RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
NUP85-207ENST00000578294 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
NUP85-207ENST00000578294 C9orf131Q5VYM1 1079 aa16.7■□□□□ 0.26
NUP85-207ENST00000578294 RIC3Q7Z5B4 369 aa16.7■□□□□ 0.26
NUP85-207ENST00000578294 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
NUP85-207ENST00000578294 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
NUP85-207ENST00000578294 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
NUP85-207ENST00000578294 ARFGEF2Q9Y6D5 1785 aa16.69■□□□□ 0.26
NUP85-207ENST00000578294 C21orf2O43822 256 aa16.69■□□□□ 0.26
NUP85-207ENST00000578294 LMNB1P20700 586 aa16.69■□□□□ 0.26
NUP85-207ENST00000578294 HOXA10P31260 410 aaPredicted RBP16.69■□□□□ 0.26
NUP85-207ENST00000578294 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
NUP85-207ENST00000578294 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
NUP85-207ENST00000578294 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
NUP85-207ENST00000578294 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
NUP85-207ENST00000578294 RBM17Q96I25 401 aaKnown RBP16.68■□□□□ 0.26
NUP85-207ENST00000578294 PHAXQ9H814 394 aaKnown RBP16.68■□□□□ 0.26
NUP85-207ENST00000578294 GPBP1L1Q9HC44 474 aaPredicted RBP16.68■□□□□ 0.26
NUP85-207ENST00000578294 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
NUP85-207ENST00000578294 LTBP3Q9NS15 1303 aa16.68■□□□□ 0.26
NUP85-207ENST00000578294 HSP90B1P14625 803 aaKnown RBP16.67■□□□□ 0.26
NUP85-207ENST00000578294 GRIPAP1Q4V328 841 aa16.67■□□□□ 0.26
NUP85-207ENST00000578294 CCDC93Q567U6 631 aa16.67■□□□□ 0.26
NUP85-207ENST00000578294 CRAMP1Q96RY5 1269 aa16.67■□□□□ 0.26
NUP85-207ENST00000578294 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
NUP85-207ENST00000578294 TNRC6CQ9HCJ0 1690 aaKnown RBP16.66■□□□□ 0.26
NUP85-207ENST00000578294 NFKBIEO00221 500 aa16.66■□□□□ 0.26
NUP85-207ENST00000578294 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
NUP85-207ENST00000578294 DIEXFQ68CQ4 756 aaKnown RBP16.66■□□□□ 0.26
NUP85-207ENST00000578294 CC2D2BQ6DHV5 1058 aa16.66■□□□□ 0.26
NUP85-207ENST00000578294 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
NUP85-207ENST00000578294 TAOK3Q9H2K8 898 aa16.66■□□□□ 0.26
NUP85-207ENST00000578294 VAMP4O75379 141 aa16.65■□□□□ 0.26
NUP85-207ENST00000578294 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
NUP85-207ENST00000578294 RASSF7Q02833 373 aa16.65■□□□□ 0.26
NUP85-207ENST00000578294 CCDC191Q8NCU4 936 aa16.65■□□□□ 0.26
NUP85-207ENST00000578294 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
NUP85-207ENST00000578294 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
NUP85-207ENST00000578294 SLX4Q8IY92 1834 aa16.64■□□□□ 0.25
NUP85-207ENST00000578294 NEXNQ0ZGT2 675 aa16.64■□□□□ 0.25
NUP85-207ENST00000578294 KSR2Q6VAB6 950 aa16.64■□□□□ 0.25
NUP85-207ENST00000578294 METTL22Q9BUU2 404 aaPredicted RBP16.64■□□□□ 0.25
NUP85-207ENST00000578294 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
NUP85-207ENST00000578294 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
NUP85-207ENST00000578294 E9PSI1 815 aa16.63■□□□□ 0.25
NUP85-207ENST00000578294 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
NUP85-207ENST00000578294 MYD88Q99836 296 aa16.63■□□□□ 0.25
NUP85-207ENST00000578294 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
NUP85-207ENST00000578294 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
NUP85-207ENST00000578294 ZNF526Q8TF50 670 aaPredicted RBP16.62■□□□□ 0.25
NUP85-207ENST00000578294 CWC25Q9NXE8 425 aaPredicted RBP16.62■□□□□ 0.25
NUP85-207ENST00000578294 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
NUP85-207ENST00000578294 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
NUP85-207ENST00000578294 SBF1O95248 1867 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 CACNA1SQ13698 1873 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 PI4KAP2A4QPH2 592 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 PPEF1O14829 653 aaPredicted RBP16.61■□□□□ 0.25
NUP85-207ENST00000578294 BBOX1O75936 387 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 HCLS1P14317 486 aaPredicted RBP16.61■□□□□ 0.25
NUP85-207ENST00000578294 FKBP4Q02790 459 aaKnown RBP eCLIP16.61■□□□□ 0.25
NUP85-207ENST00000578294 FLIIQ13045 1269 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
NUP85-207ENST00000578294 TMC4Q7Z404 712 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 PI4KAP1Q8N8J0 262 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
NUP85-207ENST00000578294 TCERG1O14776 1098 aaKnown RBP16.6■□□□□ 0.25
NUP85-207ENST00000578294 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
NUP85-207ENST00000578294 PSMD1Q99460 953 aa16.6■□□□□ 0.25
NUP85-207ENST00000578294 IRS4O14654 1257 aaPredicted RBP16.59■□□□□ 0.25
NUP85-207ENST00000578294 PCCAP05165 728 aaPredicted RBP16.59■□□□□ 0.25
NUP85-207ENST00000578294 FKBP5Q13451 457 aaPredicted RBP16.59■□□□□ 0.25
NUP85-207ENST00000578294 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
NUP85-207ENST00000578294 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
NUP85-207ENST00000578294 CACNA1FO60840 1977 aa16.58■□□□□ 0.25
NUP85-207ENST00000578294 PRELPP51888 382 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 C1QTNF8P60827 252 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 GRAPQ13588 217 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 G2E3Q7L622 706 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 GRAPLQ8TC17 118 aaPredicted RBP16.58■□□□□ 0.24
NUP85-207ENST00000578294 ZNF428Q96B54 188 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 ATP6V0A2Q9Y487 856 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 ABCC4O15439 1325 aa16.58■□□□□ 0.24
NUP85-207ENST00000578294 CDHR2Q9BYE9 1310 aa16.57■□□□□ 0.24
NUP85-207ENST00000578294 GLTPD2A6NH11 291 aa16.57■□□□□ 0.24
NUP85-207ENST00000578294 SLFN5Q08AF3 891 aa16.57■□□□□ 0.24
NUP85-207ENST00000578294 DNAAF4Q8WXU2 420 aa16.57■□□□□ 0.24
NUP85-207ENST00000578294 LAMB2P55268 1798 aa16.56■□□□□ 0.24
NUP85-207ENST00000578294 TIAM2Q8IVF5 1701 aa16.56■□□□□ 0.24
NUP85-207ENST00000578294 SNED1Q8TER0 1413 aa16.56■□□□□ 0.24
NUP85-207ENST00000578294 PDE8AO60658 829 aa16.56■□□□□ 0.24
NUP85-207ENST00000578294 SP8Q8IXZ3 490 aa16.56■□□□□ 0.24
NUP85-207ENST00000578294 VPS33BQ9H267 617 aa16.56■□□□□ 0.24
NUP85-207ENST00000578294 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
NUP85-207ENST00000578294 NEURL1BA8MQ27 555 aa16.55■□□□□ 0.24
NUP85-207ENST00000578294 IGKV5-2P06315 115 aa16.55■□□□□ 0.24
NUP85-207ENST00000578294 IARSP41252 1262 aaKnown RBP16.55■□□□□ 0.24
NUP85-207ENST00000578294 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
NUP85-207ENST00000578294 MIER1Q8N108 512 aa16.55■□□□□ 0.24
NUP85-207ENST00000578294 SUPT20HQ8NEM7 779 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms