RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CWF19L2Q2TBE0 894 aaKnown RBP10.14□□□□□ -0.79
CCDC40-215ENST00000576033 ANKRD13DQ6ZTN6 518 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 NLRP10Q86W26 655 aa10.14□□□□□ -0.79
CCDC40-215ENST00000576033 NBPF5PQ86XG9 351 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-215ENST00000576033 BCAR3O75815 825 aa10.13□□□□□ -0.79
CCDC40-215ENST00000576033 HCLS1P14317 486 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-215ENST00000576033 FKBP5Q13451 457 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-215ENST00000576033 CLEC4GQ6UXB4 293 aa10.13□□□□□ -0.79
CCDC40-215ENST00000576033 ISCA1Q9BUE6 129 aa10.13□□□□□ -0.79
CCDC40-215ENST00000576033 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
CCDC40-215ENST00000576033 MYH3P11055 1940 aa10.13□□□□□ -0.79
CCDC40-215ENST00000576033 RARSP54136 660 aaKnown RBP10.12□□□□□ -0.79
CCDC40-215ENST00000576033 TCIRG1Q13488 830 aa10.12□□□□□ -0.79
CCDC40-215ENST00000576033 OLFM4Q6UX06 510 aa10.12□□□□□ -0.79
CCDC40-215ENST00000576033 C2CD5Q86YS7 1000 aa10.12□□□□□ -0.79
CCDC40-215ENST00000576033 CD2APQ9Y5K6 639 aa10.12□□□□□ -0.79
CCDC40-215ENST00000576033 IBTKQ9P2D0 1353 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-215ENST00000576033 NPHP1O15259 732 aa10.11□□□□□ -0.79
CCDC40-215ENST00000576033 KSR2Q6VAB6 950 aa10.11□□□□□ -0.79
CCDC40-215ENST00000576033 FAM89AQ96GI7 184 aa10.11□□□□□ -0.79
CCDC40-215ENST00000576033 METTL22Q9BUU2 404 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-215ENST00000576033 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-215ENST00000576033 NEURL1BA8MQ27 555 aa10.1□□□□□ -0.79
CCDC40-215ENST00000576033 ST5P78524 1137 aa10.1□□□□□ -0.79
CCDC40-215ENST00000576033 DNAAF4Q8WXU2 420 aa10.1□□□□□ -0.79
CCDC40-215ENST00000576033 CCDC85AQ96PX6 553 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-215ENST00000576033 TRMT112Q9UI30 125 aaKnown RBP10.1□□□□□ -0.79
CCDC40-215ENST00000576033 NOB1Q9ULX3 412 aaKnown RBP10.1□□□□□ -0.79
CCDC40-215ENST00000576033 A0A1B0GUL6 1792 aa10.1□□□□□ -0.79
CCDC40-215ENST00000576033 LRRC37AA6NMS7 1700 aa10.1□□□□□ -0.79
CCDC40-215ENST00000576033 SLC4A10Q6U841 1118 aa10.09□□□□□ -0.79
CCDC40-215ENST00000576033 PIAS4Q8N2W9 510 aaPredicted RBP10.09□□□□□ -0.79
CCDC40-215ENST00000576033 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
CCDC40-215ENST00000576033 BCS1LQ9Y276 419 aa10.09□□□□□ -0.79
CCDC40-215ENST00000576033 TIAM2Q8IVF5 1701 aa10.09□□□□□ -0.79
CCDC40-215ENST00000576033 FER1L6Q2WGJ9 1857 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 CCDC88AQ3V6T2 1871 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 RIC1Q4ADV7 1423 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 RGL2O15211 777 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 DDX58O95786 925 aaKnown RBP10.08□□□□□ -0.8
CCDC40-215ENST00000576033 GTF2E1P29083 439 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-215ENST00000576033 RASSF7Q02833 373 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 PARP10Q53GL7 1025 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 HSP90AB3PQ58FF7 597 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 BEND3Q5T5X7 828 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC40-215ENST00000576033 BRIP1Q9BX63 1249 aa10.08□□□□□ -0.8
CCDC40-215ENST00000576033 CWC25Q9NXE8 425 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-215ENST00000576033 SBF1O95248 1867 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 DUOX1Q9NRD9 1551 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 SRGNP10124 158 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 PRELPP51888 382 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 TGFB2P61812 414 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 GPR162Q16538 588 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 ALDH1L2Q3SY69 923 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 TPTE2Q6XPS3 522 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 PPP1R42Q7Z4L9 355 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 FRAT1Q92837 279 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-215ENST00000576033 NYXQ9GZU5 481 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 LTBP1Q14766 1721 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 SNED1Q8TER0 1413 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 SH3TC1Q8TE82 1336 aa10.07□□□□□ -0.8
CCDC40-215ENST00000576033 COL4A5P29400 1685 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 CHD4Q14839 1912 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 H0YIN7 160 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 IRS4O14654 1257 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-215ENST00000576033 PDE6BP35913 854 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 CASP7P55210 303 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 GCKRQ14397 625 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 CRY2Q49AN0 593 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 EPHA10Q5JZY3 1008 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 PRPF40BQ6NWY9 871 aaKnown RBP10.06□□□□□ -0.8
CCDC40-215ENST00000576033 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 ABCC4O15439 1325 aa10.06□□□□□ -0.8
CCDC40-215ENST00000576033 KLRG2A4D1S0 409 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-215ENST00000576033 PLIN1O60240 522 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 PCCAP05165 728 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-215ENST00000576033 RLBP1P12271 317 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 TRIM27P14373 513 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
CCDC40-215ENST00000576033 ZBTB38Q8NAP3 1195 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-215ENST00000576033 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 SEC31BQ9NQW1 1179 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 PIM2Q9P1W9 311 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 PTPRCP08575 1304 aa10.05□□□□□ -0.8
CCDC40-215ENST00000576033 C21orf2O43822 256 aa10.04□□□□□ -0.8
CCDC40-215ENST00000576033 CT47B1P0C2W7 299 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-215ENST00000576033 NBPF7P0C2Y1 421 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-215ENST00000576033 NEXNQ0ZGT2 675 aa10.04□□□□□ -0.8
CCDC40-215ENST00000576033 DALRD3Q5D0E6 543 aaKnown RBP10.04□□□□□ -0.8
CCDC40-215ENST00000576033 CELF1Q92879 486 aaKnown RBP10.04□□□□□ -0.8
CCDC40-215ENST00000576033 MASTLQ96GX5 879 aa10.04□□□□□ -0.8
CCDC40-215ENST00000576033 KAZALD1Q96I82 304 aa10.04□□□□□ -0.8
CCDC40-215ENST00000576033 SUCLG2Q96I99 432 aa10.04□□□□□ -0.8
CCDC40-215ENST00000576033 RNF123Q5XPI4 1314 aa10.04□□□□□ -0.8
CCDC40-215ENST00000576033 H7C1W4 665 aa10.03□□□□□ -0.8
CCDC40-215ENST00000576033 NFKBIEO00221 500 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms