RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 PRELPP51888 382 aa27.64■■■□□ 2.02
HCFC1R1-205ENST00000573842 CCDC93Q567U6 631 aa27.64■■■□□ 2.02
HCFC1R1-205ENST00000573842 RPGRQ92834 1020 aaKnown RBP27.64■■■□□ 2.02
HCFC1R1-205ENST00000573842 NMRK2Q9NPI5 230 aa27.64■■■□□ 2.02
HCFC1R1-205ENST00000573842 CCDC27Q2M243 656 aa27.63■■■□□ 2.01
HCFC1R1-205ENST00000573842 UTP14AQ9BVJ6 771 aaKnown RBP27.63■■■□□ 2.01
HCFC1R1-205ENST00000573842 HYPKQ9NX55 129 aa27.63■■■□□ 2.01
HCFC1R1-205ENST00000573842 PLBD2Q8NHP8 589 aa27.6■■■□□ 2.01
HCFC1R1-205ENST00000573842 C7orf43Q8WVR3 580 aa27.6■■■□□ 2.01
HCFC1R1-205ENST00000573842 DDX60Q8IY21 1712 aaKnown RBP27.6■■■□□ 2.01
HCFC1R1-205ENST00000573842 TCIRG1Q13488 830 aa27.59■■■□□ 2.01
HCFC1R1-205ENST00000573842 NLRP10Q86W26 655 aa27.59■■■□□ 2.01
HCFC1R1-205ENST00000573842 C16orf71Q8IYS4 520 aaPredicted RBP27.59■■■□□ 2.01
HCFC1R1-205ENST00000573842 CHMP4AQ9BY43 222 aa27.59■■■□□ 2.01
HCFC1R1-205ENST00000573842 ELL2O00472 640 aaPredicted RBP27.58■■■□□ 2.01
HCFC1R1-205ENST00000573842 NCBP3Q53F19 620 aaKnown RBP27.58■■■□□ 2.01
HCFC1R1-205ENST00000573842 WWC1Q8IX03 1113 aa27.58■■■□□ 2.01
HCFC1R1-205ENST00000573842 WDR90Q96KV7 1748 aa27.58■■■□□ 2.01
HCFC1R1-205ENST00000573842 TOMM70O94826 608 aa27.57■■■□□ 2
HCFC1R1-205ENST00000573842 ANKRD13DQ6ZTN6 518 aa27.57■■■□□ 2
HCFC1R1-205ENST00000573842 RTKN2Q8IZC4 609 aa27.57■■■□□ 2
HCFC1R1-205ENST00000573842 RBM17Q96I25 401 aaKnown RBP27.57■■■□□ 2
HCFC1R1-205ENST00000573842 NLRP3Q96P20 1036 aa27.57■■■□□ 2
HCFC1R1-205ENST00000573842 GLTPD2A6NH11 291 aa27.56■■■□□ 2
HCFC1R1-205ENST00000573842 HOXA10P31260 410 aaPredicted RBP27.56■■■□□ 2
HCFC1R1-205ENST00000573842 FKBP4Q02790 459 aaKnown RBP eCLIP27.55■■■□□ 2
HCFC1R1-205ENST00000573842 GOLGA2Q08379 1002 aa27.55■■■□□ 2
HCFC1R1-205ENST00000573842 C8orf58Q8NAV2 365 aa27.55■■■□□ 2
HCFC1R1-205ENST00000573842 TRMT112Q9UI30 125 aaKnown RBP27.55■■■□□ 2
HCFC1R1-205ENST00000573842 SH3TC1Q8TE82 1336 aa27.55■■■□□ 2
HCFC1R1-205ENST00000573842 CACNA1FO60840 1977 aa27.54■■■□□ 2
HCFC1R1-205ENST00000573842 IL16Q14005 1332 aa27.54■■■□□ 2
HCFC1R1-205ENST00000573842 SLC10A5Q5PT55 438 aa27.54■■■□□ 2
HCFC1R1-205ENST00000573842 TSR2Q969E8 191 aaKnown RBP27.54■■■□□ 2
HCFC1R1-205ENST00000573842 CCDC30Q5VVM6 783 aa27.53■■■□□ 2
HCFC1R1-205ENST00000573842 DPY19L2Q6NUT2 758 aa27.53■■■□□ 2
HCFC1R1-205ENST00000573842 OLFM4Q6UX06 510 aa27.53■■■□□ 2
HCFC1R1-205ENST00000573842 C3orf67Q6ZVT6 689 aa27.53■■■□□ 2
HCFC1R1-205ENST00000573842 CRAMP1Q96RY5 1269 aa27.53■■■□□ 2
HCFC1R1-205ENST00000573842 RRAGCQ9HB90 399 aa27.53■■■□□ 2
HCFC1R1-205ENST00000573842 SNED1Q8TER0 1413 aa27.52■■■□□ 2
HCFC1R1-205ENST00000573842 CC2D2BQ6DHV5 1058 aa27.52■■■□□ 2
HCFC1R1-205ENST00000573842 PPEF1O14829 653 aaPredicted RBP27.51■■□□□ 1.99
HCFC1R1-205ENST00000573842 HSPA6P17066 643 aa27.51■■□□□ 1.99
HCFC1R1-205ENST00000573842 RIC3Q7Z5B4 369 aa27.51■■□□□ 1.99
HCFC1R1-205ENST00000573842 RBM46Q8TBY0 533 aaKnown RBP27.51■■□□□ 1.99
HCFC1R1-205ENST00000573842 ISCA1Q9BUE6 129 aa27.5■■□□□ 1.99
HCFC1R1-205ENST00000573842 TAF1P21675 1872 aa27.49■■□□□ 1.99
HCFC1R1-205ENST00000573842 GRIPAP1Q4V328 841 aa27.49■■□□□ 1.99
HCFC1R1-205ENST00000573842 FAM9BQ8IZU0 186 aa27.49■■□□□ 1.99
HCFC1R1-205ENST00000573842 PHAXQ9H814 394 aaKnown RBP27.49■■□□□ 1.99
HCFC1R1-205ENST00000573842 ZNF277Q9NRM2 450 aaPredicted RBP27.49■■□□□ 1.99
HCFC1R1-205ENST00000573842 ATP5J2-PTCD1G3V325 749 aa27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 DDX58O95786 925 aaKnown RBP27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 HCLS1P14317 486 aaPredicted RBP27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 TSPYL6Q8N831 410 aa27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 PSMD1Q99460 953 aa27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 TMX4Q9H1E5 349 aaPredicted RBP27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 SCN4AP35499 1836 aa27.48■■□□□ 1.99
HCFC1R1-205ENST00000573842 ABCC4O15439 1325 aa27.47■■□□□ 1.99
HCFC1R1-205ENST00000573842 VEGFAP15692 232 aaPredicted RBP27.47■■□□□ 1.99
HCFC1R1-205ENST00000573842 STK31Q9BXU1 1019 aa27.47■■□□□ 1.99
HCFC1R1-205ENST00000573842 SALL2Q9Y467 1007 aaPredicted RBP27.47■■□□□ 1.99
HCFC1R1-205ENST00000573842 CEP350Q5VT06 3117 aa27.46■■□□□ 1.99
HCFC1R1-205ENST00000573842 IARSP41252 1262 aaKnown RBP27.46■■□□□ 1.99
HCFC1R1-205ENST00000573842 TWISTNBQ3B726 338 aaPredicted RBP27.46■■□□□ 1.99
HCFC1R1-205ENST00000573842 LRRC37AA6NMS7 1700 aa27.46■■□□□ 1.99
HCFC1R1-205ENST00000573842 FANCIQ9NVI1 1328 aa27.45■■□□□ 1.99
HCFC1R1-205ENST00000573842 WDR63Q8IWG1 891 aa27.45■■□□□ 1.98
HCFC1R1-205ENST00000573842 SYNE4Q8N205 404 aa27.45■■□□□ 1.98
HCFC1R1-205ENST00000573842 ZNF428Q96B54 188 aa27.45■■□□□ 1.98
HCFC1R1-205ENST00000573842 TCERG1O14776 1098 aaKnown RBP27.44■■□□□ 1.98
HCFC1R1-205ENST00000573842 FSTL1Q12841 308 aa27.44■■□□□ 1.98
HCFC1R1-205ENST00000573842 TRIM28Q13263 835 aaKnown RBP27.44■■□□□ 1.98
HCFC1R1-205ENST00000573842 DDX46Q7L014 1031 aaKnown RBP27.44■■□□□ 1.98
HCFC1R1-205ENST00000573842 FAM89AQ96GI7 184 aa27.43■■□□□ 1.98
HCFC1R1-205ENST00000573842 MYH3P11055 1940 aa27.43■■□□□ 1.98
HCFC1R1-205ENST00000573842 SMC1BQ8NDV3 1235 aa27.42■■□□□ 1.98
HCFC1R1-205ENST00000573842 MYD88Q99836 296 aa27.42■■□□□ 1.98
HCFC1R1-205ENST00000573842 ATP6V0A2Q9Y487 856 aa27.42■■□□□ 1.98
HCFC1R1-205ENST00000573842 BBOX1O75936 387 aa27.4■■□□□ 1.98
HCFC1R1-205ENST00000573842 DDNO94850 711 aaPredicted RBP27.4■■□□□ 1.98
HCFC1R1-205ENST00000573842 GRAPQ13588 217 aa27.4■■□□□ 1.98
HCFC1R1-205ENST00000573842 GRAPLQ8TC17 118 aaPredicted RBP27.4■■□□□ 1.98
HCFC1R1-205ENST00000573842 JDP2Q8WYK2 163 aa27.4■■□□□ 1.98
HCFC1R1-205ENST00000573842 HSP90B1P14625 803 aaKnown RBP27.39■■□□□ 1.98
HCFC1R1-205ENST00000573842 APLP1P51693 650 aa27.39■■□□□ 1.98
HCFC1R1-205ENST00000573842 RTL5Q5HYW3 569 aaPredicted RBP27.39■■□□□ 1.98
HCFC1R1-205ENST00000573842 CCDC191Q8NCU4 936 aa27.39■■□□□ 1.98
HCFC1R1-205ENST00000573842 COL4A5P29400 1685 aa27.39■■□□□ 1.97
HCFC1R1-205ENST00000573842 ZNF541Q9H0D2 1346 aa27.39■■□□□ 1.97
HCFC1R1-205ENST00000573842 IRS4O14654 1257 aaPredicted RBP27.38■■□□□ 1.97
HCFC1R1-205ENST00000573842 TMC4Q7Z404 712 aa27.38■■□□□ 1.97
HCFC1R1-205ENST00000573842 ZBTB38Q8NAP3 1195 aaPredicted RBP27.38■■□□□ 1.97
HCFC1R1-205ENST00000573842 METTL22Q9BUU2 404 aaPredicted RBP27.38■■□□□ 1.97
HCFC1R1-205ENST00000573842 MAP3K2Q9Y2U5 619 aa27.38■■□□□ 1.97
HCFC1R1-205ENST00000573842 SLC51AQ86UW1 340 aa27.37■■□□□ 1.97
HCFC1R1-205ENST00000573842 CWC25Q9NXE8 425 aaPredicted RBP27.37■■□□□ 1.97
HCFC1R1-205ENST00000573842 IQCA1LA6NCM1 817 aa27.36■■□□□ 1.97
HCFC1R1-205ENST00000573842 POTECB2RU33 542 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms