RNA–Protein interactions for RNA: ENST00000579309.1

KSR1-208, Transcript of kinase suppressor of ras 1, human

TSL 5

Gene KSR1, Length 343 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KSR1-208	ENST00000579309	TRIM28	Q13263	835 aa	Known RBP	7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	CRY2	Q49AN0	593 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	ERFE	Q4G0M1	354 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	GRIPAP1	Q4V328	841 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	SLC10A5	Q5PT55	438 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	CC2D2B	Q6DHV5	1058 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	PRPF40B	Q6NWY9	871 aa	Known RBP	7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	NLRP10	Q86W26	655 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	NUTM1	Q86Y26	1132 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	C8orf58	Q8NAV2	365 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	RPGR	Q92834	1020 aa	Known RBP	7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	STK31	Q9BXU1	1019 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	RNF181	Q9P0P0	153 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	UBN2	Q6ZU65	1347 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	KDM2B	Q8NHM5	1336 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	LTBP3	Q9NS15	1303 aa		7.5	□□□□□ -1.21
KSR1-208	ENST00000579309	CCER2	I3L3R5	266 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	TWISTNB	Q3B726	338 aa	Predicted RBP	7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	CCDC93	Q567U6	631 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	RIC3	Q7Z5B4	369 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	RTKN2	Q8IZC4	609 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	C7orf43	Q8WVR3	580 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	TSR2	Q969E8	191 aa	Known RBP	7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	RBM17	Q96I25	401 aa	Known RBP	7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	CRAMP1	Q96RY5	1269 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	TMX4	Q9H1E5	349 aa	Predicted RBP	7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	MYH16	Q9H6N6	1097 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	TRMT112	Q9UI30	125 aa	Known RBP	7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	SH3TC1	Q8TE82	1336 aa		7.49	□□□□□ -1.21
KSR1-208	ENST00000579309	ABCC12	Q96J65	1359 aa		7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	NFKBIE	O00221	500 aa		7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	C1QTNF8	P60827	252 aa		7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	ISCA1	Q9BUE6	129 aa		7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	TAOK3	Q9H2K8	898 aa		7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	ZNF219	Q9P2Y4	722 aa	Predicted RBP	7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	SALL2	Q9Y467	1007 aa	Predicted RBP	7.48	□□□□□ -1.21
KSR1-208	ENST00000579309	TIAM2	Q8IVF5	1701 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	LAMB2	P55268	1798 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	BBOX1	O75936	387 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	FKBP4	Q02790	459 aa	Known RBP eCLIP	7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	RASSF7	Q02833	373 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	NEXN	Q0ZGT2	675 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	DPY19L2	Q6NUT2	758 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	KSR2	Q6VAB6	950 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	TSPYL6	Q8N831	410 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	CCDC191	Q8NCU4	936 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	ZNF526	Q8TF50	670 aa	Predicted RBP	7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	PHAX	Q9H814	394 aa	Known RBP	7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	FANCI	Q9NVI1	1328 aa		7.47	□□□□□ -1.21
KSR1-208	ENST00000579309	GLTPD2	A6NH11	291 aa		7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	SLC4A2	P04920	1241 aa		7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	DDX46	Q7L014	1031 aa	Known RBP	7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	TMC4	Q7Z404	712 aa		7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	PSMD1	Q99460	953 aa		7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	METTL22	Q9BUU2	404 aa	Predicted RBP	7.46	□□□□□ -1.22
KSR1-208	ENST00000579309	DDX60	Q8IY21	1712 aa	Known RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	SENP3-EIF4A1	A0A087X0R7	540 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	PI4KAP2	A4QPH2	592 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	ATP5J2-PTCD1	G3V325	749 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	KIF3C	O14782	793 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	PPEF1	O14829	653 aa	Predicted RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	VAMP4	O75379	141 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	TOMM70	O94826	608 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	PCCA	P05165	728 aa	Predicted RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	HCLS1	P14317	486 aa	Predicted RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	EXOSC9	Q06265	439 aa	Known RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	SF3B3	Q15393	1217 aa	Known RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	C16orf71	Q8IYS4	520 aa	Predicted RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	PI4KAP1	Q8N8J0	262 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	FAM89A	Q96GI7	184 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	MYD88	Q99836	296 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	VPS33B	Q9H267	617 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	CWC25	Q9NXE8	425 aa	Predicted RBP	7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	ZNF521	Q96K83	1311 aa		7.45	□□□□□ -1.22
KSR1-208	ENST00000579309	MYH3	P11055	1940 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309		E9PSI1	815 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	IRS4	O14654	1257 aa	Predicted RBP	7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	VEGFA	P15692	232 aa	Predicted RBP	7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	IARS	P41252	1262 aa	Known RBP	7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	PRELP	P51888	382 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	FLII	Q13045	1269 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	GRAP	Q13588	217 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	SP8	Q8IXZ3	490 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	SYNE4	Q8N205	404 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	SUPT20H	Q8NEM7	779 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	GRAPL	Q8TC17	118 aa	Predicted RBP	7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	MAP3K2	Q9Y2U5	619 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	ATP6V0A2	Q9Y487	856 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	ABCC4	O15439	1325 aa		7.44	□□□□□ -1.22
KSR1-208	ENST00000579309	SCN4A	P35499	1836 aa		7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	TAF1	P21675	1872 aa		7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	PDE8A	O60658	829 aa		7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	FKBP5	Q13451	457 aa	Predicted RBP	7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	C3orf67	Q6ZVT6	689 aa		7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	RBM46	Q8TBY0	533 aa	Known RBP	7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	JDP2	Q8WYK2	163 aa		7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	ZNF428	Q96B54	188 aa		7.43	□□□□□ -1.22
KSR1-208	ENST00000579309	RRAGC	Q9HB90	399 aa		7.43	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms