RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 DDR1Q08345 913 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 GCKRQ14397 625 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
LINC01543-201ENST00000578367 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
LINC01543-201ENST00000578367 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
LINC01543-201ENST00000578367 ATP5J2-PTCD1G3V325 749 aa17.52■□□□□ 0.4
LINC01543-201ENST00000578367 NTSR2O95665 410 aa17.52■□□□□ 0.4
LINC01543-201ENST00000578367 SUSD4Q5VX71 490 aa17.52■□□□□ 0.4
LINC01543-201ENST00000578367 CNBD1Q8NA66 436 aa17.52■□□□□ 0.4
LINC01543-201ENST00000578367 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
LINC01543-201ENST00000578367 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
LINC01543-201ENST00000578367 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
LINC01543-201ENST00000578367 UTYO14607 1347 aa17.51■□□□□ 0.39
LINC01543-201ENST00000578367 ST5P78524 1137 aa17.51■□□□□ 0.39
LINC01543-201ENST00000578367 COL24A1Q17RW2 1714 aa17.51■□□□□ 0.39
LINC01543-201ENST00000578367 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
LINC01543-201ENST00000578367 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
LINC01543-201ENST00000578367 H7C1W4 665 aa17.5■□□□□ 0.39
LINC01543-201ENST00000578367 GTF2E1P29083 439 aaPredicted RBP17.5■□□□□ 0.39
LINC01543-201ENST00000578367 CWF19L2Q2TBE0 894 aaKnown RBP17.5■□□□□ 0.39
LINC01543-201ENST00000578367 BRIP1Q9BX63 1249 aa17.5■□□□□ 0.39
LINC01543-201ENST00000578367 ARFGEF2Q9Y6D5 1785 aa17.49■□□□□ 0.39
LINC01543-201ENST00000578367 GRM8O00222 908 aa17.49■□□□□ 0.39
LINC01543-201ENST00000578367 NPHP1O15259 732 aa17.49■□□□□ 0.39
LINC01543-201ENST00000578367 PRR5LQ6MZQ0 368 aa17.49■□□□□ 0.39
LINC01543-201ENST00000578367 CD2APQ9Y5K6 639 aa17.49■□□□□ 0.39
LINC01543-201ENST00000578367 GNAI3P08754 354 aa17.48■□□□□ 0.39
LINC01543-201ENST00000578367 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
LINC01543-201ENST00000578367 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
LINC01543-201ENST00000578367 C9orf78Q9NZ63 289 aaPredicted RBP17.48■□□□□ 0.39
LINC01543-201ENST00000578367 NUP98P52948 1817 aa17.47■□□□□ 0.39
LINC01543-201ENST00000578367 KLRG2A4D1S0 409 aaPredicted RBP17.47■□□□□ 0.39
LINC01543-201ENST00000578367 PDE6BP35913 854 aa17.47■□□□□ 0.39
LINC01543-201ENST00000578367 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
LINC01543-201ENST00000578367 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
LINC01543-201ENST00000578367 PLIN1O60240 522 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 RLBP1P12271 317 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 CASP7P55210 303 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 TGFB2P61812 414 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 AAMPQ13685 434 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 MVPQ14764 893 aaKnown RBP17.46■□□□□ 0.39
LINC01543-201ENST00000578367 USP44Q9H0E7 712 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 C10orf71Q711Q0 1435 aa17.46■□□□□ 0.39
LINC01543-201ENST00000578367 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
LINC01543-201ENST00000578367 ITPRIPQ8IWB1 547 aa17.45■□□□□ 0.38
LINC01543-201ENST00000578367 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
LINC01543-201ENST00000578367 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
LINC01543-201ENST00000578367 SUPT16HQ9Y5B9 1047 aaKnown RBP17.45■□□□□ 0.38
LINC01543-201ENST00000578367 NRXN2Q9P2S2 1712 aa17.44■□□□□ 0.38
LINC01543-201ENST00000578367 ANKRD36CQ5JPF3 1778 aa17.44■□□□□ 0.38
LINC01543-201ENST00000578367 PDE8AO60658 829 aa17.44■□□□□ 0.38
LINC01543-201ENST00000578367 UBTFL1P0CB47 393 aaPredicted RBP17.44■□□□□ 0.38
LINC01543-201ENST00000578367 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
LINC01543-201ENST00000578367 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
LINC01543-201ENST00000578367 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
LINC01543-201ENST00000578367 ZBTB7BO15156 539 aaPredicted RBP17.43■□□□□ 0.38
LINC01543-201ENST00000578367 SF3B3Q15393 1217 aaKnown RBP17.43■□□□□ 0.38
LINC01543-201ENST00000578367 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
LINC01543-201ENST00000578367 UBE3BQ7Z3V4 1068 aa17.43■□□□□ 0.38
LINC01543-201ENST00000578367 NUTM1Q86Y26 1132 aa17.43■□□□□ 0.38
LINC01543-201ENST00000578367 TNNQ9UQP3 1299 aa17.43■□□□□ 0.38
LINC01543-201ENST00000578367 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
LINC01543-201ENST00000578367 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
LINC01543-201ENST00000578367 COG6Q9Y2V7 657 aa17.41■□□□□ 0.38
LINC01543-201ENST00000578367 ABCC12Q96J65 1359 aa17.4■□□□□ 0.38
LINC01543-201ENST00000578367 H0YIN7 160 aa17.4■□□□□ 0.38
LINC01543-201ENST00000578367 GNAI2P04899 355 aa17.4■□□□□ 0.38
LINC01543-201ENST00000578367 CSF1RP07333 972 aa17.4■□□□□ 0.38
LINC01543-201ENST00000578367 HOXA10P31260 410 aaPredicted RBP17.4■□□□□ 0.38
LINC01543-201ENST00000578367 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
LINC01543-201ENST00000578367 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
LINC01543-201ENST00000578367 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
LINC01543-201ENST00000578367 LRP5O75197 1615 aa17.39■□□□□ 0.38
LINC01543-201ENST00000578367 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
LINC01543-201ENST00000578367 NPR1P16066 1061 aa17.39■□□□□ 0.37
LINC01543-201ENST00000578367 CTSWP56202 376 aa17.39■□□□□ 0.37
LINC01543-201ENST00000578367 RABL6Q3YEC7 729 aaPredicted RBP17.39■□□□□ 0.37
LINC01543-201ENST00000578367 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.37
LINC01543-201ENST00000578367 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
LINC01543-201ENST00000578367 MEIS3Q99687 375 aa17.39■□□□□ 0.37
LINC01543-201ENST00000578367 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
LINC01543-201ENST00000578367 SRGNP10124 158 aa17.38■□□□□ 0.37
LINC01543-201ENST00000578367 ALDH1B1P30837 517 aa17.38■□□□□ 0.37
LINC01543-201ENST00000578367 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
LINC01543-201ENST00000578367 SYNE4Q8N205 404 aa17.38■□□□□ 0.37
LINC01543-201ENST00000578367 FOXO4P98177 505 aa17.37■□□□□ 0.37
LINC01543-201ENST00000578367 MTX1Q13505 466 aa17.37■□□□□ 0.37
LINC01543-201ENST00000578367 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
LINC01543-201ENST00000578367 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
LINC01543-201ENST00000578367 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
LINC01543-201ENST00000578367 RBM17Q96I25 401 aaKnown RBP17.37■□□□□ 0.37
LINC01543-201ENST00000578367 SUCLG2Q96I99 432 aa17.37■□□□□ 0.37
LINC01543-201ENST00000578367 CRAMP1Q96RY5 1269 aa17.37■□□□□ 0.37
LINC01543-201ENST00000578367 TMC4Q7Z404 712 aa17.36■□□□□ 0.37
LINC01543-201ENST00000578367 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
LINC01543-201ENST00000578367 CNKSR1Q969H4 720 aa17.36■□□□□ 0.37
LINC01543-201ENST00000578367 KAZALD1Q96I82 304 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms