RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 INHAP05111 366 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 IGFBP4P22692 258 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 GDF10P55107 478 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 C4orf17Q53FE4 359 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 TMEM214Q6NUQ4 689 aaKnown RBP7.64□□□□□ -1.19
DDX42-210ENST00000579539 WHAMMQ8TF30 809 aa7.64□□□□□ -1.19
DDX42-210ENST00000579539 CADPSQ9ULU8 1353 aa7.63□□□□□ -1.19
DDX42-210ENST00000579539 IGHA2P01877 340 aa7.63□□□□□ -1.19
DDX42-210ENST00000579539 THBS1P07996 1170 aa7.63□□□□□ -1.19
DDX42-210ENST00000579539 DSC3Q14574 896 aa7.63□□□□□ -1.19
DDX42-210ENST00000579539 TLR1Q15399 786 aa7.63□□□□□ -1.19
DDX42-210ENST00000579539 GNASQ5JWF2 1037 aa7.63□□□□□ -1.19
DDX42-210ENST00000579539 ZNF385CQ66K41 422 aaPredicted RBP7.63□□□□□ -1.19
DDX42-210ENST00000579539 GTPBP3Q969Y2 492 aaKnown RBP7.63□□□□□ -1.19
DDX42-210ENST00000579539 CUX2O14529 1486 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 NDUFB5O43674 189 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 ADAMTS2O95450 1211 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 FANCCQ00597 558 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 SRSF11Q05519 484 aaKnown RBP7.62□□□□□ -1.19
DDX42-210ENST00000579539 GIMAP6Q6P9H5 292 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 NT5DC4Q86YG4 428 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 SAP130Q9H0E3 1048 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 PARP2Q9UGN5 583 aa7.62□□□□□ -1.19
DDX42-210ENST00000579539 A0A1B0GTH6 734 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 TCERG1O14776 1098 aaKnown RBP7.61□□□□□ -1.19
DDX42-210ENST00000579539 GPR182O15218 404 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 PRPF40AO75400 957 aaKnown RBP7.61□□□□□ -1.19
DDX42-210ENST00000579539 LDHBP07195 334 aaKnown RBP7.61□□□□□ -1.19
DDX42-210ENST00000579539 GTF2E1P29083 439 aaPredicted RBP7.61□□□□□ -1.19
DDX42-210ENST00000579539 FOXR1Q6PIV2 292 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 DPH6Q7L8W6 267 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 RHBDD1Q8TEB9 315 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 SLC4A9Q96Q91 983 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 DUSP9Q99956 384 aaKnown RBP7.61□□□□□ -1.19
DDX42-210ENST00000579539 NUCKS1Q9H1E3 243 aaKnown RBP7.61□□□□□ -1.19
DDX42-210ENST00000579539 GPAMQ9HCL2 828 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 GOLGA3Q08378 1498 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 CEP164Q9UPV0 1460 aa7.61□□□□□ -1.19
DDX42-210ENST00000579539 FZD6O60353 706 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 NEFMP07197 916 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 MAPK8P45983 427 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 SMTNP53814 917 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 EHHADHQ08426 723 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 DDX10Q13206 875 aaKnown RBP7.6□□□□□ -1.19
DDX42-210ENST00000579539 TMC4Q7Z404 712 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 TMEM87AQ8NBN3 555 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 SCG3Q8WXD2 468 aaKnown RBP7.6□□□□□ -1.19
DDX42-210ENST00000579539 SETDB2Q96T68 719 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 TANGO6Q9C0B7 1094 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 CCDC87Q9NVE4 849 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 SERTAD1Q9UHV2 236 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 BRPF3Q9ULD4 1205 aa7.6□□□□□ -1.19
DDX42-210ENST00000579539 ARHGEF15O94989 841 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 MSX1P28360 303 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 EPHA4P54764 986 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 XPCQ01831 940 aaPredicted RBP7.59□□□□□ -1.19
DDX42-210ENST00000579539 UBAP2LQ14157 1087 aaKnown RBP7.59□□□□□ -1.19
DDX42-210ENST00000579539 LYPD4Q6UWN0 246 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 TNS4Q8IZW8 715 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 FAM129BQ96TA1 746 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 DNAJC2Q99543 621 aaKnown RBP7.59□□□□□ -1.19
DDX42-210ENST00000579539 WWC3Q9ULE0 1092 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 VPS8Q8N3P4 1428 aa7.59□□□□□ -1.19
DDX42-210ENST00000579539 TNFRSF10BO14763 440 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 NCLP19338 710 aaKnown RBP7.58□□□□□ -1.2
DDX42-210ENST00000579539 EIF1AXP47813 144 aaKnown RBP7.58□□□□□ -1.2
DDX42-210ENST00000579539 DAB2P98082 770 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 MTFR1Q15390 333 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 C16orf46Q6P387 395 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 SVOPQ8N4V2 548 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 CITED4Q96RK1 184 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 TGIF2Q9GZN2 237 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 TSPAN10Q9H1Z9 355 aaPredicted RBP7.58□□□□□ -1.2
DDX42-210ENST00000579539 RUBCNLQ9H714 662 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 MRS2Q9HD23 443 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 IQSEC3Q9UPP2 1182 aaPredicted RBP7.58□□□□□ -1.2
DDX42-210ENST00000579539 IGF1RP08069 1367 aa7.58□□□□□ -1.2
DDX42-210ENST00000579539 A6NJY4 79 aa7.57□□□□□ -1.2
DDX42-210ENST00000579539 SORBS3O60504 671 aa7.57□□□□□ -1.2
DDX42-210ENST00000579539 TMC1Q8TDI8 760 aa7.57□□□□□ -1.2
DDX42-210ENST00000579539 DMRTB1Q96MA1 342 aa7.57□□□□□ -1.2
DDX42-210ENST00000579539 METTL5Q9NRN9 209 aaKnown RBP7.57□□□□□ -1.2
DDX42-210ENST00000579539 VTI1BQ9UEU0 232 aa7.57□□□□□ -1.2
DDX42-210ENST00000579539 USP3Q9Y6I4 520 aa7.57□□□□□ -1.2
DDX42-210ENST00000579539 CDK2AP1O14519 115 aa7.56□□□□□ -1.2
DDX42-210ENST00000579539 CELA2BP08218 269 aaPredicted RBP7.56□□□□□ -1.2
DDX42-210ENST00000579539 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
DDX42-210ENST00000579539 GSK3AP49840 483 aa7.56□□□□□ -1.2
DDX42-210ENST00000579539 HSP90AA2PQ14568 343 aaPredicted RBP7.56□□□□□ -1.2
DDX42-210ENST00000579539 L1TD1Q5T7N2 865 aaKnown RBP7.56□□□□□ -1.2
DDX42-210ENST00000579539 SLC43A3Q8NBI5 491 aa7.56□□□□□ -1.2
DDX42-210ENST00000579539 RNF34Q969K3 372 aa7.56□□□□□ -1.2
DDX42-210ENST00000579539 ALKBH8Q96BT7 664 aaKnown RBP7.56□□□□□ -1.2
DDX42-210ENST00000579539 CFHR5Q9BXR6 569 aa7.56□□□□□ -1.2
DDX42-210ENST00000579539 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms