RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 RWDD1Q9H446 243 aaPredicted RBP20.64■□□□□ 0.89
ERCC4-208ENST00000576348 ANO8Q9HCE9 1232 aaPredicted RBP20.64■□□□□ 0.89
ERCC4-208ENST00000576348 TRMT112Q9UI30 125 aaKnown RBP20.64■□□□□ 0.89
ERCC4-208ENST00000576348 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
ERCC4-208ENST00000576348 RTL5Q5HYW3 569 aaPredicted RBP20.63■□□□□ 0.89
ERCC4-208ENST00000576348 UTP14AQ9BVJ6 771 aaKnown RBP20.63■□□□□ 0.89
ERCC4-208ENST00000576348 NUP188Q5SRE5 1749 aa20.62■□□□□ 0.89
ERCC4-208ENST00000576348 UTYO14607 1347 aa20.62■□□□□ 0.89
ERCC4-208ENST00000576348 NPHP1O15259 732 aa20.62■□□□□ 0.89
ERCC4-208ENST00000576348 COL23A1Q86Y22 540 aaPredicted RBP20.62■□□□□ 0.89
ERCC4-208ENST00000576348 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
ERCC4-208ENST00000576348 JARID2Q92833 1246 aaPredicted RBP20.62■□□□□ 0.89
ERCC4-208ENST00000576348 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
ERCC4-208ENST00000576348 UBN2Q6ZU65 1347 aa20.61■□□□□ 0.89
ERCC4-208ENST00000576348 H7C1W4 665 aa20.61■□□□□ 0.89
ERCC4-208ENST00000576348 HMMRO75330 724 aa20.61■□□□□ 0.89
ERCC4-208ENST00000576348 PCCAP05165 728 aaPredicted RBP20.61■□□□□ 0.89
ERCC4-208ENST00000576348 GTF2E1P29083 439 aaPredicted RBP20.61■□□□□ 0.89
ERCC4-208ENST00000576348 TBC1D9BQ66K14 1250 aa20.61■□□□□ 0.89
ERCC4-208ENST00000576348 RPAP2Q8IXW5 612 aaPredicted RBP20.61■□□□□ 0.89
ERCC4-208ENST00000576348 BCL2L12Q9HB09 334 aa20.61■□□□□ 0.89
ERCC4-208ENST00000576348 PNPLA7Q6ZV29 1317 aa20.6■□□□□ 0.89
ERCC4-208ENST00000576348 HSP90B1P14625 803 aaKnown RBP20.6■□□□□ 0.89
ERCC4-208ENST00000576348 SUCLG2Q96I99 432 aa20.6■□□□□ 0.89
ERCC4-208ENST00000576348 NYXQ9GZU5 481 aa20.6■□□□□ 0.89
ERCC4-208ENST00000576348 SH3TC1Q8TE82 1336 aa20.59■□□□□ 0.89
ERCC4-208ENST00000576348 GYS1P13807 737 aa20.59■□□□□ 0.89
ERCC4-208ENST00000576348 SUSD4Q5VX71 490 aa20.59■□□□□ 0.89
ERCC4-208ENST00000576348 CEP85Q6P2H3 762 aa20.59■□□□□ 0.89
ERCC4-208ENST00000576348 NBPF5PQ86XG9 351 aaPredicted RBP20.59■□□□□ 0.89
ERCC4-208ENST00000576348 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
ERCC4-208ENST00000576348 NLGN1Q8N2Q7 840 aa20.58■□□□□ 0.89
ERCC4-208ENST00000576348 ANKRD44Q8N8A2 993 aa20.58■□□□□ 0.89
ERCC4-208ENST00000576348 N4BP2Q86UW6 1770 aaPredicted RBP20.58■□□□□ 0.89
ERCC4-208ENST00000576348 SCN7AQ01118 1682 aa20.58■□□□□ 0.88
ERCC4-208ENST00000576348 BICC1Q9H694 974 aaKnown RBP20.57■□□□□ 0.88
ERCC4-208ENST00000576348 CARMIL3Q8ND23 1372 aa20.57■□□□□ 0.88
ERCC4-208ENST00000576348 UBR3Q6ZT12 1888 aa20.56■□□□□ 0.88
ERCC4-208ENST00000576348 IRS4O14654 1257 aaPredicted RBP20.56■□□□□ 0.88
ERCC4-208ENST00000576348 CASP7P55210 303 aa20.56■□□□□ 0.88
ERCC4-208ENST00000576348 HDAC1Q13547 482 aaPredicted RBP20.56■□□□□ 0.88
ERCC4-208ENST00000576348 NFIXQ14938 502 aa20.56■□□□□ 0.88
ERCC4-208ENST00000576348 TPTE2Q6XPS3 522 aa20.56■□□□□ 0.88
ERCC4-208ENST00000576348 ILDR2Q71H61 639 aa20.56■□□□□ 0.88
ERCC4-208ENST00000576348 CHMP3Q9Y3E7 222 aa20.56■□□□□ 0.88
ERCC4-208ENST00000576348 CDHR2Q9BYE9 1310 aa20.55■□□□□ 0.88
ERCC4-208ENST00000576348 BCORQ6W2J9 1755 aa20.55■□□□□ 0.88
ERCC4-208ENST00000576348 NTSR2O95665 410 aa20.55■□□□□ 0.88
ERCC4-208ENST00000576348 ATP8B2P98198 1209 aa20.55■□□□□ 0.88
ERCC4-208ENST00000576348 CENPQQ7L2Z9 268 aaPredicted RBP20.55■□□□□ 0.88
ERCC4-208ENST00000576348 SRGAP3O43295 1099 aa20.54■□□□□ 0.88
ERCC4-208ENST00000576348 MSL1Q68DK7 614 aa20.53■□□□□ 0.88
ERCC4-208ENST00000576348 NUTM1Q86Y26 1132 aa20.53■□□□□ 0.88
ERCC4-208ENST00000576348 CNBD1Q8NA66 436 aa20.53■□□□□ 0.88
ERCC4-208ENST00000576348 AFDNP55196 1824 aaKnown RBP20.53■□□□□ 0.88
ERCC4-208ENST00000576348 PDE8AO60658 829 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 IGHDP01880 384 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 HCLS1P14317 486 aaPredicted RBP20.52■□□□□ 0.88
ERCC4-208ENST00000576348 ERFEQ4G0M1 354 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 EPHA10Q5JZY3 1008 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 LMBR1LQ6UX01 489 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 ZBTB47Q9UFB7 747 aaPredicted RBP20.52■□□□□ 0.88
ERCC4-208ENST00000576348 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 C4AP0C0L4 1744 aa20.52■□□□□ 0.88
ERCC4-208ENST00000576348 ST5P78524 1137 aa20.51■□□□□ 0.87
ERCC4-208ENST00000576348 SIRT2Q8IXJ6 389 aa20.51■□□□□ 0.87
ERCC4-208ENST00000576348 SYNE4Q8N205 404 aa20.51■□□□□ 0.87
ERCC4-208ENST00000576348 KAZALD1Q96I82 304 aa20.51■□□□□ 0.87
ERCC4-208ENST00000576348 PLA2G12BQ9BX93 195 aa20.51■□□□□ 0.87
ERCC4-208ENST00000576348 NUP98P52948 1817 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 ANKRD36CQ5JPF3 1778 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 PNMA6EA0A0J9YXQ4 647 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 SERPINB2P05120 415 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 TM4SF1P30408 202 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 FOXO4P98177 505 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 MTX1Q13505 466 aa20.5■□□□□ 0.87
ERCC4-208ENST00000576348 MMP10P09238 476 aa20.49■□□□□ 0.87
ERCC4-208ENST00000576348 CTSWP56202 376 aa20.49■□□□□ 0.87
ERCC4-208ENST00000576348 OS9Q13438 667 aaPredicted RBP20.49■□□□□ 0.87
ERCC4-208ENST00000576348 RABL6Q3YEC7 729 aaPredicted RBP20.49■□□□□ 0.87
ERCC4-208ENST00000576348 TAF7LQ5H9L4 462 aa20.49■□□□□ 0.87
ERCC4-208ENST00000576348 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
ERCC4-208ENST00000576348 GCC1Q96CN9 775 aa20.49■□□□□ 0.87
ERCC4-208ENST00000576348 DDR1Q08345 913 aa20.48■□□□□ 0.87
ERCC4-208ENST00000576348 POLA2Q14181 598 aa20.48■□□□□ 0.87
ERCC4-208ENST00000576348 CCDC57Q2TAC2 916 aa20.48■□□□□ 0.87
ERCC4-208ENST00000576348 SSH3Q8TE77 659 aa20.48■□□□□ 0.87
ERCC4-208ENST00000576348 CCDC85AQ96PX6 553 aaPredicted RBP20.48■□□□□ 0.87
ERCC4-208ENST00000576348 POLRMTO00411 1230 aaKnown RBP20.47■□□□□ 0.87
ERCC4-208ENST00000576348 R3HDM1Q15032 1099 aaKnown RBP20.47■□□□□ 0.87
ERCC4-208ENST00000576348 CCDC152Q4G0S7 254 aa20.47■□□□□ 0.87
ERCC4-208ENST00000576348 KDM2BQ8NHM5 1336 aa20.47■□□□□ 0.87
ERCC4-208ENST00000576348 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
ERCC4-208ENST00000576348 IFIT5Q13325 482 aaKnown RBP20.46■□□□□ 0.87
ERCC4-208ENST00000576348 HSP90AB4PQ58FF6 505 aa20.46■□□□□ 0.87
ERCC4-208ENST00000576348 CCDC24Q8N4L8 307 aa20.46■□□□□ 0.87
ERCC4-208ENST00000576348 NLRP3Q96P20 1036 aa20.46■□□□□ 0.87
ERCC4-208ENST00000576348 APBB1O00213 710 aa20.45■□□□□ 0.86
ERCC4-208ENST00000576348 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.86
ERCC4-208ENST00000576348 FAM161AQ3B820 660 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms