RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TAOK3Q9H2K8 898 aa22.56■■□□□ 1.2
SMG6-212ENST00000573153 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
SMG6-212ENST00000573153 TOMM70O94826 608 aa22.55■■□□□ 1.2
SMG6-212ENST00000573153 AIMP1Q12904 312 aaKnown RBP22.55■■□□□ 1.2
SMG6-212ENST00000573153 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
SMG6-212ENST00000573153 C8orf58Q8NAV2 365 aa22.55■■□□□ 1.2
SMG6-212ENST00000573153 DDX60Q8IY21 1712 aaKnown RBP22.54■■□□□ 1.2
SMG6-212ENST00000573153 HSPA6P17066 643 aa22.54■■□□□ 1.2
SMG6-212ENST00000573153 GNAI1P63096 354 aa22.54■■□□□ 1.2
SMG6-212ENST00000573153 TCIRG1Q13488 830 aa22.54■■□□□ 1.2
SMG6-212ENST00000573153 SYNE4Q8N205 404 aa22.54■■□□□ 1.2
SMG6-212ENST00000573153 COL4A1P02462 1669 aa22.54■■□□□ 1.2
SMG6-212ENST00000573153 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
SMG6-212ENST00000573153 ANP32CO43423 234 aa22.53■■□□□ 1.2
SMG6-212ENST00000573153 CCDC93Q567U6 631 aa22.53■■□□□ 1.2
SMG6-212ENST00000573153 SOGA3Q5TF21 947 aa22.53■■□□□ 1.2
SMG6-212ENST00000573153 RRAGCQ9HB90 399 aa22.53■■□□□ 1.2
SMG6-212ENST00000573153 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
SMG6-212ENST00000573153 WWC1Q8IX03 1113 aa22.52■■□□□ 1.2
SMG6-212ENST00000573153 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
SMG6-212ENST00000573153 PLBD2Q8NHP8 589 aa22.52■■□□□ 1.2
SMG6-212ENST00000573153 ISCA1Q9BUE6 129 aa22.52■■□□□ 1.2
SMG6-212ENST00000573153 RNF123Q5XPI4 1314 aa22.52■■□□□ 1.2
SMG6-212ENST00000573153 GTF2E1P29083 439 aaPredicted RBP22.51■■□□□ 1.19
SMG6-212ENST00000573153 FKBP4Q02790 459 aaKnown RBP eCLIP22.51■■□□□ 1.19
SMG6-212ENST00000573153 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
SMG6-212ENST00000573153 PPP1R42Q7Z4L9 355 aa22.51■■□□□ 1.19
SMG6-212ENST00000573153 UTP14AQ9BVJ6 771 aaKnown RBP22.51■■□□□ 1.19
SMG6-212ENST00000573153 MRS2Q9HD23 443 aa22.51■■□□□ 1.19
SMG6-212ENST00000573153 ALDH1B1P30837 517 aa22.5■■□□□ 1.19
SMG6-212ENST00000573153 HSP90AB3PQ58FF7 597 aa22.5■■□□□ 1.19
SMG6-212ENST00000573153 RBM46Q8TBY0 533 aaKnown RBP22.5■■□□□ 1.19
SMG6-212ENST00000573153 CRAMP1Q96RY5 1269 aa22.5■■□□□ 1.19
SMG6-212ENST00000573153 CALD1Q05682 793 aaKnown RBP22.49■■□□□ 1.19
SMG6-212ENST00000573153 PHAXQ9H814 394 aaKnown RBP22.49■■□□□ 1.19
SMG6-212ENST00000573153 ELL2O00472 640 aaPredicted RBP22.48■■□□□ 1.19
SMG6-212ENST00000573153 ANKRD13DQ6ZTN6 518 aa22.48■■□□□ 1.19
SMG6-212ENST00000573153 TSR2Q969E8 191 aaKnown RBP22.48■■□□□ 1.19
SMG6-212ENST00000573153 HYPKQ9NX55 129 aa22.48■■□□□ 1.19
SMG6-212ENST00000573153 PSMD1Q99460 953 aa22.47■■□□□ 1.19
SMG6-212ENST00000573153 ZNF277Q9NRM2 450 aaPredicted RBP22.47■■□□□ 1.19
SMG6-212ENST00000573153 ABCC4O15439 1325 aa22.47■■□□□ 1.19
SMG6-212ENST00000573153 LRRC37AA6NMS7 1700 aa22.46■■□□□ 1.19
SMG6-212ENST00000573153 ZNF541Q9H0D2 1346 aa22.46■■□□□ 1.19
SMG6-212ENST00000573153 DUOX1Q9NRD9 1551 aa22.46■■□□□ 1.19
SMG6-212ENST00000573153 TAF1P21675 1872 aa22.45■■□□□ 1.19
SMG6-212ENST00000573153 HCLS1P14317 486 aaPredicted RBP22.45■■□□□ 1.18
SMG6-212ENST00000573153 TRIM28Q13263 835 aaKnown RBP22.45■■□□□ 1.18
SMG6-212ENST00000573153 RTKN2Q8IZC4 609 aa22.45■■□□□ 1.18
SMG6-212ENST00000573153 RPGRQ92834 1020 aaKnown RBP22.45■■□□□ 1.18
SMG6-212ENST00000573153 ZNF428Q96B54 188 aa22.45■■□□□ 1.18
SMG6-212ENST00000573153 IL16Q14005 1332 aa22.45■■□□□ 1.18
SMG6-212ENST00000573153 DDNO94850 711 aaPredicted RBP22.44■■□□□ 1.18
SMG6-212ENST00000573153 SH3TC1Q8TE82 1336 aa22.44■■□□□ 1.18
SMG6-212ENST00000573153 NLRP3Q96P20 1036 aa22.44■■□□□ 1.18
SMG6-212ENST00000573153 ATP5J2-PTCD1G3V325 749 aa22.43■■□□□ 1.18
SMG6-212ENST00000573153 PPEF1O14829 653 aaPredicted RBP22.43■■□□□ 1.18
SMG6-212ENST00000573153 RBM17Q96I25 401 aaKnown RBP22.43■■□□□ 1.18
SMG6-212ENST00000573153 TRMT112Q9UI30 125 aaKnown RBP22.43■■□□□ 1.18
SMG6-212ENST00000573153 FZD9O00144 591 aa22.42■■□□□ 1.18
SMG6-212ENST00000573153 VEGFAP15692 232 aaPredicted RBP22.42■■□□□ 1.18
SMG6-212ENST00000573153 IARSP41252 1262 aaKnown RBP22.42■■□□□ 1.18
SMG6-212ENST00000573153 CC2D2BQ6DHV5 1058 aa22.42■■□□□ 1.18
SMG6-212ENST00000573153 L3MBTL3Q96JM7 780 aaPredicted RBP22.42■■□□□ 1.18
SMG6-212ENST00000573153 ADAMTSL1Q8N6G6 1762 aa22.42■■□□□ 1.18
SMG6-212ENST00000573153 FSTL1Q12841 308 aa22.41■■□□□ 1.18
SMG6-212ENST00000573153 SPINK5Q9NQ38 1064 aaPredicted RBP22.41■■□□□ 1.18
SMG6-212ENST00000573153 LTBP1Q14766 1721 aa22.4■■□□□ 1.18
SMG6-212ENST00000573153 FANCIQ9NVI1 1328 aa22.4■■□□□ 1.18
SMG6-212ENST00000573153 DNAJC5GQ8N7S2 189 aa22.4■■□□□ 1.18
SMG6-212ENST00000573153 FAM89AQ96GI7 184 aa22.4■■□□□ 1.18
SMG6-212ENST00000573153 ATP6V0A2Q9Y487 856 aa22.4■■□□□ 1.18
SMG6-212ENST00000573153 POTEIP0CG38 1075 aa22.39■■□□□ 1.17
SMG6-212ENST00000573153 POTEJP0CG39 1038 aa22.39■■□□□ 1.17
SMG6-212ENST00000573153 SCN4AP35499 1836 aa22.38■■□□□ 1.17
SMG6-212ENST00000573153 SF3B3Q15393 1217 aaKnown RBP22.38■■□□□ 1.17
SMG6-212ENST00000573153 DPY19L2Q6NUT2 758 aa22.38■■□□□ 1.17
SMG6-212ENST00000573153 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
SMG6-212ENST00000573153 GRAPQ13588 217 aa22.37■■□□□ 1.17
SMG6-212ENST00000573153 CCDC30Q5VVM6 783 aa22.37■■□□□ 1.17
SMG6-212ENST00000573153 G2E3Q7L622 706 aa22.37■■□□□ 1.17
SMG6-212ENST00000573153 GRAPLQ8TC17 118 aaPredicted RBP22.37■■□□□ 1.17
SMG6-212ENST00000573153 ZNF521Q96K83 1311 aa22.36■■□□□ 1.17
SMG6-212ENST00000573153 TCERG1O14776 1098 aaKnown RBP22.36■■□□□ 1.17
SMG6-212ENST00000573153 APLP1P51693 650 aa22.36■■□□□ 1.17
SMG6-212ENST00000573153 HTRA3P83110 453 aa22.36■■□□□ 1.17
SMG6-212ENST00000573153 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
SMG6-212ENST00000573153 TWISTNBQ3B726 338 aaPredicted RBP22.36■■□□□ 1.17
SMG6-212ENST00000573153 WDR63Q8IWG1 891 aa22.36■■□□□ 1.17
SMG6-212ENST00000573153 C16orf71Q8IYS4 520 aaPredicted RBP22.36■■□□□ 1.17
SMG6-212ENST00000573153 SMC1BQ8NDV3 1235 aa22.36■■□□□ 1.17
SMG6-212ENST00000573153 METTL22Q9BUU2 404 aaPredicted RBP22.36■■□□□ 1.17
SMG6-212ENST00000573153 IGKV5-2P06315 115 aa22.35■■□□□ 1.17
SMG6-212ENST00000573153 GRIPAP1Q4V328 841 aa22.35■■□□□ 1.17
SMG6-212ENST00000573153 RIC3Q7Z5B4 369 aa22.35■■□□□ 1.17
SMG6-212ENST00000573153 SP8Q8IXZ3 490 aa22.35■■□□□ 1.17
SMG6-212ENST00000573153 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
SMG6-212ENST00000573153 MYD88Q99836 296 aa22.35■■□□□ 1.17
SMG6-212ENST00000573153 BBOX1O75936 387 aa22.34■■□□□ 1.17
SMG6-212ENST00000573153 CHMP4AQ9BY43 222 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms