RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 KIF3CO14782 793 aa22.08■■□□□ 1.13
CLDN7-207ENST00000574070 KCNA3P22001 575 aa22.08■■□□□ 1.13
CLDN7-207ENST00000574070 FLIIQ13045 1269 aa22.08■■□□□ 1.13
CLDN7-207ENST00000574070 FKBP5Q13451 457 aaPredicted RBP22.08■■□□□ 1.13
CLDN7-207ENST00000574070 DALRD3Q5D0E6 543 aaKnown RBP22.08■■□□□ 1.13
CLDN7-207ENST00000574070 KSR2Q6VAB6 950 aa22.08■■□□□ 1.13
CLDN7-207ENST00000574070 NLRP10Q86W26 655 aa22.08■■□□□ 1.13
CLDN7-207ENST00000574070 MAP3K2Q9Y2U5 619 aa22.08■■□□□ 1.13
CLDN7-207ENST00000574070 ANKRD36CQ5JPF3 1778 aa22.07■■□□□ 1.12
CLDN7-207ENST00000574070 PI4KAP2A4QPH2 592 aa22.07■■□□□ 1.12
CLDN7-207ENST00000574070 NTSR2O95665 410 aa22.07■■□□□ 1.12
CLDN7-207ENST00000574070 PI4KAP1Q8N8J0 262 aa22.07■■□□□ 1.12
CLDN7-207ENST00000574070 TRMT112Q9UI30 125 aaKnown RBP22.07■■□□□ 1.12
CLDN7-207ENST00000574070 IBTKQ9P2D0 1353 aaPredicted RBP22.07■■□□□ 1.12
CLDN7-207ENST00000574070 ISCA1Q9BUE6 129 aa22.06■■□□□ 1.12
CLDN7-207ENST00000574070 ARFGEF2Q9Y6D5 1785 aa22.06■■□□□ 1.12
CLDN7-207ENST00000574070 ANKRD31Q8N7Z5 1873 aa22.05■■□□□ 1.12
CLDN7-207ENST00000574070 ABCC12Q96J65 1359 aa22.05■■□□□ 1.12
CLDN7-207ENST00000574070 NEXNQ0ZGT2 675 aa22.05■■□□□ 1.12
CLDN7-207ENST00000574070 TRMT2AQ8IZ69 625 aaKnown RBP22.05■■□□□ 1.12
CLDN7-207ENST00000574070 METTL22Q9BUU2 404 aaPredicted RBP22.05■■□□□ 1.12
CLDN7-207ENST00000574070 TTLL6Q8N841 843 aa22.04■■□□□ 1.12
CLDN7-207ENST00000574070 MASTLQ96GX5 879 aa22.04■■□□□ 1.12
CLDN7-207ENST00000574070 RNF123Q5XPI4 1314 aa22.03■■□□□ 1.12
CLDN7-207ENST00000574070 SH3TC1Q8TE82 1336 aa22.03■■□□□ 1.12
CLDN7-207ENST00000574070 TOMM70O94826 608 aa22.02■■□□□ 1.12
CLDN7-207ENST00000574070 RTL5Q5HYW3 569 aaPredicted RBP22.02■■□□□ 1.12
CLDN7-207ENST00000574070 NLRP3Q96P20 1036 aa22.02■■□□□ 1.12
CLDN7-207ENST00000574070 SRGNP10124 158 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 NPR1P16066 1061 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 STYK1Q6J9G0 422 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 DNAAF4Q8WXU2 420 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 RPGRQ92834 1020 aaKnown RBP22.01■■□□□ 1.11
CLDN7-207ENST00000574070 CNKSR1Q969H4 720 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 BCL2L13Q9BXK5 485 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 CWC25Q9NXE8 425 aaPredicted RBP22.01■■□□□ 1.11
CLDN7-207ENST00000574070 CACNA1FO60840 1977 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 ZBED9Q6R2W3 1325 aa22.01■■□□□ 1.11
CLDN7-207ENST00000574070 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
CLDN7-207ENST00000574070 TRIM28Q13263 835 aaKnown RBP22■■□□□ 1.11
CLDN7-207ENST00000574070 ARHGAP27Q6ZUM4 889 aa22■■□□□ 1.11
CLDN7-207ENST00000574070 MRPL50Q8N5N7 158 aaKnown RBP22■■□□□ 1.11
CLDN7-207ENST00000574070 CCDC191Q8NCU4 936 aa22■■□□□ 1.11
CLDN7-207ENST00000574070 SSH1Q8WYL5 1049 aa22■■□□□ 1.11
CLDN7-207ENST00000574070 FAM89AQ96GI7 184 aa22■■□□□ 1.11
CLDN7-207ENST00000574070 ZNF219Q9P2Y4 722 aaPredicted RBP22■■□□□ 1.11
CLDN7-207ENST00000574070 BRCA1P38398 1863 aaKnown RBP22■■□□□ 1.11
CLDN7-207ENST00000574070 CT47B1P0C2W7 299 aaPredicted RBP21.99■■□□□ 1.11
CLDN7-207ENST00000574070 SYNE4Q8N205 404 aa21.99■■□□□ 1.11
CLDN7-207ENST00000574070 SMC4Q9NTJ3 1288 aa21.99■■□□□ 1.11
CLDN7-207ENST00000574070 COL11A2P13942 1736 aaPredicted RBP21.99■■□□□ 1.11
CLDN7-207ENST00000574070 DLEC1Q9Y238 1755 aa21.98■■□□□ 1.11
CLDN7-207ENST00000574070 KLRG2A4D1S0 409 aaPredicted RBP21.98■■□□□ 1.11
CLDN7-207ENST00000574070 SLC10A5Q5PT55 438 aa21.98■■□□□ 1.11
CLDN7-207ENST00000574070 TNRC6CQ9HCJ0 1690 aaKnown RBP21.98■■□□□ 1.11
CLDN7-207ENST00000574070 F6X3S4 739 aa21.97■■□□□ 1.11
CLDN7-207ENST00000574070 ALDH1B1P30837 517 aa21.97■■□□□ 1.11
CLDN7-207ENST00000574070 CWF19L2Q2TBE0 894 aaKnown RBP21.97■■□□□ 1.11
CLDN7-207ENST00000574070 ALDH1L2Q3SY69 923 aa21.97■■□□□ 1.11
CLDN7-207ENST00000574070 WDR90Q96KV7 1748 aa21.97■■□□□ 1.11
CLDN7-207ENST00000574070 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
CLDN7-207ENST00000574070 C3orf67Q6ZVT6 689 aa21.96■■□□□ 1.11
CLDN7-207ENST00000574070 ZBTB38Q8NAP3 1195 aaPredicted RBP21.96■■□□□ 1.11
CLDN7-207ENST00000574070 JARID2Q92833 1246 aaPredicted RBP21.96■■□□□ 1.11
CLDN7-207ENST00000574070 RBM17Q96I25 401 aaKnown RBP21.96■■□□□ 1.11
CLDN7-207ENST00000574070 NEURL1BA8MQ27 555 aa21.95■■□□□ 1.1
CLDN7-207ENST00000574070 IRS4O14654 1257 aaPredicted RBP21.95■■□□□ 1.1
CLDN7-207ENST00000574070 C21orf2O43822 256 aa21.95■■□□□ 1.1
CLDN7-207ENST00000574070 IGKV5-2P06315 115 aa21.95■■□□□ 1.1
CLDN7-207ENST00000574070 CRY2Q49AN0 593 aa21.95■■□□□ 1.1
CLDN7-207ENST00000574070 PRPF40BQ6NWY9 871 aaKnown RBP21.95■■□□□ 1.1
CLDN7-207ENST00000574070 SLC4A10Q6U841 1118 aa21.95■■□□□ 1.1
CLDN7-207ENST00000574070 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
CLDN7-207ENST00000574070 PCCAP05165 728 aaPredicted RBP21.94■■□□□ 1.1
CLDN7-207ENST00000574070 HSP90B1P14625 803 aaKnown RBP21.94■■□□□ 1.1
CLDN7-207ENST00000574070 C16orf71Q8IYS4 520 aaPredicted RBP21.94■■□□□ 1.1
CLDN7-207ENST00000574070 ARFGEF1Q9Y6D6 1849 aa21.94■■□□□ 1.1
CLDN7-207ENST00000574070 LINS1Q8NG48 757 aa21.93■■□□□ 1.1
CLDN7-207ENST00000574070 CACNA1SQ13698 1873 aa21.92■■□□□ 1.1
CLDN7-207ENST00000574070 PTPRCP08575 1304 aa21.92■■□□□ 1.1
CLDN7-207ENST00000574070 DDX46Q7L014 1031 aaKnown RBP21.91■■□□□ 1.1
CLDN7-207ENST00000574070 RBM46Q8TBY0 533 aaKnown RBP21.91■■□□□ 1.1
CLDN7-207ENST00000574070 NMRK2Q9NPI5 230 aa21.91■■□□□ 1.1
CLDN7-207ENST00000574070 HOXA10P31260 410 aaPredicted RBP21.9■■□□□ 1.1
CLDN7-207ENST00000574070 RARSP54136 660 aaKnown RBP21.9■■□□□ 1.1
CLDN7-207ENST00000574070 GCKRQ14397 625 aa21.9■■□□□ 1.1
CLDN7-207ENST00000574070 BEND3Q5T5X7 828 aa21.9■■□□□ 1.1
CLDN7-207ENST00000574070 SOGA3Q5TF21 947 aa21.9■■□□□ 1.1
CLDN7-207ENST00000574070 CRAMP1Q96RY5 1269 aa21.9■■□□□ 1.1
CLDN7-207ENST00000574070 PDE8AO60658 829 aa21.89■■□□□ 1.09
CLDN7-207ENST00000574070 UBE3BQ7Z3V4 1068 aa21.89■■□□□ 1.09
CLDN7-207ENST00000574070 SRCIN1Q9C0H9 1055 aa21.89■■□□□ 1.09
CLDN7-207ENST00000574070 TMX4Q9H1E5 349 aaPredicted RBP21.89■■□□□ 1.09
CLDN7-207ENST00000574070 NOB1Q9ULX3 412 aaKnown RBP21.89■■□□□ 1.09
CLDN7-207ENST00000574070 SLX4Q8IY92 1834 aa21.89■■□□□ 1.09
CLDN7-207ENST00000574070 RASSF7Q02833 373 aa21.88■■□□□ 1.09
CLDN7-207ENST00000574070 CCDC93Q567U6 631 aa21.88■■□□□ 1.09
CLDN7-207ENST00000574070 DDX60Q8IY21 1712 aaKnown RBP21.88■■□□□ 1.09
CLDN7-207ENST00000574070 ABCC4O15439 1325 aa21.87■■□□□ 1.09
CLDN7-207ENST00000574070 CDHR2Q9BYE9 1310 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms