RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 ZNF34Q8IZ26 560 aa19.92■□□□□ 0.78
SMPD3-212ENST00000574662 USP42Q9H9J4 1324 aaKnown RBP19.91■□□□□ 0.78
SMPD3-212ENST00000574662 TRIM28Q13263 835 aaKnown RBP19.91■□□□□ 0.78
SMPD3-212ENST00000574662 JARID2Q92833 1246 aaPredicted RBP19.91■□□□□ 0.78
SMPD3-212ENST00000574662 NBPF7P0C2Y1 421 aaPredicted RBP19.9■□□□□ 0.78
SMPD3-212ENST00000574662 RGS3P49796 1198 aa19.9■□□□□ 0.78
SMPD3-212ENST00000574662 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
SMPD3-212ENST00000574662 PNPLA7Q6ZV29 1317 aa19.9■□□□□ 0.78
SMPD3-212ENST00000574662 NUP98P52948 1817 aa19.9■□□□□ 0.78
SMPD3-212ENST00000574662 HSP90AB3PQ58FF7 597 aa19.9■□□□□ 0.78
SMPD3-212ENST00000574662 STK32BQ9NY57 414 aa19.9■□□□□ 0.78
SMPD3-212ENST00000574662 NLRP10Q86W26 655 aa19.89■□□□□ 0.77
SMPD3-212ENST00000574662 CCDC191Q8NCU4 936 aa19.89■□□□□ 0.77
SMPD3-212ENST00000574662 C1orf115Q9H7X2 142 aa19.89■□□□□ 0.77
SMPD3-212ENST00000574662 CWC25Q9NXE8 425 aaPredicted RBP19.89■□□□□ 0.77
SMPD3-212ENST00000574662 PCDHB15Q9Y5E8 787 aa19.89■□□□□ 0.77
SMPD3-212ENST00000574662 UBN2Q6ZU65 1347 aa19.89■□□□□ 0.77
SMPD3-212ENST00000574662 N4BP2Q86UW6 1770 aaPredicted RBP19.89■□□□□ 0.77
SMPD3-212ENST00000574662 TBC1D9BQ66K14 1250 aa19.88■□□□□ 0.77
SMPD3-212ENST00000574662 C9orf78Q9NZ63 289 aaPredicted RBP19.88■□□□□ 0.77
SMPD3-212ENST00000574662 C4AP0C0L4 1744 aa19.88■□□□□ 0.77
SMPD3-212ENST00000574662 GRM8O00222 908 aa19.88■□□□□ 0.77
SMPD3-212ENST00000574662 GYS1P13807 737 aa19.88■□□□□ 0.77
SMPD3-212ENST00000574662 ZNF652Q9Y2D9 606 aa19.88■□□□□ 0.77
SMPD3-212ENST00000574662 TUBGCP6Q96RT7 1819 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 UTYO14607 1347 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 BCORQ6W2J9 1755 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 H7C1W4 665 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 RGL2O15211 777 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 GNAI3P08754 354 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 BICDL1Q6ZP65 573 aa19.87■□□□□ 0.77
SMPD3-212ENST00000574662 NIP7Q9Y221 180 aaKnown RBP eCLIP19.87■□□□□ 0.77
SMPD3-212ENST00000574662 IBTKQ9P2D0 1353 aaPredicted RBP19.86■□□□□ 0.77
SMPD3-212ENST00000574662 SUSD4Q5VX71 490 aa19.86■□□□□ 0.77
SMPD3-212ENST00000574662 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
SMPD3-212ENST00000574662 CHMP4BQ9H444 224 aaKnown RBP19.86■□□□□ 0.77
SMPD3-212ENST00000574662 UBTFL1P0CB47 393 aaPredicted RBP19.85■□□□□ 0.77
SMPD3-212ENST00000574662 CASP7P55210 303 aa19.85■□□□□ 0.77
SMPD3-212ENST00000574662 SYNE4Q8N205 404 aa19.85■□□□□ 0.77
SMPD3-212ENST00000574662 SCN7AQ01118 1682 aa19.85■□□□□ 0.77
SMPD3-212ENST00000574662 IGHDP01880 384 aa19.85■□□□□ 0.77
SMPD3-212ENST00000574662 UBE3BQ7Z3V4 1068 aa19.85■□□□□ 0.77
SMPD3-212ENST00000574662 PDGFDQ9GZP0 370 aaPredicted RBP19.85■□□□□ 0.77
SMPD3-212ENST00000574662 FAM177BA6PVY3 158 aa19.84■□□□□ 0.77
SMPD3-212ENST00000574662 GNAI2P04899 355 aa19.84■□□□□ 0.77
SMPD3-212ENST00000574662 FAM89AQ96GI7 184 aa19.84■□□□□ 0.77
SMPD3-212ENST00000574662 KAZALD1Q96I82 304 aa19.84■□□□□ 0.77
SMPD3-212ENST00000574662 SUCLG2Q96I99 432 aa19.84■□□□□ 0.77
SMPD3-212ENST00000574662 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
SMPD3-212ENST00000574662 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
SMPD3-212ENST00000574662 NFIXQ14938 502 aa19.83■□□□□ 0.76
SMPD3-212ENST00000574662 PARP10Q53GL7 1025 aa19.83■□□□□ 0.76
SMPD3-212ENST00000574662 ZBTB38Q8NAP3 1195 aaPredicted RBP19.83■□□□□ 0.76
SMPD3-212ENST00000574662 TRMT112Q9UI30 125 aaKnown RBP19.83■□□□□ 0.76
SMPD3-212ENST00000574662 ANKRD36CQ5JPF3 1778 aa19.82■□□□□ 0.76
SMPD3-212ENST00000574662 PCCAP05165 728 aaPredicted RBP19.82■□□□□ 0.76
SMPD3-212ENST00000574662 TM4SF1P30408 202 aa19.82■□□□□ 0.76
SMPD3-212ENST00000574662 EPHA10Q5JZY3 1008 aa19.82■□□□□ 0.76
SMPD3-212ENST00000574662 SIRT2Q8IXJ6 389 aa19.82■□□□□ 0.76
SMPD3-212ENST00000574662 SETDB2Q96T68 719 aa19.82■□□□□ 0.76
SMPD3-212ENST00000574662 UTP14AQ9BVJ6 771 aaKnown RBP19.81■□□□□ 0.76
SMPD3-212ENST00000574662 NTSR2O95665 410 aa19.8■□□□□ 0.76
SMPD3-212ENST00000574662 CEP85Q6P2H3 762 aa19.8■□□□□ 0.76
SMPD3-212ENST00000574662 PPP1R42Q7Z4L9 355 aa19.8■□□□□ 0.76
SMPD3-212ENST00000574662 NUTM1Q86Y26 1132 aa19.79■□□□□ 0.76
SMPD3-212ENST00000574662 BICC1Q9H694 974 aaKnown RBP19.79■□□□□ 0.76
SMPD3-212ENST00000574662 FOXO4P98177 505 aa19.78■□□□□ 0.76
SMPD3-212ENST00000574662 NFKBIBQ15653 356 aa19.78■□□□□ 0.76
SMPD3-212ENST00000574662 MSL1Q68DK7 614 aa19.78■□□□□ 0.76
SMPD3-212ENST00000574662 NLGN1Q8N2Q7 840 aa19.78■□□□□ 0.76
SMPD3-212ENST00000574662 ANKRD44Q8N8A2 993 aa19.78■□□□□ 0.76
SMPD3-212ENST00000574662 DDR1Q08345 913 aa19.78■□□□□ 0.76
SMPD3-212ENST00000574662 PNMA6EA0A0J9YXQ4 647 aa19.77■□□□□ 0.76
SMPD3-212ENST00000574662 ATP8B2P98198 1209 aa19.77■□□□□ 0.76
SMPD3-212ENST00000574662 RPAP2Q8IXW5 612 aaPredicted RBP19.77■□□□□ 0.76
SMPD3-212ENST00000574662 RWDD1Q9H446 243 aaPredicted RBP19.77■□□□□ 0.76
SMPD3-212ENST00000574662 QSER1Q2KHR3 1735 aa19.77■□□□□ 0.75
SMPD3-212ENST00000574662 SH3TC1Q8TE82 1336 aa19.76■□□□□ 0.75
SMPD3-212ENST00000574662 CDHR2Q9BYE9 1310 aa19.76■□□□□ 0.75
SMPD3-212ENST00000574662 IRS4O14654 1257 aaPredicted RBP19.76■□□□□ 0.75
SMPD3-212ENST00000574662 HCLS1P14317 486 aaPredicted RBP19.76■□□□□ 0.75
SMPD3-212ENST00000574662 ERFEQ4G0M1 354 aa19.76■□□□□ 0.75
SMPD3-212ENST00000574662 NBPF5PQ86XG9 351 aaPredicted RBP19.76■□□□□ 0.75
SMPD3-212ENST00000574662 CCDC24Q8N4L8 307 aa19.76■□□□□ 0.75
SMPD3-212ENST00000574662 R3HDM1Q15032 1099 aaKnown RBP19.75■□□□□ 0.75
SMPD3-212ENST00000574662 HDAC5Q9UQL6 1122 aa19.75■□□□□ 0.75
SMPD3-212ENST00000574662 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
SMPD3-212ENST00000574662 SERPINB2P05120 415 aa19.75■□□□□ 0.75
SMPD3-212ENST00000574662 BECN1Q14457 450 aa19.75■□□□□ 0.75
SMPD3-212ENST00000574662 PLA2G12BQ9BX93 195 aa19.75■□□□□ 0.75
SMPD3-212ENST00000574662 CARMIL3Q8ND23 1372 aa19.74■□□□□ 0.75
SMPD3-212ENST00000574662 PSDA5PKW4 1024 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-212ENST00000574662 HDAC1Q13547 482 aaPredicted RBP19.74■□□□□ 0.75
SMPD3-212ENST00000574662 LMBR1LQ6UX01 489 aa19.74■□□□□ 0.75
SMPD3-212ENST00000574662 TPTE2Q6XPS3 522 aa19.74■□□□□ 0.75
SMPD3-212ENST00000574662 NYXQ9GZU5 481 aa19.74■□□□□ 0.75
SMPD3-212ENST00000574662 MMP10P09238 476 aa19.73■□□□□ 0.75
SMPD3-212ENST00000574662 SLC4A3P48751 1232 aa19.73■□□□□ 0.75
SMPD3-212ENST00000574662 MTX1Q13505 466 aa19.73■□□□□ 0.75
SMPD3-212ENST00000574662 RABL6Q3YEC7 729 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms