RNA–Protein interactions for RNA: ENST00000574703.5

LITAF-214, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-214ENST00000574703 METTL22Q9BUU2 404 aaPredicted RBP20.69■□□□□ 0.9
LITAF-214ENST00000574703 BCS1LQ9Y276 419 aa20.69■□□□□ 0.9
LITAF-214ENST00000574703 MAP3K2Q9Y2U5 619 aa20.69■□□□□ 0.9
LITAF-214ENST00000574703 ARFGEF2Q9Y6D5 1785 aa20.69■□□□□ 0.9
LITAF-214ENST00000574703 KLRG2A4D1S0 409 aaPredicted RBP20.68■□□□□ 0.9
LITAF-214ENST00000574703 CT47B1P0C2W7 299 aaPredicted RBP20.68■□□□□ 0.9
LITAF-214ENST00000574703 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
LITAF-214ENST00000574703 MYD88Q99836 296 aa20.68■□□□□ 0.9
LITAF-214ENST00000574703 TRMT112Q9UI30 125 aaKnown RBP20.68■□□□□ 0.9
LITAF-214ENST00000574703 SRGNP10124 158 aa20.67■□□□□ 0.9
LITAF-214ENST00000574703 FKBP5Q13451 457 aaPredicted RBP20.67■□□□□ 0.9
LITAF-214ENST00000574703 ADCY9O60503 1353 aa20.67■□□□□ 0.9
LITAF-214ENST00000574703 RIC1Q4ADV7 1423 aa20.67■□□□□ 0.9
LITAF-214ENST00000574703 UTRNP46939 3433 aa20.67■□□□□ 0.9
LITAF-214ENST00000574703 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
LITAF-214ENST00000574703 STYK1Q6J9G0 422 aa20.66■□□□□ 0.9
LITAF-214ENST00000574703 TTLL6Q8N841 843 aa20.66■□□□□ 0.9
LITAF-214ENST00000574703 ZNF622Q969S3 477 aaKnown RBP eCLIP20.66■□□□□ 0.9
LITAF-214ENST00000574703 ZBED9Q6R2W3 1325 aa20.66■□□□□ 0.9
LITAF-214ENST00000574703 ABCC12Q96J65 1359 aa20.66■□□□□ 0.9
LITAF-214ENST00000574703 BRCA1P38398 1863 aaKnown RBP20.66■□□□□ 0.9
LITAF-214ENST00000574703 SH3TC1Q8TE82 1336 aa20.65■□□□□ 0.9
LITAF-214ENST00000574703 NEXNQ0ZGT2 675 aa20.65■□□□□ 0.9
LITAF-214ENST00000574703 CCDC191Q8NCU4 936 aa20.65■□□□□ 0.9
LITAF-214ENST00000574703 MASTLQ96GX5 879 aa20.65■□□□□ 0.9
LITAF-214ENST00000574703 DLEC1Q9Y238 1755 aa20.64■□□□□ 0.9
LITAF-214ENST00000574703 NPR1P16066 1061 aa20.64■□□□□ 0.89
LITAF-214ENST00000574703 ALDH1L2Q3SY69 923 aa20.64■□□□□ 0.89
LITAF-214ENST00000574703 CNKSR1Q969H4 720 aa20.64■□□□□ 0.89
LITAF-214ENST00000574703 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
LITAF-214ENST00000574703 MRPL50Q8N5N7 158 aaKnown RBP20.63■□□□□ 0.89
LITAF-214ENST00000574703 DNAAF4Q8WXU2 420 aa20.63■□□□□ 0.89
LITAF-214ENST00000574703 SSH1Q8WYL5 1049 aa20.63■□□□□ 0.89
LITAF-214ENST00000574703 NLRP3Q96P20 1036 aa20.63■□□□□ 0.89
LITAF-214ENST00000574703 CWC25Q9NXE8 425 aaPredicted RBP20.63■□□□□ 0.89
LITAF-214ENST00000574703 ZBTB38Q8NAP3 1195 aaPredicted RBP20.62■□□□□ 0.89
LITAF-214ENST00000574703 COL11A2P13942 1736 aaPredicted RBP20.61■□□□□ 0.89
LITAF-214ENST00000574703 IGKV5-2P06315 115 aa20.61■□□□□ 0.89
LITAF-214ENST00000574703 SYNE4Q8N205 404 aa20.61■□□□□ 0.89
LITAF-214ENST00000574703 FAM89AQ96GI7 184 aa20.61■□□□□ 0.89
LITAF-214ENST00000574703 HCLS1P14317 486 aaPredicted RBP20.6■□□□□ 0.89
LITAF-214ENST00000574703 ALDH1B1P30837 517 aa20.6■□□□□ 0.89
LITAF-214ENST00000574703 LINS1Q8NG48 757 aa20.6■□□□□ 0.89
LITAF-214ENST00000574703 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
LITAF-214ENST00000574703 ARFGEF1Q9Y6D6 1849 aa20.6■□□□□ 0.89
LITAF-214ENST00000574703 PCCAP05165 728 aaPredicted RBP20.59■□□□□ 0.89
LITAF-214ENST00000574703 HSP90B1P14625 803 aaKnown RBP20.59■□□□□ 0.89
LITAF-214ENST00000574703 HOXA10P31260 410 aaPredicted RBP20.59■□□□□ 0.89
LITAF-214ENST00000574703 RPGRQ92834 1020 aaKnown RBP20.59■□□□□ 0.89
LITAF-214ENST00000574703 BCL2L13Q9BXK5 485 aa20.59■□□□□ 0.89
LITAF-214ENST00000574703 SMC4Q9NTJ3 1288 aa20.59■□□□□ 0.89
LITAF-214ENST00000574703 PTPRCP08575 1304 aa20.58■□□□□ 0.89
LITAF-214ENST00000574703 NEURL1BA8MQ27 555 aa20.58■□□□□ 0.89
LITAF-214ENST00000574703 F6X3S4 739 aa20.58■□□□□ 0.89
LITAF-214ENST00000574703 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.89
LITAF-214ENST00000574703 RTL5Q5HYW3 569 aaPredicted RBP20.58■□□□□ 0.89
LITAF-214ENST00000574703 PRPF40BQ6NWY9 871 aaKnown RBP20.58■□□□□ 0.89
LITAF-214ENST00000574703 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
LITAF-214ENST00000574703 C3orf67Q6ZVT6 689 aa20.58■□□□□ 0.89
LITAF-214ENST00000574703 IRS4O14654 1257 aaPredicted RBP20.57■□□□□ 0.88
LITAF-214ENST00000574703 RBM17Q96I25 401 aaKnown RBP20.57■□□□□ 0.88
LITAF-214ENST00000574703 RARSP54136 660 aaKnown RBP20.56■□□□□ 0.88
LITAF-214ENST00000574703 CRAMP1Q96RY5 1269 aa20.56■□□□□ 0.88
LITAF-214ENST00000574703 C21orf2O43822 256 aa20.55■□□□□ 0.88
LITAF-214ENST00000574703 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
LITAF-214ENST00000574703 GCKRQ14397 625 aa20.55■□□□□ 0.88
LITAF-214ENST00000574703 BEND3Q5T5X7 828 aa20.55■□□□□ 0.88
LITAF-214ENST00000574703 SF3B3Q15393 1217 aaKnown RBP20.54■□□□□ 0.88
LITAF-214ENST00000574703 SOGA3Q5TF21 947 aa20.54■□□□□ 0.88
LITAF-214ENST00000574703 SLC4A10Q6U841 1118 aa20.54■□□□□ 0.88
LITAF-214ENST00000574703 C7orf43Q8WVR3 580 aa20.54■□□□□ 0.88
LITAF-214ENST00000574703 CHD4Q14839 1912 aa20.54■□□□□ 0.88
LITAF-214ENST00000574703 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
LITAF-214ENST00000574703 SLX4Q8IY92 1834 aa20.53■□□□□ 0.88
LITAF-214ENST00000574703 H7C1W4 665 aa20.53■□□□□ 0.88
LITAF-214ENST00000574703 YY1P25490 414 aa20.53■□□□□ 0.88
LITAF-214ENST00000574703 JARID2Q92833 1246 aaPredicted RBP20.53■□□□□ 0.88
LITAF-214ENST00000574703 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
LITAF-214ENST00000574703 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
LITAF-214ENST00000574703 PDE8AO60658 829 aa20.52■□□□□ 0.88
LITAF-214ENST00000574703 DDX46Q7L014 1031 aaKnown RBP20.52■□□□□ 0.88
LITAF-214ENST00000574703 SRCIN1Q9C0H9 1055 aa20.52■□□□□ 0.88
LITAF-214ENST00000574703 ALDH1L1O75891 902 aa20.51■□□□□ 0.87
LITAF-214ENST00000574703 UBE3BQ7Z3V4 1068 aa20.51■□□□□ 0.87
LITAF-214ENST00000574703 NOB1Q9ULX3 412 aaKnown RBP20.51■□□□□ 0.87
LITAF-214ENST00000574703 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
LITAF-214ENST00000574703 LAMB2P55268 1798 aa20.5■□□□□ 0.87
LITAF-214ENST00000574703 ABCC4O15439 1325 aa20.5■□□□□ 0.87
LITAF-214ENST00000574703 KIF16BQ96L93 1317 aa20.5■□□□□ 0.87
LITAF-214ENST00000574703 BBOX1O75936 387 aa20.49■□□□□ 0.87
LITAF-214ENST00000574703 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
LITAF-214ENST00000574703 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
LITAF-214ENST00000574703 API5Q9BZZ5 524 aaKnown RBP20.49■□□□□ 0.87
LITAF-214ENST00000574703 GRM8O00222 908 aa20.48■□□□□ 0.87
LITAF-214ENST00000574703 PPEF1O14829 653 aaPredicted RBP20.48■□□□□ 0.87
LITAF-214ENST00000574703 GRAPQ13588 217 aa20.48■□□□□ 0.87
LITAF-214ENST00000574703 CCDC152Q4G0S7 254 aa20.48■□□□□ 0.87
LITAF-214ENST00000574703 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
LITAF-214ENST00000574703 ARHGAP45Q92619 1136 aa20.48■□□□□ 0.87
LITAF-214ENST00000574703 NFKBIEO00221 500 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms