RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PDE6BP35913 854 aa14.09□□□□□ -0.15
CHD3-216ENST00000573936 FLIIQ13045 1269 aa14.09□□□□□ -0.15
CHD3-216ENST00000573936 PRR5LQ6MZQ0 368 aa14.09□□□□□ -0.15
CHD3-216ENST00000573936 BRIP1Q9BX63 1249 aa14.09□□□□□ -0.15
CHD3-216ENST00000573936 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
CHD3-216ENST00000573936 NRXN2Q9P2S2 1712 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 CAPN15O75808 1086 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 ALDH1L2Q3SY69 923 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 KSR2Q6VAB6 950 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 RNF181Q9P0P0 153 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 RNF123Q5XPI4 1314 aa14.08□□□□□ -0.16
CHD3-216ENST00000573936 DLEC1Q9Y238 1755 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 NEXNQ0ZGT2 675 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 TRIM28Q13263 835 aaKnown RBP14.07□□□□□ -0.16
CHD3-216ENST00000573936 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
CHD3-216ENST00000573936 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 ISCA1Q9BUE6 129 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 METTL22Q9BUU2 404 aaPredicted RBP14.07□□□□□ -0.16
CHD3-216ENST00000573936 UTP14AQ9BVJ6 771 aaKnown RBP14.07□□□□□ -0.16
CHD3-216ENST00000573936 RRAGCQ9HB90 399 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 PCNTO95613 3336 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 UBN2Q6ZU65 1347 aa14.07□□□□□ -0.16
CHD3-216ENST00000573936 NUP98P52948 1817 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 PI4KAP2A4QPH2 592 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 H0YIN7 160 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 G2E3Q7L622 706 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 NLRP10Q86W26 655 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 PI4KAP1Q8N8J0 262 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 MAP3K2Q9Y2U5 619 aa14.06□□□□□ -0.16
CHD3-216ENST00000573936 WDR90Q96KV7 1748 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 NTSR2O95665 410 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 HTRA3P83110 453 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 C2CD5Q86YS7 1000 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
CHD3-216ENST00000573936 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 MYD88Q99836 296 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 SBF1O95248 1867 aa14.05□□□□□ -0.16
CHD3-216ENST00000573936 ATP5J2-PTCD1G3V325 749 aa14.04□□□□□ -0.16
CHD3-216ENST00000573936 RASSF7Q02833 373 aa14.04□□□□□ -0.16
CHD3-216ENST00000573936 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
CHD3-216ENST00000573936 TNS4Q8IZW8 715 aa14.04□□□□□ -0.16
CHD3-216ENST00000573936 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
CHD3-216ENST00000573936 DNAAF4Q8WXU2 420 aa14.04□□□□□ -0.16
CHD3-216ENST00000573936 SSH1Q8WYL5 1049 aa14.04□□□□□ -0.16
CHD3-216ENST00000573936 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
CHD3-216ENST00000573936 TNRC6CQ9HCJ0 1690 aaKnown RBP14.04□□□□□ -0.16
CHD3-216ENST00000573936 CACNA1FO60840 1977 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 HSP90B1P14625 803 aaKnown RBP14.03□□□□□ -0.16
CHD3-216ENST00000573936 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
CHD3-216ENST00000573936 ERFEQ4G0M1 354 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 SLC10A5Q5PT55 438 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 CCDC24Q8N4L8 307 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 JMYQ8N9B5 988 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 CWC25Q9NXE8 425 aaPredicted RBP14.03□□□□□ -0.16
CHD3-216ENST00000573936 PTPRCP08575 1304 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 TIAM2Q8IVF5 1701 aa14.03□□□□□ -0.16
CHD3-216ENST00000573936 COL11A2P13942 1736 aaPredicted RBP14.02□□□□□ -0.16
CHD3-216ENST00000573936 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
CHD3-216ENST00000573936 KLRG2A4D1S0 409 aaPredicted RBP14.02□□□□□ -0.17
CHD3-216ENST00000573936 RARSP54136 660 aaKnown RBP14.02□□□□□ -0.17
CHD3-216ENST00000573936 MASTLQ96GX5 879 aa14.02□□□□□ -0.17
CHD3-216ENST00000573936 YTHDC1Q96MU7 727 aaKnown RBP14.02□□□□□ -0.17
CHD3-216ENST00000573936 NLRP3Q96P20 1036 aa14.02□□□□□ -0.17
CHD3-216ENST00000573936 ANKRD31Q8N7Z5 1873 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 RIC1Q4ADV7 1423 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 SRGNP10124 158 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 NPR1P16066 1061 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 STYK1Q6J9G0 422 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 TTLL6Q8N841 843 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 ZBTB38Q8NAP3 1195 aaPredicted RBP14.01□□□□□ -0.17
CHD3-216ENST00000573936 CNKSR1Q969H4 720 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 ZNF622Q969S3 477 aaKnown RBP eCLIP14.01□□□□□ -0.17
CHD3-216ENST00000573936 ANKRD36CQ5JPF3 1778 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 ARFGEF2Q9Y6D5 1785 aa14.01□□□□□ -0.17
CHD3-216ENST00000573936 PCCAP05165 728 aaPredicted RBP14□□□□□ -0.17
CHD3-216ENST00000573936 IGKV5-2P06315 115 aa14□□□□□ -0.17
CHD3-216ENST00000573936 VEGFAP15692 232 aaPredicted RBP14□□□□□ -0.17
CHD3-216ENST00000573936 LINS1Q8NG48 757 aa14□□□□□ -0.17
CHD3-216ENST00000573936 BCL2L13Q9BXK5 485 aa14□□□□□ -0.17
CHD3-216ENST00000573936 NEURL1BA8MQ27 555 aa13.99□□□□□ -0.17
CHD3-216ENST00000573936 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
CHD3-216ENST00000573936 FAM89AQ96GI7 184 aa13.99□□□□□ -0.17
CHD3-216ENST00000573936 ABCC12Q96J65 1359 aa13.98□□□□□ -0.17
CHD3-216ENST00000573936 KIF16BQ96L93 1317 aa13.98□□□□□ -0.17
CHD3-216ENST00000573936 ZC3H4Q9UPT8 1303 aaKnown RBP13.98□□□□□ -0.17
CHD3-216ENST00000573936 F6X3S4 739 aa13.98□□□□□ -0.17
CHD3-216ENST00000573936 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
CHD3-216ENST00000573936 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
CHD3-216ENST00000573936 LMNB1P20700 586 aa13.98□□□□□ -0.17
CHD3-216ENST00000573936 CRY2Q49AN0 593 aa13.98□□□□□ -0.17
CHD3-216ENST00000573936 BEND3Q5T5X7 828 aa13.98□□□□□ -0.17
CHD3-216ENST00000573936 RPGRQ92834 1020 aaKnown RBP13.98□□□□□ -0.17
CHD3-216ENST00000573936 RBM17Q96I25 401 aaKnown RBP13.98□□□□□ -0.17
CHD3-216ENST00000573936 API5Q9BZZ5 524 aaKnown RBP13.98□□□□□ -0.17
CHD3-216ENST00000573936 CACNA1SQ13698 1873 aa13.97□□□□□ -0.17
CHD3-216ENST00000573936 CCDC88AQ3V6T2 1871 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms