RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RIMBP3CA6NJZ7 1639 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 RIMBP3BA6NNM3 1639 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 PIK3C2BO00750 1634 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 RIMBP3Q9UFD9 1639 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 ALKQ9UM73 1620 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 NEO1Q92859 1461 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 KIF20BQ96Q89 1820 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 RIMS1Q86UR5 1692 aaKnown RBP10.14□□□□□ -0.79
RPAIN-215ENST00000575112 PTGS1P23219 599 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 GJB2P29033 226 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 MAP7D2Q96T17 732 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 ECHDC1Q9NTX5 307 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 RNMTO43148 476 aaKnown RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 NMIQ13287 307 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 LMBR1LQ6UX01 489 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 LUZP1Q86V48 1076 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 IP6K1Q92551 441 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 MAP3K5Q99683 1374 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 MCM5P33992 734 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 GNL2Q13823 731 aaKnown RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 CREBRFQ8IUR6 639 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 KIF3AQ9Y496 699 aa10.13□□□□□ -0.79
RPAIN-215ENST00000575112 V9GYY5 206 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 GLRX3O76003 335 aaKnown RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 MAPK8IP2Q13387 824 aaPredicted RBP10.13□□□□□ -0.79
RPAIN-215ENST00000575112 GRM8O00222 908 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 HSP90AB4PQ58FF6 505 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 BLOC1S2Q6QNY1 142 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 HELBQ8NG08 1087 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 SYAP1Q96A49 352 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 C16orf45Q96MC5 204 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 TAF6LQ9Y6J9 622 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 ST3GAL1Q11201 340 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 KCNH5Q8NCM2 988 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 ERCC4Q92889 916 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 PPP6R1Q9UPN7 881 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 IQSEC3Q9UPP2 1182 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 RBM8AQ9Y5S9 174 aaKnown RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 SNX14Q9Y5W7 946 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 TFCP2Q12800 502 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 ARID5BQ14865 1188 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 SLC4A8Q2Y0W8 1093 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 ISM2Q6H9L7 571 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 CCDC144CPQ8IYA2 1237 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 EAF2Q96CJ1 260 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-215ENST00000575112 TTC21AQ8NDW8 1320 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 LMTK2Q8IWU2 1503 aa10.12□□□□□ -0.79
RPAIN-215ENST00000575112 SF3A1Q15459 793 aaKnown RBP10.11□□□□□ -0.79
RPAIN-215ENST00000575112 RRP12Q5JTH9 1297 aaKnown RBP10.11□□□□□ -0.79
RPAIN-215ENST00000575112 ZBTB9Q96C00 473 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 SBNO1A3KN83 1393 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 LIG1P18858 919 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 KIAA1524Q8TCG1 905 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 FUCA2Q9BTY2 467 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-215ENST00000575112 STX6O43752 255 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 CCDC183Q5T5S1 534 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 KSR2Q6VAB6 950 aa10.11□□□□□ -0.79
RPAIN-215ENST00000575112 USP6P35125 1406 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 ZSCAN22P10073 491 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-215ENST00000575112 BICDL1Q6ZP65 573 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 PDCL2Q8N4E4 241 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 DBNDD2Q9BQY9 259 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 CDC42BPGQ6DT37 1551 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 AKAP4Q5JQC9 854 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 LIMCH1Q9UPQ0 1083 aa10.1□□□□□ -0.79
RPAIN-215ENST00000575112 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-215ENST00000575112 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 WDR33Q9C0J8 1336 aaKnown RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 GTF2E1P29083 439 aaPredicted RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 BEND3Q5T5X7 828 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 GIGYF1O75420 1035 aaPredicted RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 RXRAP19793 462 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 HSPA4P34932 840 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 OTUD7BQ6GQQ9 843 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 ZNF790Q6PG37 636 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 LARP1Q6PKG0 1096 aaKnown RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 BRF1Q92994 677 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 ST7Q9NRC1 585 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 SPTLC3Q9NUV7 552 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 IGSF1Q8N6C5 1336 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 IDH1O75874 414 aaKnown RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 F13A1P00488 732 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 HMGN5P82970 282 aaKnown RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 EPHA10Q5JZY3 1008 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 RNF20Q5VTR2 975 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 CCDC186Q7Z3E2 898 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 FAM89AQ96GI7 184 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 INTS4Q96HW7 963 aaKnown RBP10.09□□□□□ -0.79
RPAIN-215ENST00000575112 TTC14Q96N46 770 aa10.09□□□□□ -0.79
RPAIN-215ENST00000575112 USP27XA6NNY8 438 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms