RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 ZNF622Q969S3 477 aaKnown RBP eCLIP27.11■■□□□ 1.93
ABR-221ENST00000573559 PDZRN3Q9UPQ7 1066 aa27.11■■□□□ 1.93
ABR-221ENST00000573559 CACNA1SQ13698 1873 aa27.1■■□□□ 1.93
ABR-221ENST00000573559 CHD4Q14839 1912 aa27.1■■□□□ 1.93
ABR-221ENST00000573559 FLIIQ13045 1269 aa27.09■■□□□ 1.93
ABR-221ENST00000573559 MYD88Q99836 296 aa27.09■■□□□ 1.93
ABR-221ENST00000573559 MAP3K2Q9Y2U5 619 aa27.09■■□□□ 1.93
ABR-221ENST00000573559 ISCA1Q9BUE6 129 aa27.08■■□□□ 1.93
ABR-221ENST00000573559 TRMT112Q9UI30 125 aaKnown RBP27.08■■□□□ 1.93
ABR-221ENST00000573559 PI4KAP2A4QPH2 592 aa27.07■■□□□ 1.92
ABR-221ENST00000573559 FKBP5Q13451 457 aaPredicted RBP27.07■■□□□ 1.92
ABR-221ENST00000573559 KSR2Q6VAB6 950 aa27.07■■□□□ 1.92
ABR-221ENST00000573559 TTLL6Q8N841 843 aa27.07■■□□□ 1.92
ABR-221ENST00000573559 PI4KAP1Q8N8J0 262 aa27.07■■□□□ 1.92
ABR-221ENST00000573559 ADCY9O60503 1353 aa27.07■■□□□ 1.92
ABR-221ENST00000573559 SRGNP10124 158 aa27.06■■□□□ 1.92
ABR-221ENST00000573559 METTL22Q9BUU2 404 aaPredicted RBP27.06■■□□□ 1.92
ABR-221ENST00000573559 RIC1Q4ADV7 1423 aa27.06■■□□□ 1.92
ABR-221ENST00000573559 TRMT2AQ8IZ69 625 aaKnown RBP27.05■■□□□ 1.92
ABR-221ENST00000573559 MASTLQ96GX5 879 aa27.05■■□□□ 1.92
ABR-221ENST00000573559 RNF123Q5XPI4 1314 aa27.05■■□□□ 1.92
ABR-221ENST00000573559 UTRNP46939 3433 aa27.05■■□□□ 1.92
ABR-221ENST00000573559 STYK1Q6J9G0 422 aa27.04■■□□□ 1.92
ABR-221ENST00000573559 SH3TC1Q8TE82 1336 aa27.04■■□□□ 1.92
ABR-221ENST00000573559 NPR1P16066 1061 aa27.03■■□□□ 1.92
ABR-221ENST00000573559 KLRG2A4D1S0 409 aaPredicted RBP27.02■■□□□ 1.92
ABR-221ENST00000573559 NEXNQ0ZGT2 675 aa27.02■■□□□ 1.92
ABR-221ENST00000573559 SYNE4Q8N205 404 aa27.02■■□□□ 1.92
ABR-221ENST00000573559 CNKSR1Q969H4 720 aa27.02■■□□□ 1.92
ABR-221ENST00000573559 YY1P25490 414 aa27.01■■□□□ 1.91
ABR-221ENST00000573559 TRIM28Q13263 835 aaKnown RBP27.01■■□□□ 1.91
ABR-221ENST00000573559 RTL5Q5HYW3 569 aaPredicted RBP27.01■■□□□ 1.91
ABR-221ENST00000573559 ARHGAP27Q6ZUM4 889 aa27.01■■□□□ 1.91
ABR-221ENST00000573559 ZNF219Q9P2Y4 722 aaPredicted RBP27.01■■□□□ 1.91
ABR-221ENST00000573559 LAMB2P55268 1798 aa27.01■■□□□ 1.91
ABR-221ENST00000573559 SLX4Q8IY92 1834 aa27■■□□□ 1.91
ABR-221ENST00000573559 DDX60Q8IY21 1712 aaKnown RBP27■■□□□ 1.91
ABR-221ENST00000573559 HCLS1P14317 486 aaPredicted RBP27■■□□□ 1.91
ABR-221ENST00000573559 RPGRQ92834 1020 aaKnown RBP27■■□□□ 1.91
ABR-221ENST00000573559 FAM89AQ96GI7 184 aa27■■□□□ 1.91
ABR-221ENST00000573559 NLRP3Q96P20 1036 aa27■■□□□ 1.91
ABR-221ENST00000573559 CWC25Q9NXE8 425 aaPredicted RBP27■■□□□ 1.91
ABR-221ENST00000573559 PRPF40BQ6NWY9 871 aaKnown RBP26.99■■□□□ 1.91
ABR-221ENST00000573559 CCDC191Q8NCU4 936 aa26.99■■□□□ 1.91
ABR-221ENST00000573559 DNAAF4Q8WXU2 420 aa26.99■■□□□ 1.91
ABR-221ENST00000573559 BCL2L13Q9BXK5 485 aa26.99■■□□□ 1.91
ABR-221ENST00000573559 CRY2Q49AN0 593 aa26.98■■□□□ 1.91
ABR-221ENST00000573559 SLC10A5Q5PT55 438 aa26.98■■□□□ 1.91
ABR-221ENST00000573559 C3orf67Q6ZVT6 689 aa26.98■■□□□ 1.91
ABR-221ENST00000573559 ZBED9Q6R2W3 1325 aa26.97■■□□□ 1.91
ABR-221ENST00000573559 SSH1Q8WYL5 1049 aa26.97■■□□□ 1.91
ABR-221ENST00000573559 F6X3S4 739 aa26.96■■□□□ 1.91
ABR-221ENST00000573559 IGKV5-2P06315 115 aa26.96■■□□□ 1.91
ABR-221ENST00000573559 CWF19L2Q2TBE0 894 aaKnown RBP26.96■■□□□ 1.91
ABR-221ENST00000573559 MRPL50Q8N5N7 158 aaKnown RBP26.96■■□□□ 1.91
ABR-221ENST00000573559 C21orf2O43822 256 aa26.95■■□□□ 1.9
ABR-221ENST00000573559 CT47B1P0C2W7 299 aaPredicted RBP26.95■■□□□ 1.9
ABR-221ENST00000573559 ZBTB38Q8NAP3 1195 aaPredicted RBP26.95■■□□□ 1.9
ABR-221ENST00000573559 SMC4Q9NTJ3 1288 aa26.95■■□□□ 1.9
ABR-221ENST00000573559 IRS4O14654 1257 aaPredicted RBP26.94■■□□□ 1.9
ABR-221ENST00000573559 ALDH1B1P30837 517 aa26.94■■□□□ 1.9
ABR-221ENST00000573559 JARID2Q92833 1246 aaPredicted RBP26.94■■□□□ 1.9
ABR-221ENST00000573559 RBM17Q96I25 401 aaKnown RBP26.94■■□□□ 1.9
ABR-221ENST00000573559 NEURL1BA8MQ27 555 aa26.93■■□□□ 1.9
ABR-221ENST00000573559 PCCAP05165 728 aaPredicted RBP26.93■■□□□ 1.9
ABR-221ENST00000573559 ALDH1L2Q3SY69 923 aa26.93■■□□□ 1.9
ABR-221ENST00000573559 HOXA10P31260 410 aaPredicted RBP26.91■■□□□ 1.9
ABR-221ENST00000573559 RASSF7Q02833 373 aa26.91■■□□□ 1.9
ABR-221ENST00000573559 LINS1Q8NG48 757 aa26.91■■□□□ 1.9
ABR-221ENST00000573559 SLC4A10Q6U841 1118 aa26.9■■□□□ 1.9
ABR-221ENST00000573559 HSP90B1P14625 803 aaKnown RBP26.89■■□□□ 1.9
ABR-221ENST00000573559 SOGA3Q5TF21 947 aa26.89■■□□□ 1.9
ABR-221ENST00000573559 CRAMP1Q96RY5 1269 aa26.89■■□□□ 1.9
ABR-221ENST00000573559 FER1L6Q2WGJ9 1857 aa26.89■■□□□ 1.89
ABR-221ENST00000573559 ABCC4O15439 1325 aa26.89■■□□□ 1.89
ABR-221ENST00000573559 PTPRCP08575 1304 aa26.89■■□□□ 1.89
ABR-221ENST00000573559 DDX46Q7L014 1031 aaKnown RBP26.88■■□□□ 1.89
ABR-221ENST00000573559 PPEF1O14829 653 aaPredicted RBP26.87■■□□□ 1.89
ABR-221ENST00000573559 GCKRQ14397 625 aa26.87■■□□□ 1.89
ABR-221ENST00000573559 CCDC93Q567U6 631 aa26.87■■□□□ 1.89
ABR-221ENST00000573559 BEND3Q5T5X7 828 aa26.87■■□□□ 1.89
ABR-221ENST00000573559 UBE3BQ7Z3V4 1068 aa26.87■■□□□ 1.89
ABR-221ENST00000573559 SBF1O95248 1867 aa26.87■■□□□ 1.89
ABR-221ENST00000573559 TAF1P21675 1872 aa26.86■■□□□ 1.89
ABR-221ENST00000573559 OLFM4Q6UX06 510 aa26.86■■□□□ 1.89
ABR-221ENST00000573559 MYH3P11055 1940 aa26.86■■□□□ 1.89
ABR-221ENST00000573559 CDHR2Q9BYE9 1310 aa26.86■■□□□ 1.89
ABR-221ENST00000573559 NFKBIEO00221 500 aa26.85■■□□□ 1.89
ABR-221ENST00000573559 PDE8AO60658 829 aa26.85■■□□□ 1.89
ABR-221ENST00000573559 RARSP54136 660 aaKnown RBP26.85■■□□□ 1.89
ABR-221ENST00000573559 C7orf43Q8WVR3 580 aa26.85■■□□□ 1.89
ABR-221ENST00000573559 CCDC88AQ3V6T2 1871 aa26.85■■□□□ 1.89
ABR-221ENST00000573559 SF3B3Q15393 1217 aaKnown RBP26.84■■□□□ 1.89
ABR-221ENST00000573559 C9orf131Q5VYM1 1079 aa26.84■■□□□ 1.89
ABR-221ENST00000573559 RNF181Q9P0P0 153 aa26.84■■□□□ 1.89
ABR-221ENST00000573559 GRAPQ13588 217 aa26.83■■□□□ 1.89
ABR-221ENST00000573559 GRAPLQ8TC17 118 aaPredicted RBP26.83■■□□□ 1.89
ABR-221ENST00000573559 SRCIN1Q9C0H9 1055 aa26.83■■□□□ 1.89
ABR-221ENST00000573559 TAOK3Q9H2K8 898 aa26.83■■□□□ 1.89
ABR-221ENST00000573559 H7C1W4 665 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms