RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 DDX58O95786 925 aaKnown RBP28.48■■■□□ 2.15
SMARCD2-206ENST00000577990 ERFEQ4G0M1 354 aa28.48■■■□□ 2.15
SMARCD2-206ENST00000577990 C9orf131Q5VYM1 1079 aa28.48■■■□□ 2.15
SMARCD2-206ENST00000577990 NLRP10Q86W26 655 aa28.48■■■□□ 2.15
SMARCD2-206ENST00000577990 UTP14AQ9BVJ6 771 aaKnown RBP28.48■■■□□ 2.15
SMARCD2-206ENST00000577990 CACNA1FO60840 1977 aa28.48■■■□□ 2.15
SMARCD2-206ENST00000577990 RIC1Q4ADV7 1423 aa28.47■■■□□ 2.15
SMARCD2-206ENST00000577990 SLC4A2P04920 1241 aa28.47■■■□□ 2.15
SMARCD2-206ENST00000577990 SLFN5Q08AF3 891 aa28.47■■■□□ 2.15
SMARCD2-206ENST00000577990 TTLL6Q8N841 843 aa28.47■■■□□ 2.15
SMARCD2-206ENST00000577990 ZNF622Q969S3 477 aaKnown RBP eCLIP28.47■■■□□ 2.15
SMARCD2-206ENST00000577990 CEP350Q5VT06 3117 aa28.46■■■□□ 2.15
SMARCD2-206ENST00000577990 TNRC6CQ9HCJ0 1690 aaKnown RBP28.46■■■□□ 2.15
SMARCD2-206ENST00000577990 KLRG2A4D1S0 409 aaPredicted RBP28.46■■■□□ 2.15
SMARCD2-206ENST00000577990 SRGNP10124 158 aa28.46■■■□□ 2.15
SMARCD2-206ENST00000577990 ISCA1Q9BUE6 129 aa28.46■■■□□ 2.15
SMARCD2-206ENST00000577990 RNF123Q5XPI4 1314 aa28.45■■■□□ 2.15
SMARCD2-206ENST00000577990 RASSF7Q02833 373 aa28.45■■■□□ 2.14
SMARCD2-206ENST00000577990 MASTLQ96GX5 879 aa28.45■■■□□ 2.14
SMARCD2-206ENST00000577990 STYK1Q6J9G0 422 aa28.44■■■□□ 2.14
SMARCD2-206ENST00000577990 G2E3Q7L622 706 aa28.44■■■□□ 2.14
SMARCD2-206ENST00000577990 CDCA7LQ96GN5 454 aa28.44■■■□□ 2.14
SMARCD2-206ENST00000577990 ATP5J2-PTCD1G3V325 749 aa28.43■■■□□ 2.14
SMARCD2-206ENST00000577990 RNF181Q9P0P0 153 aa28.43■■■□□ 2.14
SMARCD2-206ENST00000577990 CNKSR1Q969H4 720 aa28.42■■■□□ 2.14
SMARCD2-206ENST00000577990 TRMT112Q9UI30 125 aaKnown RBP28.42■■■□□ 2.14
SMARCD2-206ENST00000577990 KIF3CO14782 793 aa28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 NPR1P16066 1061 aa28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 FLIIQ13045 1269 aa28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 TRIM28Q13263 835 aaKnown RBP28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 KSR2Q6VAB6 950 aa28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 MYD88Q99836 296 aa28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 MAP3K2Q9Y2U5 619 aa28.41■■■□□ 2.14
SMARCD2-206ENST00000577990 PI4KAP2A4QPH2 592 aa28.4■■■□□ 2.14
SMARCD2-206ENST00000577990 PI4KAP1Q8N8J0 262 aa28.4■■■□□ 2.14
SMARCD2-206ENST00000577990 METTL22Q9BUU2 404 aaPredicted RBP28.4■■■□□ 2.14
SMARCD2-206ENST00000577990 SLX4Q8IY92 1834 aa28.4■■■□□ 2.14
SMARCD2-206ENST00000577990 SH3TC1Q8TE82 1336 aa28.4■■■□□ 2.14
SMARCD2-206ENST00000577990 CRY2Q49AN0 593 aa28.39■■■□□ 2.14
SMARCD2-206ENST00000577990 SLC10A5Q5PT55 438 aa28.39■■■□□ 2.14
SMARCD2-206ENST00000577990 TIAM2Q8IVF5 1701 aa28.39■■■□□ 2.14
SMARCD2-206ENST00000577990 TRMT2AQ8IZ69 625 aaKnown RBP28.39■■■□□ 2.14
SMARCD2-206ENST00000577990 ZNF219Q9P2Y4 722 aaPredicted RBP28.39■■■□□ 2.14
SMARCD2-206ENST00000577990 ZNF428Q96B54 188 aa28.38■■■□□ 2.13
SMARCD2-206ENST00000577990 NMRK2Q9NPI5 230 aa28.38■■■□□ 2.13
SMARCD2-206ENST00000577990 HNRNPUQ00839 825 aaKnown RBP eCLIP28.37■■■□□ 2.13
SMARCD2-206ENST00000577990 FKBP5Q13451 457 aaPredicted RBP28.37■■■□□ 2.13
SMARCD2-206ENST00000577990 PRPF40BQ6NWY9 871 aaKnown RBP28.37■■■□□ 2.13
SMARCD2-206ENST00000577990 FER1L6Q2WGJ9 1857 aa28.37■■■□□ 2.13
SMARCD2-206ENST00000577990 PRELPP51888 382 aa28.36■■■□□ 2.13
SMARCD2-206ENST00000577990 SYNE4Q8N205 404 aa28.36■■■□□ 2.13
SMARCD2-206ENST00000577990 NLRP3Q96P20 1036 aa28.36■■■□□ 2.13
SMARCD2-206ENST00000577990 C3orf67Q6ZVT6 689 aa28.35■■■□□ 2.13
SMARCD2-206ENST00000577990 CCDC191Q8NCU4 936 aa28.35■■■□□ 2.13
SMARCD2-206ENST00000577990 RPGRQ92834 1020 aaKnown RBP28.35■■■□□ 2.13
SMARCD2-206ENST00000577990 HCLS1P14317 486 aaPredicted RBP28.34■■■□□ 2.13
SMARCD2-206ENST00000577990 LAMB2P55268 1798 aa28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 NFKBIEO00221 500 aa28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 C21orf2O43822 256 aa28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 ALDH1B1P30837 517 aa28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 NEXNQ0ZGT2 675 aa28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 FAM89AQ96GI7 184 aa28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 CWC25Q9NXE8 425 aaPredicted RBP28.33■■■□□ 2.13
SMARCD2-206ENST00000577990 DDX60Q8IY21 1712 aaKnown RBP28.32■■■□□ 2.12
SMARCD2-206ENST00000577990 HOXA10P31260 410 aaPredicted RBP28.32■■■□□ 2.12
SMARCD2-206ENST00000577990 DICER1Q9UPY3 1922 aaKnown RBP28.31■■■□□ 2.12
SMARCD2-206ENST00000577990 IGKV5-2P06315 115 aa28.31■■■□□ 2.12
SMARCD2-206ENST00000577990 LMNB1P20700 586 aa28.31■■■□□ 2.12
SMARCD2-206ENST00000577990 ZBTB38Q8NAP3 1195 aaPredicted RBP28.31■■■□□ 2.12
SMARCD2-206ENST00000577990 DNAAF4Q8WXU2 420 aa28.31■■■□□ 2.12
SMARCD2-206ENST00000577990 RBM17Q96I25 401 aaKnown RBP28.31■■■□□ 2.12
SMARCD2-206ENST00000577990 RTL5Q5HYW3 569 aaPredicted RBP28.29■■■□□ 2.12
SMARCD2-206ENST00000577990 SOGA3Q5TF21 947 aa28.29■■■□□ 2.12
SMARCD2-206ENST00000577990 CRAMP1Q96RY5 1269 aa28.29■■■□□ 2.12
SMARCD2-206ENST00000577990 IRS4O14654 1257 aaPredicted RBP28.28■■■□□ 2.12
SMARCD2-206ENST00000577990 PCCAP05165 728 aaPredicted RBP28.28■■■□□ 2.12
SMARCD2-206ENST00000577990 CT47B1P0C2W7 299 aaPredicted RBP28.28■■■□□ 2.12
SMARCD2-206ENST00000577990 C7orf43Q8WVR3 580 aa28.28■■■□□ 2.12
SMARCD2-206ENST00000577990 KDM2BQ8NHM5 1336 aa28.27■■■□□ 2.12
SMARCD2-206ENST00000577990 NEURL1BA8MQ27 555 aa28.27■■■□□ 2.12
SMARCD2-206ENST00000577990 CWF19L2Q2TBE0 894 aaKnown RBP28.27■■■□□ 2.12
SMARCD2-206ENST00000577990 MRPL50Q8N5N7 158 aaKnown RBP28.27■■■□□ 2.12
SMARCD2-206ENST00000577990 SSH1Q8WYL5 1049 aa28.26■■■□□ 2.11
SMARCD2-206ENST00000577990 HSP90B1P14625 803 aaKnown RBP28.25■■■□□ 2.11
SMARCD2-206ENST00000577990 HSPA6P17066 643 aa28.25■■■□□ 2.11
SMARCD2-206ENST00000577990 ALDH1L2Q3SY69 923 aa28.25■■■□□ 2.11
SMARCD2-206ENST00000577990 CCDC93Q567U6 631 aa28.25■■■□□ 2.11
SMARCD2-206ENST00000577990 F6X3S4 739 aa28.24■■■□□ 2.11
SMARCD2-206ENST00000577990 TOMM70O94826 608 aa28.24■■■□□ 2.11
SMARCD2-206ENST00000577990 LINS1Q8NG48 757 aa28.24■■■□□ 2.11
SMARCD2-206ENST00000577990 RRAGCQ9HB90 399 aa28.24■■■□□ 2.11
SMARCD2-206ENST00000577990 ABCC4O15439 1325 aa28.23■■■□□ 2.11
SMARCD2-206ENST00000577990 SF3B3Q15393 1217 aaKnown RBP28.23■■■□□ 2.11
SMARCD2-206ENST00000577990 JARID2Q92833 1246 aaPredicted RBP28.23■■■□□ 2.11
SMARCD2-206ENST00000577990 ZBED9Q6R2W3 1325 aa28.22■■■□□ 2.11
SMARCD2-206ENST00000577990 CDHR2Q9BYE9 1310 aa28.22■■■□□ 2.11
SMARCD2-206ENST00000577990 ZC3H4Q9UPT8 1303 aaKnown RBP28.22■■■□□ 2.11
SMARCD2-206ENST00000577990 DDX46Q7L014 1031 aaKnown RBP28.22■■■□□ 2.11
SMARCD2-206ENST00000577990 BCL2L13Q9BXK5 485 aa28.22■■■□□ 2.11
SMARCD2-206ENST00000577990 TAOK3Q9H2K8 898 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms