RNA–Protein interactions for RNA: ENST00000573391.1

STRA6-215, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 4

Gene STRA6, Length 566 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-215ENST00000573391 SLC51AQ86UW1 340 aa25.62■■□□□ 1.69
STRA6-215ENST00000573391 MRS2Q9HD23 443 aa25.62■■□□□ 1.69
STRA6-215ENST00000573391 GNAI1P63096 354 aa25.61■■□□□ 1.69
STRA6-215ENST00000573391 PARP10Q53GL7 1025 aa25.61■■□□□ 1.69
STRA6-215ENST00000573391 RRAGCQ9HB90 399 aa25.61■■□□□ 1.69
STRA6-215ENST00000573391 CCDC93Q567U6 631 aa25.6■■□□□ 1.69
STRA6-215ENST00000573391 PPP1R42Q7Z4L9 355 aa25.6■■□□□ 1.69
STRA6-215ENST00000573391 TOMM70O94826 608 aa25.59■■□□□ 1.69
STRA6-215ENST00000573391 SOGA3Q5TF21 947 aa25.59■■□□□ 1.69
STRA6-215ENST00000573391 ZNF428Q96B54 188 aa25.59■■□□□ 1.69
STRA6-215ENST00000573391 DBF4Q9UBU7 674 aaPredicted RBP25.59■■□□□ 1.69
STRA6-215ENST00000573391 GLTPD2A6NH11 291 aa25.58■■□□□ 1.69
STRA6-215ENST00000573391 ELL2O00472 640 aaPredicted RBP25.58■■□□□ 1.69
STRA6-215ENST00000573391 CALD1Q05682 793 aaKnown RBP25.58■■□□□ 1.69
STRA6-215ENST00000573391 NLRP10Q86W26 655 aa25.58■■□□□ 1.69
STRA6-215ENST00000573391 HSPA6P17066 643 aa25.57■■□□□ 1.68
STRA6-215ENST00000573391 ALDH1B1P30837 517 aa25.57■■□□□ 1.68
STRA6-215ENST00000573391 TCIRG1Q13488 830 aa25.57■■□□□ 1.68
STRA6-215ENST00000573391 C8orf58Q8NAV2 365 aa25.57■■□□□ 1.68
STRA6-215ENST00000573391 RPGRQ92834 1020 aaKnown RBP25.57■■□□□ 1.68
STRA6-215ENST00000573391 UTP14AQ9BVJ6 771 aaKnown RBP25.57■■□□□ 1.68
STRA6-215ENST00000573391 COL4A5P29400 1685 aa25.56■■□□□ 1.68
STRA6-215ENST00000573391 HSP90AB3PQ58FF7 597 aa25.56■■□□□ 1.68
STRA6-215ENST00000573391 SYNE4Q8N205 404 aa25.56■■□□□ 1.68
STRA6-215ENST00000573391 HOXA10P31260 410 aaPredicted RBP25.55■■□□□ 1.68
STRA6-215ENST00000573391 FKBP4Q02790 459 aaKnown RBP eCLIP25.55■■□□□ 1.68
STRA6-215ENST00000573391 PLBD2Q8NHP8 589 aa25.55■■□□□ 1.68
STRA6-215ENST00000573391 TSR2Q969E8 191 aaKnown RBP25.55■■□□□ 1.68
STRA6-215ENST00000573391 COL4A1P02462 1669 aa25.55■■□□□ 1.68
STRA6-215ENST00000573391 ZNF277Q9NRM2 450 aaPredicted RBP25.54■■□□□ 1.68
STRA6-215ENST00000573391 LRRC37AA6NMS7 1700 aa25.54■■□□□ 1.68
STRA6-215ENST00000573391 CCDC27Q2M243 656 aa25.53■■□□□ 1.68
STRA6-215ENST00000573391 ANKRD13DQ6ZTN6 518 aa25.53■■□□□ 1.68
STRA6-215ENST00000573391 WWC1Q8IX03 1113 aa25.53■■□□□ 1.68
STRA6-215ENST00000573391 TSPYL6Q8N831 410 aa25.53■■□□□ 1.68
STRA6-215ENST00000573391 RBM46Q8TBY0 533 aaKnown RBP25.53■■□□□ 1.68
STRA6-215ENST00000573391 PHAXQ9H814 394 aaKnown RBP25.53■■□□□ 1.68
STRA6-215ENST00000573391 HYPKQ9NX55 129 aa25.53■■□□□ 1.68
STRA6-215ENST00000573391 RNF123Q5XPI4 1314 aa25.53■■□□□ 1.68
STRA6-215ENST00000573391 SCN4AP35499 1836 aa25.52■■□□□ 1.68
STRA6-215ENST00000573391 POTECB2RU33 542 aa25.52■■□□□ 1.68
STRA6-215ENST00000573391 SLC10A5Q5PT55 438 aa25.52■■□□□ 1.68
STRA6-215ENST00000573391 C16orf71Q8IYS4 520 aaPredicted RBP25.52■■□□□ 1.68
STRA6-215ENST00000573391 HCLS1P14317 486 aaPredicted RBP25.51■■□□□ 1.67
STRA6-215ENST00000573391 NLRP3Q96P20 1036 aa25.51■■□□□ 1.67
STRA6-215ENST00000573391 ISCA1Q9BUE6 129 aa25.51■■□□□ 1.67
STRA6-215ENST00000573391 TRMT112Q9UI30 125 aaKnown RBP25.51■■□□□ 1.67
STRA6-215ENST00000573391 ATP5J2-PTCD1G3V325 749 aa25.5■■□□□ 1.67
STRA6-215ENST00000573391 PPEF1O14829 653 aaPredicted RBP25.5■■□□□ 1.67
STRA6-215ENST00000573391 ABCC4O15439 1325 aa25.5■■□□□ 1.67
STRA6-215ENST00000573391 RTKN2Q8IZC4 609 aa25.5■■□□□ 1.67
STRA6-215ENST00000573391 RBM17Q96I25 401 aaKnown RBP25.5■■□□□ 1.67
STRA6-215ENST00000573391 CRAMP1Q96RY5 1269 aa25.5■■□□□ 1.67
STRA6-215ENST00000573391 SH3TC1Q8TE82 1336 aa25.49■■□□□ 1.67
STRA6-215ENST00000573391 TCERG1O14776 1098 aaKnown RBP25.49■■□□□ 1.67
STRA6-215ENST00000573391 ZNF541Q9H0D2 1346 aa25.48■■□□□ 1.67
STRA6-215ENST00000573391 CACNA1FO60840 1977 aa25.48■■□□□ 1.67
STRA6-215ENST00000573391 DDNO94850 711 aaPredicted RBP25.48■■□□□ 1.67
STRA6-215ENST00000573391 VEGFAP15692 232 aaPredicted RBP25.47■■□□□ 1.67
STRA6-215ENST00000573391 DPY19L2Q6NUT2 758 aa25.47■■□□□ 1.67
STRA6-215ENST00000573391 MYH3P11055 1940 aa25.46■■□□□ 1.67
STRA6-215ENST00000573391 IARSP41252 1262 aaKnown RBP25.46■■□□□ 1.67
STRA6-215ENST00000573391 PSMD1Q99460 953 aa25.46■■□□□ 1.67
STRA6-215ENST00000573391 SALL2Q9Y467 1007 aaPredicted RBP25.46■■□□□ 1.67
STRA6-215ENST00000573391 DUOX1Q9NRD9 1551 aa25.45■■□□□ 1.66
STRA6-215ENST00000573391 IL16Q14005 1332 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 LTBP1Q14766 1721 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 GOLGA2Q08379 1002 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 RIC3Q7Z5B4 369 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 FAM89AQ96GI7 184 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 SPEF2Q9C093 1822 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 ADAMTSL1Q8N6G6 1762 aa25.44■■□□□ 1.66
STRA6-215ENST00000573391 FSTL1Q12841 308 aa25.43■■□□□ 1.66
STRA6-215ENST00000573391 NCBP3Q53F19 620 aaKnown RBP25.43■■□□□ 1.66
STRA6-215ENST00000573391 RTL5Q5HYW3 569 aaPredicted RBP25.43■■□□□ 1.66
STRA6-215ENST00000573391 CCDC30Q5VVM6 783 aa25.43■■□□□ 1.66
STRA6-215ENST00000573391 CC2D2BQ6DHV5 1058 aa25.43■■□□□ 1.66
STRA6-215ENST00000573391 FANCIQ9NVI1 1328 aa25.42■■□□□ 1.66
STRA6-215ENST00000573391 MYD88Q99836 296 aa25.42■■□□□ 1.66
STRA6-215ENST00000573391 FAM9BQ8IZU0 186 aa25.41■■□□□ 1.66
STRA6-215ENST00000573391 ATP6V0A2Q9Y487 856 aa25.41■■□□□ 1.66
STRA6-215ENST00000573391 APLP1P51693 650 aa25.4■■□□□ 1.66
STRA6-215ENST00000573391 HTRA3P83110 453 aa25.4■■□□□ 1.66
STRA6-215ENST00000573391 TRIM28Q13263 835 aaKnown RBP25.4■■□□□ 1.66
STRA6-215ENST00000573391 TWISTNBQ3B726 338 aaPredicted RBP25.4■■□□□ 1.66
STRA6-215ENST00000573391 SMC1BQ8NDV3 1235 aa25.4■■□□□ 1.66
STRA6-215ENST00000573391 FZD9O00144 591 aa25.39■■□□□ 1.66
STRA6-215ENST00000573391 POTEIP0CG38 1075 aa25.39■■□□□ 1.66
STRA6-215ENST00000573391 POTEJP0CG39 1038 aa25.39■■□□□ 1.66
STRA6-215ENST00000573391 GRAPQ13588 217 aa25.38■■□□□ 1.65
STRA6-215ENST00000573391 DDX46Q7L014 1031 aaKnown RBP25.38■■□□□ 1.65
STRA6-215ENST00000573391 GRAPLQ8TC17 118 aaPredicted RBP25.38■■□□□ 1.65
STRA6-215ENST00000573391 L3MBTL3Q96JM7 780 aaPredicted RBP25.38■■□□□ 1.65
STRA6-215ENST00000573391 G2E3Q7L622 706 aa25.37■■□□□ 1.65
STRA6-215ENST00000573391 SPINK5Q9NQ38 1064 aaPredicted RBP25.37■■□□□ 1.65
STRA6-215ENST00000573391 IRS4O14654 1257 aaPredicted RBP25.36■■□□□ 1.65
STRA6-215ENST00000573391 METTL22Q9BUU2 404 aaPredicted RBP25.36■■□□□ 1.65
STRA6-215ENST00000573391 MAP3K2Q9Y2U5 619 aa25.36■■□□□ 1.65
STRA6-215ENST00000573391 SF3B3Q15393 1217 aaKnown RBP25.35■■□□□ 1.65
STRA6-215ENST00000573391 GRIPAP1Q4V328 841 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms