RNA–Protein interactions for RNA: ENST00000575009.5

SRRM2-222, Transcript of serine/arginine repetitive matrix 2, human

TSL 5

Gene SRRM2, Length 1,146 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-222	ENST00000575009	EXOSC9	Q06265	439 aa	Known RBP	33.74	■■■□□ 2.99
SRRM2-222	ENST00000575009	UTP14A	Q9BVJ6	771 aa	Known RBP	33.74	■■■□□ 2.99
SRRM2-222	ENST00000575009	C21orf2	O43822	256 aa		33.73	■■■□□ 2.99
SRRM2-222	ENST00000575009	PRPF40B	Q6NWY9	871 aa	Known RBP	33.73	■■■□□ 2.99
SRRM2-222	ENST00000575009	CNKSR1	Q969H4	720 aa		33.73	■■■□□ 2.99
SRRM2-222	ENST00000575009	RIC1	Q4ADV7	1423 aa		33.72	■■■□□ 2.99
SRRM2-222	ENST00000575009	ATP5J2-PTCD1	G3V325	749 aa		33.72	■■■□□ 2.99
SRRM2-222	ENST00000575009	NPR1	P16066	1061 aa		33.72	■■■□□ 2.99
SRRM2-222	ENST00000575009	C3orf67	Q6ZVT6	689 aa		33.72	■■■□□ 2.99
SRRM2-222	ENST00000575009	SYNE4	Q8N205	404 aa		33.72	■■■□□ 2.99
SRRM2-222	ENST00000575009	LAMB2	P55268	1798 aa		33.71	■■■□□ 2.99
SRRM2-222	ENST00000575009	GOLGA2	Q08379	1002 aa		33.71	■■■□□ 2.99
SRRM2-222	ENST00000575009	CCDC88A	Q3V6T2	1871 aa		33.7	■■■□□ 2.99
SRRM2-222	ENST00000575009	RIC3	Q7Z5B4	369 aa		33.7	■■■□□ 2.99
SRRM2-222	ENST00000575009	MIER1	Q8N108	512 aa		33.7	■■■□□ 2.99
SRRM2-222	ENST00000575009	ISCA1	Q9BUE6	129 aa		33.7	■■■□□ 2.99
SRRM2-222	ENST00000575009	FER1L6	Q2WGJ9	1857 aa		33.69	■■■□□ 2.98
SRRM2-222	ENST00000575009	C9orf131	Q5VYM1	1079 aa		33.69	■■■□□ 2.98
SRRM2-222	ENST00000575009	PRELP	P51888	382 aa		33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	CRY2	Q49AN0	593 aa		33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	G2E3	Q7L622	706 aa		33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	STK31	Q9BXU1	1019 aa		33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	CHMP4A	Q9BY43	222 aa		33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	MYH16	Q9H6N6	1097 aa		33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	TRMT112	Q9UI30	125 aa	Known RBP	33.68	■■■□□ 2.98
SRRM2-222	ENST00000575009	NFKBIE	O00221	500 aa		33.67	■■■□□ 2.98
SRRM2-222	ENST00000575009	VAMP4	O75379	141 aa		33.67	■■■□□ 2.98
SRRM2-222	ENST00000575009	ZNF526	Q8TF50	670 aa	Predicted RBP	33.67	■■■□□ 2.98
SRRM2-222	ENST00000575009	DDX60	Q8IY21	1712 aa	Known RBP	33.65	■■■□□ 2.98
SRRM2-222	ENST00000575009	MYD88	Q99836	296 aa		33.65	■■■□□ 2.98
SRRM2-222	ENST00000575009	RNF181	Q9P0P0	153 aa		33.65	■■■□□ 2.98
SRRM2-222	ENST00000575009	SLC4A2	P04920	1241 aa		33.64	■■■□□ 2.98
SRRM2-222	ENST00000575009	HCLS1	P14317	486 aa	Predicted RBP	33.64	■■■□□ 2.98
SRRM2-222	ENST00000575009	SLC10A5	Q5PT55	438 aa		33.64	■■■□□ 2.98
SRRM2-222	ENST00000575009	OLFM4	Q6UX06	510 aa		33.64	■■■□□ 2.98
SRRM2-222	ENST00000575009	RNF123	Q5XPI4	1314 aa		33.63	■■■□□ 2.97
SRRM2-222	ENST00000575009	RPGR	Q92834	1020 aa	Known RBP	33.63	■■■□□ 2.97
SRRM2-222	ENST00000575009	SH3TC1	Q8TE82	1336 aa		33.62	■■■□□ 2.97
SRRM2-222	ENST00000575009	C7orf43	Q8WVR3	580 aa		33.62	■■■□□ 2.97
SRRM2-222	ENST00000575009	CACNA1F	O60840	1977 aa		33.61	■■■□□ 2.97
SRRM2-222	ENST00000575009	RTL5	Q5HYW3	569 aa	Predicted RBP	33.61	■■■□□ 2.97
SRRM2-222	ENST00000575009	NLRP3	Q96P20	1036 aa		33.61	■■■□□ 2.97
SRRM2-222	ENST00000575009	MAP3K2	Q9Y2U5	619 aa		33.61	■■■□□ 2.97
SRRM2-222	ENST00000575009	DDX58	O95786	925 aa	Known RBP	33.6	■■■□□ 2.97
SRRM2-222	ENST00000575009	ALDH1B1	P30837	517 aa		33.6	■■■□□ 2.97
SRRM2-222	ENST00000575009	SLC51A	Q86UW1	340 aa		33.6	■■■□□ 2.97
SRRM2-222	ENST00000575009	FAM89A	Q96GI7	184 aa		33.6	■■■□□ 2.97
SRRM2-222	ENST00000575009	TIAM2	Q8IVF5	1701 aa		33.59	■■■□□ 2.97
SRRM2-222	ENST00000575009	PI4KAP2	A4QPH2	592 aa		33.59	■■■□□ 2.97
SRRM2-222	ENST00000575009	HOXA10	P31260	410 aa	Predicted RBP	33.59	■■■□□ 2.97
SRRM2-222	ENST00000575009	PI4KAP1	Q8N8J0	262 aa		33.59	■■■□□ 2.97
SRRM2-222	ENST00000575009	METTL22	Q9BUU2	404 aa	Predicted RBP	33.59	■■■□□ 2.97
SRRM2-222	ENST00000575009	LMNB1	P20700	586 aa		33.58	■■■□□ 2.97
SRRM2-222	ENST00000575009	TRIM28	Q13263	835 aa	Known RBP	33.58	■■■□□ 2.97
SRRM2-222	ENST00000575009	KSR2	Q6VAB6	950 aa		33.58	■■■□□ 2.97
SRRM2-222	ENST00000575009	TAF1	P21675	1872 aa		33.57	■■■□□ 2.96
SRRM2-222	ENST00000575009	FLII	Q13045	1269 aa		33.56	■■■□□ 2.96
SRRM2-222	ENST00000575009	RBM17	Q96I25	401 aa	Known RBP	33.56	■■■□□ 2.96
SRRM2-222	ENST00000575009	GPBP1L1	Q9HC44	474 aa	Predicted RBP	33.56	■■■□□ 2.96
SRRM2-222	ENST00000575009	CCDC93	Q567U6	631 aa		33.55	■■■□□ 2.96
SRRM2-222	ENST00000575009	CDCA7L	Q96GN5	454 aa		33.55	■■■□□ 2.96
SRRM2-222	ENST00000575009	TAOK3	Q9H2K8	898 aa		33.55	■■■□□ 2.96
SRRM2-222	ENST00000575009	DICER1	Q9UPY3	1922 aa	Known RBP	33.55	■■■□□ 2.96
SRRM2-222	ENST00000575009	SOGA3	Q5TF21	947 aa		33.54	■■■□□ 2.96
SRRM2-222	ENST00000575009	CRAMP1	Q96RY5	1269 aa		33.54	■■■□□ 2.96
SRRM2-222	ENST00000575009	SLFN5	Q08AF3	891 aa		33.53	■■■□□ 2.96
SRRM2-222	ENST00000575009	JARID2	Q92833	1246 aa	Predicted RBP	33.53	■■■□□ 2.96
SRRM2-222	ENST00000575009	ABCC4	O15439	1325 aa		33.53	■■■□□ 2.96
SRRM2-222	ENST00000575009		E9PSI1	815 aa		33.52	■■■□□ 2.96
SRRM2-222	ENST00000575009	LTBP3	Q9NS15	1303 aa		33.52	■■■□□ 2.96
SRRM2-222	ENST00000575009	IGKV5-2	P06315	115 aa		33.51	■■■□□ 2.95
SRRM2-222	ENST00000575009	FKBP5	Q13451	457 aa	Predicted RBP	33.51	■■■□□ 2.95
SRRM2-222	ENST00000575009	CCDC191	Q8NCU4	936 aa		33.51	■■■□□ 2.95
SRRM2-222	ENST00000575009	CWC25	Q9NXE8	425 aa	Predicted RBP	33.51	■■■□□ 2.95
SRRM2-222	ENST00000575009	IRS4	O14654	1257 aa	Predicted RBP	33.5	■■■□□ 2.95
SRRM2-222	ENST00000575009	SNED1	Q8TER0	1413 aa		33.5	■■■□□ 2.95
SRRM2-222	ENST00000575009	PPEF1	O14829	653 aa	Predicted RBP	33.49	■■■□□ 2.95
SRRM2-222	ENST00000575009	CWF19L2	Q2TBE0	894 aa	Known RBP	33.49	■■■□□ 2.95
SRRM2-222	ENST00000575009	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.49	■■■□□ 2.95
SRRM2-222	ENST00000575009	COL4A1	P02462	1669 aa		33.48	■■■□□ 2.95
SRRM2-222	ENST00000575009	PCCA	P05165	728 aa	Predicted RBP	33.46	■■■□□ 2.95
SRRM2-222	ENST00000575009	FKBP4	Q02790	459 aa	Known RBP eCLIP	33.46	■■■□□ 2.95
SRRM2-222	ENST00000575009	NEXN	Q0ZGT2	675 aa		33.45	■■■□□ 2.95
SRRM2-222	ENST00000575009	RTKN2	Q8IZC4	609 aa		33.45	■■■□□ 2.95
SRRM2-222	ENST00000575009	NMRK2	Q9NPI5	230 aa		33.45	■■■□□ 2.95
SRRM2-222	ENST00000575009	ZNF277	Q9NRM2	450 aa	Predicted RBP	33.45	■■■□□ 2.95
SRRM2-222	ENST00000575009	NEURL1B	A8MQ27	555 aa		33.44	■■■□□ 2.94
SRRM2-222	ENST00000575009	DDX46	Q7L014	1031 aa	Known RBP	33.44	■■■□□ 2.94
SRRM2-222	ENST00000575009	DNAAF4	Q8WXU2	420 aa		33.44	■■■□□ 2.94
SRRM2-222	ENST00000575009		F6X3S4	739 aa		33.43	■■■□□ 2.94
SRRM2-222	ENST00000575009	SF3B3	Q15393	1217 aa	Known RBP	33.43	■■■□□ 2.94
SRRM2-222	ENST00000575009	ZC3H4	Q9UPT8	1303 aa	Known RBP	33.42	■■■□□ 2.94
SRRM2-222	ENST00000575009	KIF3C	O14782	793 aa		33.41	■■■□□ 2.94
SRRM2-222	ENST00000575009	GRAP	Q13588	217 aa		33.41	■■■□□ 2.94
SRRM2-222	ENST00000575009	TRMT2A	Q8IZ69	625 aa	Known RBP	33.41	■■■□□ 2.94
SRRM2-222	ENST00000575009	GRAPL	Q8TC17	118 aa	Predicted RBP	33.41	■■■□□ 2.94
SRRM2-222	ENST00000575009	CC2D2B	Q6DHV5	1058 aa		33.4	■■■□□ 2.94
SRRM2-222	ENST00000575009	ATP6V0A2	Q9Y487	856 aa		33.4	■■■□□ 2.94
SRRM2-222	ENST00000575009	CELF1	Q92879	486 aa	Known RBP	33.39	■■■□□ 2.94
SRRM2-222	ENST00000575009	MYH3	P11055	1940 aa		33.38	■■■□□ 2.93

Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms