RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 FAM177BA6PVY3 158 aa18.42■□□□□ 0.54
CDC27-217ENST00000575483 FKBP4Q02790 459 aaKnown RBP eCLIP18.42■□□□□ 0.54
CDC27-217ENST00000575483 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
CDC27-217ENST00000575483 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
CDC27-217ENST00000575483 NUTM1Q86Y26 1132 aa18.4■□□□□ 0.54
CDC27-217ENST00000575483 ZNF277Q9NRM2 450 aaPredicted RBP18.4■□□□□ 0.54
CDC27-217ENST00000575483 NEFMP07197 916 aa18.39■□□□□ 0.53
CDC27-217ENST00000575483 PDIA6Q15084 440 aa18.39■□□□□ 0.53
CDC27-217ENST00000575483 CHADLQ6NUI6 762 aa18.39■□□□□ 0.53
CDC27-217ENST00000575483 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
CDC27-217ENST00000575483 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
CDC27-217ENST00000575483 ERBB4Q15303 1308 aa18.39■□□□□ 0.53
CDC27-217ENST00000575483 LAMB2P55268 1798 aa18.38■□□□□ 0.53
CDC27-217ENST00000575483 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
CDC27-217ENST00000575483 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
CDC27-217ENST00000575483 SLC51AQ86UW1 340 aa18.38■□□□□ 0.53
CDC27-217ENST00000575483 ZNF34Q8IZ26 560 aa18.38■□□□□ 0.53
CDC27-217ENST00000575483 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
CDC27-217ENST00000575483 LTBP1Q14766 1721 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 NTSR2O95665 410 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 MYL6BP14649 208 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 ALDH1B1P30837 517 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 CHRDL2Q6WN34 429 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 ZBTB3Q9H5J0 574 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
CDC27-217ENST00000575483 PASKQ96RG2 1323 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 MAPK8IP3Q9UPT6 1336 aa18.37■□□□□ 0.53
CDC27-217ENST00000575483 FZD9O00144 591 aa18.36■□□□□ 0.53
CDC27-217ENST00000575483 GPTP24298 496 aa18.36■□□□□ 0.53
CDC27-217ENST00000575483 GIGYF2Q6Y7W6 1299 aaKnown RBP18.36■□□□□ 0.53
CDC27-217ENST00000575483 KIF6Q6ZMV9 814 aa18.36■□□□□ 0.53
CDC27-217ENST00000575483 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
CDC27-217ENST00000575483 PSMD1Q99460 953 aa18.36■□□□□ 0.53
CDC27-217ENST00000575483 PNNQ9H307 717 aaKnown RBP18.36■□□□□ 0.53
CDC27-217ENST00000575483 IQCA1LA6NCM1 817 aa18.35■□□□□ 0.53
CDC27-217ENST00000575483 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
CDC27-217ENST00000575483 PROSER3Q2NL68 480 aa18.35■□□□□ 0.53
CDC27-217ENST00000575483 GTF2E1P29083 439 aaPredicted RBP18.34■□□□□ 0.53
CDC27-217ENST00000575483 RALBP1Q15311 655 aa18.34■□□□□ 0.53
CDC27-217ENST00000575483 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
CDC27-217ENST00000575483 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
CDC27-217ENST00000575483 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
CDC27-217ENST00000575483 BABAM1Q9NWV8 329 aa18.34■□□□□ 0.53
CDC27-217ENST00000575483 TSPYL4Q9UJ04 414 aa18.34■□□□□ 0.53
CDC27-217ENST00000575483 ITGBL1O95965 494 aaPredicted RBP18.33■□□□□ 0.52
CDC27-217ENST00000575483 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
CDC27-217ENST00000575483 RIPK4P57078 832 aa18.33■□□□□ 0.52
CDC27-217ENST00000575483 HSPA1AP0DMV8 641 aaKnown RBP18.32■□□□□ 0.52
CDC27-217ENST00000575483 HSPA1BP0DMV9 641 aaKnown RBP18.32■□□□□ 0.52
CDC27-217ENST00000575483 CC2D2BQ6DHV5 1058 aa18.32■□□□□ 0.52
CDC27-217ENST00000575483 CRAMP1Q96RY5 1269 aa18.32■□□□□ 0.52
CDC27-217ENST00000575483 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
CDC27-217ENST00000575483 ANXA1P04083 346 aa18.31■□□□□ 0.52
CDC27-217ENST00000575483 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
CDC27-217ENST00000575483 SLC10A5Q5PT55 438 aa18.3■□□□□ 0.52
CDC27-217ENST00000575483 GPC2Q8N158 579 aa18.3■□□□□ 0.52
CDC27-217ENST00000575483 RPGRQ92834 1020 aaKnown RBP18.3■□□□□ 0.52
CDC27-217ENST00000575483 HACL1Q9UJ83 578 aa18.3■□□□□ 0.52
CDC27-217ENST00000575483 TAF1P21675 1872 aa18.3■□□□□ 0.52
CDC27-217ENST00000575483 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
CDC27-217ENST00000575483 PRR29P0C7W0 189 aa18.29■□□□□ 0.52
CDC27-217ENST00000575483 EPHX2P34913 555 aa18.29■□□□□ 0.52
CDC27-217ENST00000575483 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
CDC27-217ENST00000575483 DDX60Q8IY21 1712 aaKnown RBP18.29■□□□□ 0.52
CDC27-217ENST00000575483 EIF2S2P20042 333 aaKnown RBP18.28■□□□□ 0.52
CDC27-217ENST00000575483 KRT24Q2M2I5 525 aa18.28■□□□□ 0.52
CDC27-217ENST00000575483 MKRN1Q9UHC7 482 aaKnown RBP18.28■□□□□ 0.52
CDC27-217ENST00000575483 TRIM35Q9UPQ4 493 aa18.28■□□□□ 0.52
CDC27-217ENST00000575483 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
CDC27-217ENST00000575483 MYBBP1AQ9BQG0 1328 aaKnown RBP18.27■□□□□ 0.52
CDC27-217ENST00000575483 CHL1O00533 1208 aa18.27■□□□□ 0.52
CDC27-217ENST00000575483 PPEF1O14829 653 aaPredicted RBP18.27■□□□□ 0.52
CDC27-217ENST00000575483 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
CDC27-217ENST00000575483 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
CDC27-217ENST00000575483 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.52
CDC27-217ENST00000575483 RBM17Q96I25 401 aaKnown RBP18.27■□□□□ 0.52
CDC27-217ENST00000575483 ABCC4O15439 1325 aa18.26■□□□□ 0.51
CDC27-217ENST00000575483 SCNN1DP51172 638 aa18.26■□□□□ 0.51
CDC27-217ENST00000575483 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
CDC27-217ENST00000575483 UTP14AQ9BVJ6 771 aaKnown RBP18.26■□□□□ 0.51
CDC27-217ENST00000575483 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
CDC27-217ENST00000575483 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
CDC27-217ENST00000575483 COPS6Q7L5N1 327 aa18.25■□□□□ 0.51
CDC27-217ENST00000575483 PNMA8AQ86V59 439 aaPredicted RBP18.25■□□□□ 0.51
CDC27-217ENST00000575483 NLRP10Q86W26 655 aa18.25■□□□□ 0.51
CDC27-217ENST00000575483 XAGE3Q8WTP9 111 aa18.25■□□□□ 0.51
CDC27-217ENST00000575483 JDP2Q8WYK2 163 aa18.25■□□□□ 0.51
CDC27-217ENST00000575483 ATP6V0A2Q9Y487 856 aa18.25■□□□□ 0.51
CDC27-217ENST00000575483 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
CDC27-217ENST00000575483 MAP1SQ66K74 1059 aaPredicted RBP18.24■□□□□ 0.51
CDC27-217ENST00000575483 NLRP3Q96P20 1036 aa18.24■□□□□ 0.51
CDC27-217ENST00000575483 RTFDC1Q9BY42 306 aaPredicted RBP18.24■□□□□ 0.51
CDC27-217ENST00000575483 DDX21Q9NR30 783 aaKnown RBP eCLIP18.24■□□□□ 0.51
CDC27-217ENST00000575483 COL4A1P02462 1669 aa18.24■□□□□ 0.51
CDC27-217ENST00000575483 TRPM7Q96QT4 1865 aa18.24■□□□□ 0.51
CDC27-217ENST00000575483 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
CDC27-217ENST00000575483 TMEM88BA6NKF7 163 aa18.23■□□□□ 0.51
CDC27-217ENST00000575483 LARGE2Q8N3Y3 721 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms