RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
SMG6-218ENST00000575454 CCDC85CA6NKD9 419 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 EPS15P42566 896 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 RGS19P49795 217 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 SCNN1DP51172 638 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 KIF6Q6ZMV9 814 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 NIM1KQ8IY84 436 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
SMG6-218ENST00000575454 CRAMP1Q96RY5 1269 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 ADARB2Q9NS39 739 aaKnown RBP11.97□□□□□ -0.49
SMG6-218ENST00000575454 TLL2Q9Y6L7 1015 aa11.97□□□□□ -0.49
SMG6-218ENST00000575454 COL3A1P02461 1466 aaPredicted RBP11.96□□□□□ -0.49
SMG6-218ENST00000575454 NEFMP07197 916 aa11.96□□□□□ -0.49
SMG6-218ENST00000575454 GRM1Q13255 1194 aa11.96□□□□□ -0.49
SMG6-218ENST00000575454 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
SMG6-218ENST00000575454 CYP4F22Q6NT55 531 aa11.96□□□□□ -0.49
SMG6-218ENST00000575454 SUPT20HQ8NEM7 779 aa11.96□□□□□ -0.49
SMG6-218ENST00000575454 HHIPL1Q96JK4 782 aa11.96□□□□□ -0.49
SMG6-218ENST00000575454 SCN7AQ01118 1682 aa11.96□□□□□ -0.5
SMG6-218ENST00000575454 MAP3K15Q6ZN16 1313 aa11.95□□□□□ -0.5
SMG6-218ENST00000575454 PPEF1O14829 653 aaPredicted RBP11.95□□□□□ -0.5
SMG6-218ENST00000575454 CST9Q5W186 159 aa11.95□□□□□ -0.5
SMG6-218ENST00000575454 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
SMG6-218ENST00000575454 PDE4DIPQ5VU43 2346 aa11.95□□□□□ -0.5
SMG6-218ENST00000575454 UBR2Q8IWV8 1755 aa11.95□□□□□ -0.5
SMG6-218ENST00000575454 IBTKQ9P2D0 1353 aaPredicted RBP11.94□□□□□ -0.5
SMG6-218ENST00000575454 PPIP5K2O43314 1243 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 PARP10Q53GL7 1025 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 PPP1R42Q7Z4L9 355 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 SAPCD2Q86UD0 394 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 NGEFQ8N5V2 710 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 ZC3H15Q8WU90 426 aaKnown RBP11.94□□□□□ -0.5
SMG6-218ENST00000575454 NLRP3Q96P20 1036 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 GPRC5DQ9NZD1 345 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 ZNRF3Q9ULT6 936 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
SMG6-218ENST00000575454 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
SMG6-218ENST00000575454 TRAF5O00463 557 aa11.93□□□□□ -0.5
SMG6-218ENST00000575454 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
SMG6-218ENST00000575454 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
SMG6-218ENST00000575454 DCTN1Q14203 1278 aa11.93□□□□□ -0.5
SMG6-218ENST00000575454 RRP7AQ9Y3A4 280 aaKnown RBP11.93□□□□□ -0.5
SMG6-218ENST00000575454 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
SMG6-218ENST00000575454 SLX4Q8IY92 1834 aa11.93□□□□□ -0.5
SMG6-218ENST00000575454 ABCC12Q96J65 1359 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 CDHR2Q9BYE9 1310 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
SMG6-218ENST00000575454 TCERG1O14776 1098 aaKnown RBP11.92□□□□□ -0.5
SMG6-218ENST00000575454 BBOX1O75936 387 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 GPTP24298 496 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 TNIP1Q15025 636 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 SUSD4Q5VX71 490 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 PGAP2Q9UHJ9 254 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 SCN4AP35499 1836 aa11.92□□□□□ -0.5
SMG6-218ENST00000575454 ANKRD31Q8N7Z5 1873 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 ERBB4Q15303 1308 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMG6-218ENST00000575454 CXCL9Q07325 125 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 AOC3Q16853 763 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 SLC10A5Q5PT55 438 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
SMG6-218ENST00000575454 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 UTP14AQ9BVJ6 771 aaKnown RBP11.91□□□□□ -0.5
SMG6-218ENST00000575454 BCL2L13Q9BXK5 485 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 RTFDC1Q9BY42 306 aaPredicted RBP11.91□□□□□ -0.5
SMG6-218ENST00000575454 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
SMG6-218ENST00000575454 UBN2Q6ZU65 1347 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 AOC2O75106 756 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 NTSR2O95665 410 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 MYL6BP14649 208 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 GMPSP49915 693 aaPredicted RBP11.9□□□□□ -0.5
SMG6-218ENST00000575454 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
SMG6-218ENST00000575454 NOGQ13253 232 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 CIAPIN1Q6FI81 312 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 DPP8Q6V1X1 898 aaPredicted RBP11.9□□□□□ -0.5
SMG6-218ENST00000575454 TTLL7Q6ZT98 887 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 CFAP44Q96MT7 982 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 MCOLN1Q9GZU1 580 aa11.9□□□□□ -0.5
SMG6-218ENST00000575454 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
SMG6-218ENST00000575454 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
SMG6-218ENST00000575454 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
SMG6-218ENST00000575454 SP8Q8IXZ3 490 aa11.89□□□□□ -0.51
SMG6-218ENST00000575454 PNNQ9H307 717 aaKnown RBP11.89□□□□□ -0.51
SMG6-218ENST00000575454 TSKSQ9UJT2 592 aa11.89□□□□□ -0.51
SMG6-218ENST00000575454 ADAMTSL1Q8N6G6 1762 aa11.88□□□□□ -0.51
SMG6-218ENST00000575454 H7C1D1 291 aa11.88□□□□□ -0.51
SMG6-218ENST00000575454 HSP90AB3PQ58FF7 597 aa11.88□□□□□ -0.51
SMG6-218ENST00000575454 TMC4Q7Z404 712 aa11.88□□□□□ -0.51
SMG6-218ENST00000575454 MPNDQ8N594 471 aa11.88□□□□□ -0.51
SMG6-218ENST00000575454 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
SMG6-218ENST00000575454 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
SMG6-218ENST00000575454 DGKZQ13574 1117 aa11.87□□□□□ -0.51
SMG6-218ENST00000575454 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
SMG6-218ENST00000575454 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
SMG6-218ENST00000575454 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
SMG6-218ENST00000575454 CNOT7Q9UIV1 285 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms