RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
LITAF-217ENST00000575426 GRIN3BO60391 1043 aa19.41■□□□□ 0.7
LITAF-217ENST00000575426 ERFEQ4G0M1 354 aa19.41■□□□□ 0.7
LITAF-217ENST00000575426 ISCA1Q9BUE6 129 aa19.41■□□□□ 0.7
LITAF-217ENST00000575426 METTL22Q9BUU2 404 aaPredicted RBP19.41■□□□□ 0.7
LITAF-217ENST00000575426 TRMT112Q9UI30 125 aaKnown RBP19.41■□□□□ 0.7
LITAF-217ENST00000575426 NTSR2O95665 410 aa19.4■□□□□ 0.7
LITAF-217ENST00000575426 KCNA3P22001 575 aa19.4■□□□□ 0.7
LITAF-217ENST00000575426 ZNF622Q969S3 477 aaKnown RBP eCLIP19.4■□□□□ 0.7
LITAF-217ENST00000575426 BCS1LQ9Y276 419 aa19.4■□□□□ 0.7
LITAF-217ENST00000575426 RNF123Q5XPI4 1314 aa19.4■□□□□ 0.7
LITAF-217ENST00000575426 ARFGEF1Q9Y6D6 1849 aa19.39■□□□□ 0.7
LITAF-217ENST00000575426 CHD4Q14839 1912 aa19.39■□□□□ 0.7
LITAF-217ENST00000575426 TRIM28Q13263 835 aaKnown RBP19.39■□□□□ 0.69
LITAF-217ENST00000575426 ADCY9O60503 1353 aa19.38■□□□□ 0.69
LITAF-217ENST00000575426 ALDH1L2Q3SY69 923 aa19.38■□□□□ 0.69
LITAF-217ENST00000575426 DALRD3Q5D0E6 543 aaKnown RBP19.38■□□□□ 0.69
LITAF-217ENST00000575426 CCDC191Q8NCU4 936 aa19.38■□□□□ 0.69
LITAF-217ENST00000575426 SH3TC1Q8TE82 1336 aa19.38■□□□□ 0.69
LITAF-217ENST00000575426 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
LITAF-217ENST00000575426 YBX3P16989 372 aaKnown RBP eCLIP19.37■□□□□ 0.69
LITAF-217ENST00000575426 MRPL50Q8N5N7 158 aaKnown RBP19.37■□□□□ 0.69
LITAF-217ENST00000575426 TTLL6Q8N841 843 aa19.37■□□□□ 0.69
LITAF-217ENST00000575426 DNAAF4Q8WXU2 420 aa19.37■□□□□ 0.69
LITAF-217ENST00000575426 MASTLQ96GX5 879 aa19.37■□□□□ 0.69
LITAF-217ENST00000575426 NLRP3Q96P20 1036 aa19.37■□□□□ 0.69
LITAF-217ENST00000575426 CWC25Q9NXE8 425 aaPredicted RBP19.37■□□□□ 0.69
LITAF-217ENST00000575426 SRGNP10124 158 aa19.36■□□□□ 0.69
LITAF-217ENST00000575426 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
LITAF-217ENST00000575426 CNKSR1Q969H4 720 aa19.36■□□□□ 0.69
LITAF-217ENST00000575426 SMC4Q9NTJ3 1288 aa19.36■□□□□ 0.69
LITAF-217ENST00000575426 ABCC12Q96J65 1359 aa19.35■□□□□ 0.69
LITAF-217ENST00000575426 HSP90B1P14625 803 aaKnown RBP19.35■□□□□ 0.69
LITAF-217ENST00000575426 NPR1P16066 1061 aa19.35■□□□□ 0.69
LITAF-217ENST00000575426 SLC10A5Q5PT55 438 aa19.35■□□□□ 0.69
LITAF-217ENST00000575426 STYK1Q6J9G0 422 aa19.35■□□□□ 0.69
LITAF-217ENST00000575426 RPGRQ92834 1020 aaKnown RBP19.35■□□□□ 0.69
LITAF-217ENST00000575426 BCL2L13Q9BXK5 485 aa19.35■□□□□ 0.69
LITAF-217ENST00000575426 RIC1Q4ADV7 1423 aa19.34■□□□□ 0.69
LITAF-217ENST00000575426 LAMB2P55268 1798 aa19.34■□□□□ 0.69
LITAF-217ENST00000575426 KLRG2A4D1S0 409 aaPredicted RBP19.34■□□□□ 0.69
LITAF-217ENST00000575426 ZBTB38Q8NAP3 1195 aaPredicted RBP19.34■□□□□ 0.69
LITAF-217ENST00000575426 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
LITAF-217ENST00000575426 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.69
LITAF-217ENST00000575426 PTPRCP08575 1304 aa19.33■□□□□ 0.69
LITAF-217ENST00000575426 HCLS1P14317 486 aaPredicted RBP19.33■□□□□ 0.68
LITAF-217ENST00000575426 ALDH1B1P30837 517 aa19.33■□□□□ 0.68
LITAF-217ENST00000575426 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.68
LITAF-217ENST00000575426 DDX60Q8IY21 1712 aaKnown RBP19.33■□□□□ 0.68
LITAF-217ENST00000575426 F6X3S4 739 aa19.32■□□□□ 0.68
LITAF-217ENST00000575426 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
LITAF-217ENST00000575426 SLC4A10Q6U841 1118 aa19.32■□□□□ 0.68
LITAF-217ENST00000575426 SYNE4Q8N205 404 aa19.32■□□□□ 0.68
LITAF-217ENST00000575426 LINS1Q8NG48 757 aa19.32■□□□□ 0.68
LITAF-217ENST00000575426 SLX4Q8IY92 1834 aa19.32■□□□□ 0.68
LITAF-217ENST00000575426 MYH3P11055 1940 aa19.31■□□□□ 0.68
LITAF-217ENST00000575426 NEURL1BA8MQ27 555 aa19.31■□□□□ 0.68
LITAF-217ENST00000575426 IRS4O14654 1257 aaPredicted RBP19.31■□□□□ 0.68
LITAF-217ENST00000575426 PCCAP05165 728 aaPredicted RBP19.31■□□□□ 0.68
LITAF-217ENST00000575426 IGKV5-2P06315 115 aa19.31■□□□□ 0.68
LITAF-217ENST00000575426 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
LITAF-217ENST00000575426 ARHGAP27Q6ZUM4 889 aa19.31■□□□□ 0.68
LITAF-217ENST00000575426 RBM17Q96I25 401 aaKnown RBP19.31■□□□□ 0.68
LITAF-217ENST00000575426 CRY2Q49AN0 593 aa19.3■□□□□ 0.68
LITAF-217ENST00000575426 ZNF219Q9P2Y4 722 aaPredicted RBP19.29■□□□□ 0.68
LITAF-217ENST00000575426 GCKRQ14397 625 aa19.28■□□□□ 0.68
LITAF-217ENST00000575426 PRPF40BQ6NWY9 871 aaKnown RBP19.28■□□□□ 0.68
LITAF-217ENST00000575426 JARID2Q92833 1246 aaPredicted RBP19.28■□□□□ 0.68
LITAF-217ENST00000575426 CCDC88AQ3V6T2 1871 aa19.28■□□□□ 0.68
LITAF-217ENST00000575426 C21orf2O43822 256 aa19.27■□□□□ 0.68
LITAF-217ENST00000575426 HOXA10P31260 410 aaPredicted RBP19.27■□□□□ 0.68
LITAF-217ENST00000575426 BRPF1P55201 1214 aaPredicted RBP19.27■□□□□ 0.68
LITAF-217ENST00000575426 BEND3Q5T5X7 828 aa19.27■□□□□ 0.68
LITAF-217ENST00000575426 SOGA3Q5TF21 947 aa19.27■□□□□ 0.68
LITAF-217ENST00000575426 DDX46Q7L014 1031 aaKnown RBP19.27■□□□□ 0.68
LITAF-217ENST00000575426 CRAMP1Q96RY5 1269 aa19.27■□□□□ 0.68
LITAF-217ENST00000575426 SRCIN1Q9C0H9 1055 aa19.27■□□□□ 0.68
LITAF-217ENST00000575426 NOB1Q9ULX3 412 aaKnown RBP19.27■□□□□ 0.68
LITAF-217ENST00000575426 KIF16BQ96L93 1317 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 CDHR2Q9BYE9 1310 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 TAF1P21675 1872 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 H7C1W4 665 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 PDE8AO60658 829 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 C3orf67Q6ZVT6 689 aa19.26■□□□□ 0.67
LITAF-217ENST00000575426 API5Q9BZZ5 524 aaKnown RBP19.26■□□□□ 0.67
LITAF-217ENST00000575426 TMX4Q9H1E5 349 aaPredicted RBP19.26■□□□□ 0.67
LITAF-217ENST00000575426 IPO8O15397 1037 aaKnown RBP19.25■□□□□ 0.67
LITAF-217ENST00000575426 SF3B3Q15393 1217 aaKnown RBP19.25■□□□□ 0.67
LITAF-217ENST00000575426 UBE3BQ7Z3V4 1068 aa19.25■□□□□ 0.67
LITAF-217ENST00000575426 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
LITAF-217ENST00000575426 C9orf78Q9NZ63 289 aaPredicted RBP19.25■□□□□ 0.67
LITAF-217ENST00000575426 SBF1O95248 1867 aa19.24■□□□□ 0.67
LITAF-217ENST00000575426 FER1L6Q2WGJ9 1857 aa19.24■□□□□ 0.67
LITAF-217ENST00000575426 CCDC152Q4G0S7 254 aa19.23■□□□□ 0.67
LITAF-217ENST00000575426 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
LITAF-217ENST00000575426 FRAT1Q92837 279 aaPredicted RBP19.23■□□□□ 0.67
LITAF-217ENST00000575426 BCAR3O75815 825 aa19.22■□□□□ 0.67
LITAF-217ENST00000575426 YY1P25490 414 aa19.22■□□□□ 0.67
LITAF-217ENST00000575426 CCDC93Q567U6 631 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms