RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 GDPD2Q9HCC8 539 aa21.18■□□□□ 0.98
ERBB2-205ENST00000578199 NDUFB9Q9Y6M9 179 aa21.18■□□□□ 0.98
ERBB2-205ENST00000578199 DCCP43146 1447 aa21.18■□□□□ 0.98
ERBB2-205ENST00000578199 COL9A3Q14050 684 aaPredicted RBP21.17■□□□□ 0.98
ERBB2-205ENST00000578199 LARGE1O95461 756 aa21.17■□□□□ 0.98
ERBB2-205ENST00000578199 JAKMIP1Q96N16 626 aaKnown RBP21.17■□□□□ 0.98
ERBB2-205ENST00000578199 TOM1L2Q6ZVM7 507 aa21.16■□□□□ 0.98
ERBB2-205ENST00000578199 A0A087WZG4 1122 aa21.16■□□□□ 0.98
ERBB2-205ENST00000578199 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
ERBB2-205ENST00000578199 TMEM63CQ9P1W3 806 aa21.16■□□□□ 0.98
ERBB2-205ENST00000578199 A0A0D9SFI3 127 aa21.15■□□□□ 0.98
ERBB2-205ENST00000578199 NBPF26B4DH59 902 aa21.15■□□□□ 0.98
ERBB2-205ENST00000578199 PTPN12Q05209 780 aaKnown RBP21.15■□□□□ 0.98
ERBB2-205ENST00000578199 TFCP2Q12800 502 aa21.15■□□□□ 0.98
ERBB2-205ENST00000578199 NBPF14Q5TI25 921 aa21.15■□□□□ 0.98
ERBB2-205ENST00000578199 NBPF10Q6P3W6 841 aaKnown RBP21.15■□□□□ 0.98
ERBB2-205ENST00000578199 NBPF15Q8N660 670 aa21.15■□□□□ 0.98
ERBB2-205ENST00000578199 NASPP49321 788 aaPredicted RBP21.14■□□□□ 0.98
ERBB2-205ENST00000578199 FSD1Q9BTV5 496 aa21.14■□□□□ 0.98
ERBB2-205ENST00000578199 LIMCH1Q9UPQ0 1083 aa21.14■□□□□ 0.98
ERBB2-205ENST00000578199 CCDC9Q9Y3X0 531 aaKnown RBP21.14■□□□□ 0.98
ERBB2-205ENST00000578199 RFX5P48382 616 aaPredicted RBP21.14■□□□□ 0.97
ERBB2-205ENST00000578199 PRIM1P49642 420 aaKnown RBP21.14■□□□□ 0.97
ERBB2-205ENST00000578199 ZNF445P59923 1031 aa21.14■□□□□ 0.97
ERBB2-205ENST00000578199 RBM8AQ9Y5S9 174 aaKnown RBP21.14■□□□□ 0.97
ERBB2-205ENST00000578199 CCDC171Q6TFL3 1326 aa21.14■□□□□ 0.97
ERBB2-205ENST00000578199 CHGBP05060 677 aa21.13■□□□□ 0.97
ERBB2-205ENST00000578199 KCNJ4P48050 445 aa21.13■□□□□ 0.97
ERBB2-205ENST00000578199 NECTIN1Q15223 517 aa21.13■□□□□ 0.97
ERBB2-205ENST00000578199 TPRNQ4KMQ1 711 aa21.13■□□□□ 0.97
ERBB2-205ENST00000578199 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
ERBB2-205ENST00000578199 ZCRB1Q8TBF4 217 aaKnown RBP21.13■□□□□ 0.97
ERBB2-205ENST00000578199 MRC1P22897 1456 aa21.13■□□□□ 0.97
ERBB2-205ENST00000578199 A1BGP04217 495 aa21.12■□□□□ 0.97
ERBB2-205ENST00000578199 DBNLQ9UJU6 430 aaKnown RBP21.12■□□□□ 0.97
ERBB2-205ENST00000578199 CPDO75976 1380 aa21.12■□□□□ 0.97
ERBB2-205ENST00000578199 RPAP1Q9BWH6 1393 aaPredicted RBP21.12■□□□□ 0.97
ERBB2-205ENST00000578199 AFDNP55196 1824 aaKnown RBP21.12■□□□□ 0.97
ERBB2-205ENST00000578199 PKD1L3Q7Z443 1732 aa21.12■□□□□ 0.97
ERBB2-205ENST00000578199 RBSNQ9H1K0 784 aa21.12■□□□□ 0.97
ERBB2-205ENST00000578199 PDRG1Q9NUG6 133 aa21.12■□□□□ 0.97
ERBB2-205ENST00000578199 TAF6LQ9Y6J9 622 aa21.12■□□□□ 0.97
ERBB2-205ENST00000578199 SYCE3A1L190 88 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 GADD45BO75293 160 aaPredicted RBP21.11■□□□□ 0.97
ERBB2-205ENST00000578199 CREB3L3Q68CJ9 461 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 CCDC83Q8IWF9 413 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 COPRSQ9NQ92 184 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 CHMP3Q9Y3E7 222 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 ZNF589Q86UQ0 364 aaPredicted RBP21.11■□□□□ 0.97
ERBB2-205ENST00000578199 PLBD2Q8NHP8 589 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
ERBB2-205ENST00000578199 LMBR1LQ6UX01 489 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 MAP4K1Q92918 833 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 TCEANC2Q96MN5 208 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 WDR17Q8IZU2 1322 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 TNNI3KQ59H18 835 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 ZSWIM6Q9HCJ5 1215 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 CYP46A1Q9Y6A2 500 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 FPGT-TNNI3KV9GXZ4 949 aa21.1■□□□□ 0.97
ERBB2-205ENST00000578199 TCHHQ07283 1943 aa21.09■□□□□ 0.97
ERBB2-205ENST00000578199 ERBB4Q15303 1308 aa21.09■□□□□ 0.97
ERBB2-205ENST00000578199 WDR33Q9C0J8 1336 aaKnown RBP21.09■□□□□ 0.97
ERBB2-205ENST00000578199 ARFGEF2Q9Y6D5 1785 aa21.09■□□□□ 0.97
ERBB2-205ENST00000578199 CASP7P55210 303 aa21.09■□□□□ 0.97
ERBB2-205ENST00000578199 RABL6Q3YEC7 729 aaPredicted RBP21.09■□□□□ 0.97
ERBB2-205ENST00000578199 DBNDD2Q9BQY9 259 aa21.09■□□□□ 0.97
ERBB2-205ENST00000578199 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
ERBB2-205ENST00000578199 XIRP1Q702N8 1843 aaKnown RBP21.09■□□□□ 0.97
ERBB2-205ENST00000578199 SYT1P21579 422 aa21.08■□□□□ 0.97
ERBB2-205ENST00000578199 USP48Q86UV5 1035 aa21.08■□□□□ 0.97
ERBB2-205ENST00000578199 NECAB1Q8N987 351 aa21.08■□□□□ 0.97
ERBB2-205ENST00000578199 SMC3Q9UQE7 1217 aa21.08■□□□□ 0.97
ERBB2-205ENST00000578199 SLC27A2O14975 620 aa21.08■□□□□ 0.96
ERBB2-205ENST00000578199 ZKSCAN1P17029 563 aaPredicted RBP21.08■□□□□ 0.96
ERBB2-205ENST00000578199 VPS53Q5VIR6 699 aa21.08■□□□□ 0.96
ERBB2-205ENST00000578199 KCNB2Q92953 911 aa21.08■□□□□ 0.96
ERBB2-205ENST00000578199 DNAJC2Q99543 621 aaKnown RBP21.08■□□□□ 0.96
ERBB2-205ENST00000578199 PCDH11XQ9BZA7 1347 aa21.07■□□□□ 0.96
ERBB2-205ENST00000578199 PCDH11YQ9BZA8 1340 aa21.07■□□□□ 0.96
ERBB2-205ENST00000578199 GLI3P10071 1580 aa21.07■□□□□ 0.96
ERBB2-205ENST00000578199 TRIM44Q96DX7 344 aaPredicted RBP21.07■□□□□ 0.96
ERBB2-205ENST00000578199 HIP1O00291 1037 aa21.07■□□□□ 0.96
ERBB2-205ENST00000578199 ME3Q16798 604 aa21.07■□□□□ 0.96
ERBB2-205ENST00000578199 SLAIN2Q9P270 581 aa21.07■□□□□ 0.96
ERBB2-205ENST00000578199 ABCC6O95255 1503 aa21.06■□□□□ 0.96
ERBB2-205ENST00000578199 FOXO4P98177 505 aa21.06■□□□□ 0.96
ERBB2-205ENST00000578199 ST3GAL1Q11201 340 aa21.06■□□□□ 0.96
ERBB2-205ENST00000578199 CNPY2Q9Y2B0 182 aa21.06■□□□□ 0.96
ERBB2-205ENST00000578199 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.06■□□□□ 0.96
ERBB2-205ENST00000578199 STX6O43752 255 aa21.06■□□□□ 0.96
ERBB2-205ENST00000578199 GJB2P29033 226 aa21.06■□□□□ 0.96
ERBB2-205ENST00000578199 ZSCAN22P10073 491 aaPredicted RBP21.05■□□□□ 0.96
ERBB2-205ENST00000578199 SEC62Q99442 399 aaKnown RBP21.05■□□□□ 0.96
ERBB2-205ENST00000578199 TM6SF1Q9BZW5 370 aa21.05■□□□□ 0.96
ERBB2-205ENST00000578199 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
ERBB2-205ENST00000578199 CCDC129Q6ZRS4 1044 aa21.05■□□□□ 0.96
ERBB2-205ENST00000578199 ZNF330Q9Y3S2 320 aaPredicted RBP21.05■□□□□ 0.96
ERBB2-205ENST00000578199 ATP5JP18859 108 aa21.04■□□□□ 0.96
ERBB2-205ENST00000578199 ZNF335Q9H4Z2 1342 aaPredicted RBP21.04■□□□□ 0.96
ERBB2-205ENST00000578199 H7C1W4 665 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms