZ63 289 aaPredicted RBP21.54■■□□□ 1.04
CBX3P2-201ENST00000579647 KIF16BQ96L93 1317 aa21.52■■□□□ 1.04
CBX3P2-201ENST00000579647 GRM8O00222 908 aa21.52■■□□□ 1.04
CBX3P2-201ENST00000579647 PPEF1O14829 653 aaPredicted RBP21.52■■□□□ 1.04
CBX3P2-201ENST00000579647 YY1P25490 414 aa21.52■■□□□ 1.04
CBX3P2-201ENST00000579647 RASSF7Q02833 373 aa21.52■■□□□ 1.04
CBX3P2-201ENST00000579647 GRAPQ13588 217 aa21.51■■□□□ 1.03
CBX3P2-201ENST00000579647 CCDC152Q4G0S7 254 aa21.51■■□□□ 1.03
CBX3P2-201ENST00000579647 SOGA3Q5TF21 947 aa21.51■■□□□ 1.03
CBX3P2-201ENST00000579647 SLC51AQ86UW1 340 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms