RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 COL4A5P29400 1685 aa11.17□□□□□ -0.62
SLC46A1-201ENST00000578217 C7P10643 843 aa11.16□□□□□ -0.62
SLC46A1-201ENST00000578217 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
SLC46A1-201ENST00000578217 GPR101Q96P66 508 aaPredicted RBP11.16□□□□□ -0.62
SLC46A1-201ENST00000578217 BRIP1Q9BX63 1249 aa11.16□□□□□ -0.62
SLC46A1-201ENST00000578217 LGR6Q9HBX8 967 aa11.16□□□□□ -0.62
SLC46A1-201ENST00000578217 HACL1Q9UJ83 578 aa11.16□□□□□ -0.62
SLC46A1-201ENST00000578217 STK25O00506 426 aa11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 SOX10P56693 466 aa11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 PAXIP1Q6ZW49 1069 aaPredicted RBP11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 SLC51AQ86UW1 340 aa11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 SLC39A7Q92504 469 aa11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
SLC46A1-201ENST00000578217 SRGNP10124 158 aa11.14□□□□□ -0.63
SLC46A1-201ENST00000578217 DGKZQ13574 1117 aa11.14□□□□□ -0.63
SLC46A1-201ENST00000578217 ZIC5Q96T25 663 aa11.14□□□□□ -0.63
SLC46A1-201ENST00000578217 PDE6BP35913 854 aa11.13□□□□□ -0.63
SLC46A1-201ENST00000578217 EIF5P55010 431 aaKnown RBP11.13□□□□□ -0.63
SLC46A1-201ENST00000578217 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
SLC46A1-201ENST00000578217 SCN7AQ01118 1682 aa11.13□□□□□ -0.63
SLC46A1-201ENST00000578217 TRPM7Q96QT4 1865 aa11.12□□□□□ -0.63
SLC46A1-201ENST00000578217 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
SLC46A1-201ENST00000578217 STYK1Q6J9G0 422 aa11.12□□□□□ -0.63
SLC46A1-201ENST00000578217 SLC52A2Q9HAB3 445 aa11.12□□□□□ -0.63
SLC46A1-201ENST00000578217 TBC1D2BQ9UPU7 963 aa11.12□□□□□ -0.63
SLC46A1-201ENST00000578217 FZD9O00144 591 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 EPS15P42566 896 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 BEGAINQ9BUH8 593 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 MRC1P22897 1456 aa11.11□□□□□ -0.63
SLC46A1-201ENST00000578217 SNED1Q8TER0 1413 aa11.1□□□□□ -0.63
SLC46A1-201ENST00000578217 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
SLC46A1-201ENST00000578217 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
SLC46A1-201ENST00000578217 PNMA8AQ86V59 439 aaPredicted RBP11.1□□□□□ -0.63
SLC46A1-201ENST00000578217 EFCAB3Q8N7B9 438 aa11.1□□□□□ -0.63
SLC46A1-201ENST00000578217 UBR2Q8IWV8 1755 aa11.1□□□□□ -0.63
SLC46A1-201ENST00000578217 MKI67P46013 3256 aaKnown RBP11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 ECE1P42892 770 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 SCNN1DP51172 638 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 CCDC93Q567U6 631 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 IER5LQ5T953 404 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 PRPF38BQ5VTL8 546 aaKnown RBP11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 CNBD1Q8NA66 436 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 MASTLQ96GX5 879 aa11.09□□□□□ -0.63
SLC46A1-201ENST00000578217 RNMTO43148 476 aaKnown RBP11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 CAMTA2O94983 1202 aa11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 MAP2K2P36507 400 aa11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 SULT6B1Q6IMI4 303 aa11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 MAMSTRQ6ZN01 415 aa11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
SLC46A1-201ENST00000578217 IARSP41252 1262 aaKnown RBP11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 IRX5P78411 483 aaPredicted RBP11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 SOGA3Q5TF21 947 aa11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 DLK2Q6UY11 383 aa11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 GPC2Q8N158 579 aa11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 SYNE4Q8N205 404 aa11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
SLC46A1-201ENST00000578217 BCORQ6W2J9 1755 aa11.06□□□□□ -0.64
SLC46A1-201ENST00000578217 A1BGP04217 495 aa11.06□□□□□ -0.64
SLC46A1-201ENST00000578217 PIP4K2AP48426 406 aaPredicted RBP11.06□□□□□ -0.64
SLC46A1-201ENST00000578217 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
SLC46A1-201ENST00000578217 BRPF1P55201 1214 aaPredicted RBP11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 MKRN3Q13064 507 aaKnown RBP11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 AKAP4Q5JQC9 854 aa11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 ZNF496Q96IT1 587 aaPredicted RBP11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 SETDB2Q96T68 719 aa11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 GLIS2Q9BZE0 524 aaPredicted RBP11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 COLQQ9Y215 455 aaPredicted RBP11.05□□□□□ -0.64
SLC46A1-201ENST00000578217 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
SLC46A1-201ENST00000578217 CA12O43570 354 aa11.04□□□□□ -0.64
SLC46A1-201ENST00000578217 CELF2O95319 508 aaKnown RBP11.04□□□□□ -0.64
SLC46A1-201ENST00000578217 NPR1P16066 1061 aa11.04□□□□□ -0.64
SLC46A1-201ENST00000578217 IL13P35225 146 aa11.04□□□□□ -0.64
SLC46A1-201ENST00000578217 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
SLC46A1-201ENST00000578217 A0A087WZG4 1122 aa11.03□□□□□ -0.64
SLC46A1-201ENST00000578217 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
SLC46A1-201ENST00000578217 ST5P78524 1137 aa11.03□□□□□ -0.64
SLC46A1-201ENST00000578217 CEP290O15078 2479 aa11.03□□□□□ -0.64
SLC46A1-201ENST00000578217 A0A0C4DFX4 3053 aa11.02□□□□□ -0.65
SLC46A1-201ENST00000578217 NPHP1O15259 732 aa11.02□□□□□ -0.65
SLC46A1-201ENST00000578217 STARD3NLO95772 234 aa11.02□□□□□ -0.65
SLC46A1-201ENST00000578217 RTKN2Q8IZC4 609 aa11.02□□□□□ -0.65
SLC46A1-201ENST00000578217 MFRPQ9BY79 579 aa11.02□□□□□ -0.65
SLC46A1-201ENST00000578217 HTTP42858 3142 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 TRIOBPQ9H2D6 2365 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 SHTN1A0MZ66 631 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 KCNQ3O43525 872 aa11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 IL6STP40189 918 aaPredicted RBP11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 HIRAP54198 1017 aaPredicted RBP11.01□□□□□ -0.65
SLC46A1-201ENST00000578217 MTHFSDQ2M296 383 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms