RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CDC25BP30305 580 aa17■□□□□ 0.31
SMG6-215ENST00000574501 LARP1Q6PKG0 1096 aaKnown RBP17■□□□□ 0.31
SMG6-215ENST00000574501 CCZ1BP86790 482 aa16.99■□□□□ 0.31
SMG6-215ENST00000574501 CCZ1P86791 482 aaPredicted RBP16.99■□□□□ 0.31
SMG6-215ENST00000574501 IQCB1Q15051 598 aa16.99■□□□□ 0.31
SMG6-215ENST00000574501 CCAR2Q8N163 923 aaKnown RBP16.99■□□□□ 0.31
SMG6-215ENST00000574501 RICTORQ6R327 1708 aa16.99■□□□□ 0.31
SMG6-215ENST00000574501 CYP2C19P33261 490 aa16.99■□□□□ 0.31
SMG6-215ENST00000574501 SSH3Q8TE77 659 aa16.99■□□□□ 0.31
SMG6-215ENST00000574501 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 SOX12O15370 315 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 RAB11FIP3O75154 756 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 STK3Q13188 491 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 BMS1Q14692 1282 aaKnown RBP16.98■□□□□ 0.31
SMG6-215ENST00000574501 SLFNL1Q499Z3 407 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 HSP90AB2PQ58FF8 381 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 CPS1P31327 1500 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 FHOD1Q9Y613 1164 aa16.98■□□□□ 0.31
SMG6-215ENST00000574501 SRGAP3O43295 1099 aa16.97■□□□□ 0.31
SMG6-215ENST00000574501 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
SMG6-215ENST00000574501 NEMFO60524 1076 aa16.97■□□□□ 0.31
SMG6-215ENST00000574501 CLCN6P51797 869 aa16.97■□□□□ 0.31
SMG6-215ENST00000574501 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
SMG6-215ENST00000574501 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
SMG6-215ENST00000574501 MRFAP1L1Q96HT8 127 aa16.97■□□□□ 0.31
SMG6-215ENST00000574501 PDCP20941 246 aa16.96■□□□□ 0.31
SMG6-215ENST00000574501 SLC20A2Q08357 652 aa16.96■□□□□ 0.31
SMG6-215ENST00000574501 FBXW7Q969H0 707 aa16.96■□□□□ 0.31
SMG6-215ENST00000574501 CHMP4AQ9BY43 222 aa16.96■□□□□ 0.31
SMG6-215ENST00000574501 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
SMG6-215ENST00000574501 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
SMG6-215ENST00000574501 BECN2A8MW95 431 aa16.96■□□□□ 0.3
SMG6-215ENST00000574501 H2AFXP16104 143 aaPredicted RBP16.96■□□□□ 0.3
SMG6-215ENST00000574501 ZKSCAN1P17029 563 aaPredicted RBP16.96■□□□□ 0.3
SMG6-215ENST00000574501 SARM1Q6SZW1 724 aa16.96■□□□□ 0.3
SMG6-215ENST00000574501 DDX11Q96FC9 970 aa16.96■□□□□ 0.3
SMG6-215ENST00000574501 TTC21BQ7Z4L5 1316 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 RBM8AQ9Y5S9 174 aaKnown RBP16.95■□□□□ 0.3
SMG6-215ENST00000574501 ALKQ9UM73 1620 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 POLR3GO15318 223 aaPredicted RBP16.95■□□□□ 0.3
SMG6-215ENST00000574501 PLA2G4AP47712 749 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
SMG6-215ENST00000574501 WASLO00401 505 aaPredicted RBP16.94■□□□□ 0.3
SMG6-215ENST00000574501 SNW1Q13573 536 aaKnown RBP16.94■□□□□ 0.3
SMG6-215ENST00000574501 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
SMG6-215ENST00000574501 SYT10Q6XYQ8 523 aa16.94■□□□□ 0.3
SMG6-215ENST00000574501 NEK11Q8NG66 645 aa16.94■□□□□ 0.3
SMG6-215ENST00000574501 NUDT16Q96DE0 195 aaKnown RBP16.94■□□□□ 0.3
SMG6-215ENST00000574501 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.94■□□□□ 0.3
SMG6-215ENST00000574501 PNMA6AP0CW24 399 aaPredicted RBP16.94■□□□□ 0.3
SMG6-215ENST00000574501 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
SMG6-215ENST00000574501 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
SMG6-215ENST00000574501 POLA2Q14181 598 aa16.93■□□□□ 0.3
SMG6-215ENST00000574501 ARHGAP29Q52LW3 1261 aa16.93■□□□□ 0.3
SMG6-215ENST00000574501 ERCC4Q92889 916 aaPredicted RBP16.93■□□□□ 0.3
SMG6-215ENST00000574501 FEZ2Q9UHY8 353 aaPredicted RBP16.93■□□□□ 0.3
SMG6-215ENST00000574501 TAF6LQ9Y6J9 622 aa16.93■□□□□ 0.3
SMG6-215ENST00000574501 HTATSF1O43719 755 aaKnown RBP16.92■□□□□ 0.3
SMG6-215ENST00000574501 OS9Q13438 667 aaPredicted RBP16.92■□□□□ 0.3
SMG6-215ENST00000574501 RNF20Q5VTR2 975 aa16.92■□□□□ 0.3
SMG6-215ENST00000574501 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
SMG6-215ENST00000574501 JAK2O60674 1132 aa16.92■□□□□ 0.3
SMG6-215ENST00000574501 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
SMG6-215ENST00000574501 NBPF7P0C2Y1 421 aaPredicted RBP16.92■□□□□ 0.3
SMG6-215ENST00000574501 FAM193AP78312 1265 aa16.92■□□□□ 0.3
SMG6-215ENST00000574501 DHX40Q8IX18 779 aaKnown RBP16.92■□□□□ 0.3
SMG6-215ENST00000574501 FAM227BQ96M60 508 aa16.92■□□□□ 0.3
SMG6-215ENST00000574501 CAVIN2O95810 425 aa16.91■□□□□ 0.3
SMG6-215ENST00000574501 STX1AQ16623 288 aa16.91■□□□□ 0.3
SMG6-215ENST00000574501 FBXO31Q5XUX0 539 aaPredicted RBP16.91■□□□□ 0.3
SMG6-215ENST00000574501 E4F1Q66K89 784 aaPredicted RBP16.91■□□□□ 0.3
SMG6-215ENST00000574501 KCNB2Q92953 911 aa16.91■□□□□ 0.3
SMG6-215ENST00000574501 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
SMG6-215ENST00000574501 L2HGDHQ9H9P8 463 aa16.91■□□□□ 0.3
SMG6-215ENST00000574501 XRN1Q8IZH2 1706 aaKnown RBP16.91■□□□□ 0.3
SMG6-215ENST00000574501 SLC27A2O14975 620 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 CREBRFQ8IUR6 639 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 PPP1R13BQ96KQ4 1090 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 PDIA4P13667 645 aaKnown RBP16.9■□□□□ 0.3
SMG6-215ENST00000574501 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 CERS3Q8IU89 383 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 AOPEPQ8N6M6 819 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 FTOQ9C0B1 505 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMG6-215ENST00000574501 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
SMG6-215ENST00000574501 ADCY9O60503 1353 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 FOSBP53539 338 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 TOB2Q14106 344 aaPredicted RBP16.89■□□□□ 0.29
SMG6-215ENST00000574501 NBPF11Q86T75 865 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 KIF2AO00139 706 aaPredicted RBP16.89■□□□□ 0.29
SMG6-215ENST00000574501 SEC31AO94979 1220 aaKnown RBP16.89■□□□□ 0.29
SMG6-215ENST00000574501 ST5P78524 1137 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 CCDC93Q567U6 631 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 CCAR1Q8IX12 1150 aaKnown RBP16.89■□□□□ 0.29
SMG6-215ENST00000574501 GOLPH3LQ9H4A5 285 aa16.89■□□□□ 0.29
SMG6-215ENST00000574501 ZCCHC17Q9NP64 241 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1859.8 ms