RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
PTPRM-210ENST00000578916 BCORQ6W2J9 1755 aa12.22□□□□□ -0.45
PTPRM-210ENST00000578916 NBPF26B4DH59 902 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 AOC2O75106 756 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
PTPRM-210ENST00000578916 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 CST9Q5W186 159 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 NBPF10Q6P3W6 841 aaKnown RBP12.21□□□□□ -0.45
PTPRM-210ENST00000578916 NBPF15Q8N660 670 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 RPGRQ92834 1020 aaKnown RBP12.21□□□□□ -0.45
PTPRM-210ENST00000578916 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 NYXQ9GZU5 481 aa12.21□□□□□ -0.45
PTPRM-210ENST00000578916 CA12O43570 354 aa12.2□□□□□ -0.46
PTPRM-210ENST00000578916 PRKAR2BP31323 418 aa12.2□□□□□ -0.46
PTPRM-210ENST00000578916 HLFQ16534 295 aa12.2□□□□□ -0.46
PTPRM-210ENST00000578916 NIM1KQ8IY84 436 aa12.2□□□□□ -0.46
PTPRM-210ENST00000578916 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
PTPRM-210ENST00000578916 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
PTPRM-210ENST00000578916 MCOLN1Q9GZU1 580 aa12.2□□□□□ -0.46
PTPRM-210ENST00000578916 KIF7Q2M1P5 1343 aa12.19□□□□□ -0.46
PTPRM-210ENST00000578916 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
PTPRM-210ENST00000578916 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
PTPRM-210ENST00000578916 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
PTPRM-210ENST00000578916 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
PTPRM-210ENST00000578916 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
PTPRM-210ENST00000578916 COL3A1P02461 1466 aaPredicted RBP12.19□□□□□ -0.46
PTPRM-210ENST00000578916 SNED1Q8TER0 1413 aa12.19□□□□□ -0.46
PTPRM-210ENST00000578916 TCERG1O14776 1098 aaKnown RBP12.18□□□□□ -0.46
PTPRM-210ENST00000578916 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
PTPRM-210ENST00000578916 MCM10Q7L590 875 aa12.18□□□□□ -0.46
PTPRM-210ENST00000578916 NGEFQ8N5V2 710 aa12.18□□□□□ -0.46
PTPRM-210ENST00000578916 RBM17Q96I25 401 aaKnown RBP12.18□□□□□ -0.46
PTPRM-210ENST00000578916 TMX4Q9H1E5 349 aaPredicted RBP12.18□□□□□ -0.46
PTPRM-210ENST00000578916 THSD7BQ9C0I4 1608 aa12.18□□□□□ -0.46
PTPRM-210ENST00000578916 ABCC12Q96J65 1359 aa12.18□□□□□ -0.46
PTPRM-210ENST00000578916 COL4A5P29400 1685 aa12.17□□□□□ -0.46
PTPRM-210ENST00000578916 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
PTPRM-210ENST00000578916 PPIP5K2O43314 1243 aa12.17□□□□□ -0.46
PTPRM-210ENST00000578916 HOXA10P31260 410 aaPredicted RBP12.17□□□□□ -0.46
PTPRM-210ENST00000578916 DGKZQ13574 1117 aa12.17□□□□□ -0.46
PTPRM-210ENST00000578916 SAPCD2Q86UD0 394 aa12.17□□□□□ -0.46
PTPRM-210ENST00000578916 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
PTPRM-210ENST00000578916 RSPH6AQ9H0K4 717 aa12.17□□□□□ -0.46
PTPRM-210ENST00000578916 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 BRPF1P55201 1214 aaPredicted RBP12.16□□□□□ -0.46
PTPRM-210ENST00000578916 KIF6Q6ZMV9 814 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 ZNF408Q9H9D4 720 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 GPRC5DQ9NZD1 345 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 LTBP1Q14766 1721 aa12.16□□□□□ -0.46
PTPRM-210ENST00000578916 GPTP24298 496 aa12.15□□□□□ -0.46
PTPRM-210ENST00000578916 DCTN1Q14203 1278 aa12.15□□□□□ -0.46
PTPRM-210ENST00000578916 AOC3Q16853 763 aa12.15□□□□□ -0.46
PTPRM-210ENST00000578916 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.46
PTPRM-210ENST00000578916 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
PTPRM-210ENST00000578916 VPS33BQ9H267 617 aa12.15□□□□□ -0.46
PTPRM-210ENST00000578916 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
PTPRM-210ENST00000578916 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
PTPRM-210ENST00000578916 GMPSP49915 693 aaPredicted RBP12.14□□□□□ -0.47
PTPRM-210ENST00000578916 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPRM-210ENST00000578916 CXCL9Q07325 125 aa12.14□□□□□ -0.47
PTPRM-210ENST00000578916 TAF7Q15545 349 aaPredicted RBP12.14□□□□□ -0.47
PTPRM-210ENST00000578916 SUSD4Q5VX71 490 aa12.14□□□□□ -0.47
PTPRM-210ENST00000578916 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
PTPRM-210ENST00000578916 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
PTPRM-210ENST00000578916 RRP7AQ9Y3A4 280 aaKnown RBP12.14□□□□□ -0.47
PTPRM-210ENST00000578916 NPC1L1Q9UHC9 1359 aa12.14□□□□□ -0.47
PTPRM-210ENST00000578916 RIC1Q4ADV7 1423 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
PTPRM-210ENST00000578916 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 CDC37L1Q7L3B6 337 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 SLC51AQ86UW1 340 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
PTPRM-210ENST00000578916 BCL2L13Q9BXK5 485 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 MIS18AQ9NYP9 233 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 PGAP2Q9UHJ9 254 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
PTPRM-210ENST00000578916 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
PTPRM-210ENST00000578916 NOGQ13253 232 aa12.12□□□□□ -0.47
PTPRM-210ENST00000578916 NLRP3Q96P20 1036 aa12.12□□□□□ -0.47
PTPRM-210ENST00000578916 ZBTB3Q9H5J0 574 aa12.12□□□□□ -0.47
PTPRM-210ENST00000578916 ATP6V0A2Q9Y487 856 aa12.12□□□□□ -0.47
PTPRM-210ENST00000578916 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 NTSR2O95665 410 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 MYL6BP14649 208 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 TNIP1Q15025 636 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
PTPRM-210ENST00000578916 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
PTPRM-210ENST00000578916 CDHR2Q9BYE9 1310 aa12.11□□□□□ -0.47
PTPRM-210ENST00000578916 RAD17O75943 681 aa12.1□□□□□ -0.47
PTPRM-210ENST00000578916 HIRAP54198 1017 aaPredicted RBP12.1□□□□□ -0.47
PTPRM-210ENST00000578916 HUNKP57058 714 aa12.1□□□□□ -0.47
PTPRM-210ENST00000578916 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
PTPRM-210ENST00000578916 RTFDC1Q9BY42 306 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 492.2 ms