RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 CRY2Q49AN0 593 aa16.42■□□□□ 0.22
SMIM28-201ENST00000573100 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
SMIM28-201ENST00000573100 CST9Q5W186 159 aa16.42■□□□□ 0.22
SMIM28-201ENST00000573100 USP50Q70EL3 339 aaPredicted RBP16.42■□□□□ 0.22
SMIM28-201ENST00000573100 LARGE2Q8N3Y3 721 aa16.42■□□□□ 0.22
SMIM28-201ENST00000573100 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
SMIM28-201ENST00000573100 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
SMIM28-201ENST00000573100 TRAF5O00463 557 aa16.41■□□□□ 0.22
SMIM28-201ENST00000573100 MAP2K2P36507 400 aa16.41■□□□□ 0.22
SMIM28-201ENST00000573100 MCM10Q7L590 875 aa16.41■□□□□ 0.22
SMIM28-201ENST00000573100 NUTM1Q86Y26 1132 aa16.41■□□□□ 0.22
SMIM28-201ENST00000573100 RPGRQ92834 1020 aaKnown RBP16.41■□□□□ 0.22
SMIM28-201ENST00000573100 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
SMIM28-201ENST00000573100 HOXA10P31260 410 aaPredicted RBP16.4■□□□□ 0.22
SMIM28-201ENST00000573100 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
SMIM28-201ENST00000573100 SNED1Q8TER0 1413 aa16.39■□□□□ 0.21
SMIM28-201ENST00000573100 NGEFQ8N5V2 710 aa16.39■□□□□ 0.21
SMIM28-201ENST00000573100 CFAP53Q96M91 514 aa16.39■□□□□ 0.21
SMIM28-201ENST00000573100 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
SMIM28-201ENST00000573100 NUDCQ9Y266 331 aa16.39■□□□□ 0.21
SMIM28-201ENST00000573100 ERVV-1B6SEH8 477 aa16.38■□□□□ 0.21
SMIM28-201ENST00000573100 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
SMIM28-201ENST00000573100 AOC2O75106 756 aa16.38■□□□□ 0.21
SMIM28-201ENST00000573100 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
SMIM28-201ENST00000573100 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
SMIM28-201ENST00000573100 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
SMIM28-201ENST00000573100 CA12O43570 354 aa16.37■□□□□ 0.21
SMIM28-201ENST00000573100 HTATSF1O43719 755 aaKnown RBP16.37■□□□□ 0.21
SMIM28-201ENST00000573100 DCTN1Q14203 1278 aa16.37■□□□□ 0.21
SMIM28-201ENST00000573100 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
SMIM28-201ENST00000573100 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
SMIM28-201ENST00000573100 CRAMP1Q96RY5 1269 aa16.37■□□□□ 0.21
SMIM28-201ENST00000573100 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
SMIM28-201ENST00000573100 U2AF1L5P0DN76 240 aaPredicted RBP16.36■□□□□ 0.21
SMIM28-201ENST00000573100 U2AF1Q01081 240 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMIM28-201ENST00000573100 SAPCD2Q86UD0 394 aa16.36■□□□□ 0.21
SMIM28-201ENST00000573100 TMX4Q9H1E5 349 aaPredicted RBP16.36■□□□□ 0.21
SMIM28-201ENST00000573100 ADARB2Q9NS39 739 aaKnown RBP16.36■□□□□ 0.21
SMIM28-201ENST00000573100 MIS18AQ9NYP9 233 aa16.36■□□□□ 0.21
SMIM28-201ENST00000573100 GPRC5DQ9NZD1 345 aa16.36■□□□□ 0.21
SMIM28-201ENST00000573100 PCDH10Q9P2E7 1040 aa16.36■□□□□ 0.21
SMIM28-201ENST00000573100 COL4A5P29400 1685 aa16.36■□□□□ 0.21
SMIM28-201ENST00000573100 PPEF1O14829 653 aaPredicted RBP16.35■□□□□ 0.21
SMIM28-201ENST00000573100 PPIP5K2O43314 1243 aa16.35■□□□□ 0.21
SMIM28-201ENST00000573100 CELF2O95319 508 aaKnown RBP16.35■□□□□ 0.21
SMIM28-201ENST00000573100 KIF6Q6ZMV9 814 aa16.35■□□□□ 0.21
SMIM28-201ENST00000573100 MCOLN1Q9GZU1 580 aa16.35■□□□□ 0.21
SMIM28-201ENST00000573100 LTBP1Q14766 1721 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 GPTP24298 496 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 SUSD4Q5VX71 490 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 HHIPL1Q96JK4 782 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 ZNRF3Q9ULT6 936 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
SMIM28-201ENST00000573100 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
SMIM28-201ENST00000573100 CXCL9Q07325 125 aa16.33■□□□□ 0.2
SMIM28-201ENST00000573100 TTLL7Q6ZT98 887 aa16.33■□□□□ 0.2
SMIM28-201ENST00000573100 GLIS2Q9BZE0 524 aaPredicted RBP16.33■□□□□ 0.2
SMIM28-201ENST00000573100 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
SMIM28-201ENST00000573100 AOC3Q16853 763 aa16.32■□□□□ 0.2
SMIM28-201ENST00000573100 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
SMIM28-201ENST00000573100 NLRP3Q96P20 1036 aa16.32■□□□□ 0.2
SMIM28-201ENST00000573100 THSD7BQ9C0I4 1608 aa16.32■□□□□ 0.2
SMIM28-201ENST00000573100 PGAP2Q9UHJ9 254 aa16.32■□□□□ 0.2
SMIM28-201ENST00000573100 ATP6V0A2Q9Y487 856 aa16.32■□□□□ 0.2
SMIM28-201ENST00000573100 UBN2Q6ZU65 1347 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 MYL6BP14649 208 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
SMIM28-201ENST00000573100 DGKZQ13574 1117 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 C3orf67Q6ZVT6 689 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 ZNF34Q8IZ26 560 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
SMIM28-201ENST00000573100 PNISRQ8TF01 805 aaKnown RBP16.31■□□□□ 0.2
SMIM28-201ENST00000573100 ZC3H15Q8WU90 426 aaKnown RBP16.31■□□□□ 0.2
SMIM28-201ENST00000573100 ZBTB3Q9H5J0 574 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 PDE4DIPQ5VU43 2346 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 TRPM7Q96QT4 1865 aa16.31■□□□□ 0.2
SMIM28-201ENST00000573100 RIC1Q4ADV7 1423 aa16.3■□□□□ 0.2
SMIM28-201ENST00000573100 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
SMIM28-201ENST00000573100 CIAPIN1Q6FI81 312 aa16.3■□□□□ 0.2
SMIM28-201ENST00000573100 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
SMIM28-201ENST00000573100 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
SMIM28-201ENST00000573100 ZNF408Q9H9D4 720 aa16.3■□□□□ 0.2
SMIM28-201ENST00000573100 NTSR2O95665 410 aa16.29■□□□□ 0.2
SMIM28-201ENST00000573100 CDC37L1Q7L3B6 337 aa16.29■□□□□ 0.2
SMIM28-201ENST00000573100 CASP8AP2Q9UKL3 1982 aa16.29■□□□□ 0.2
SMIM28-201ENST00000573100 BBOX1O75936 387 aa16.28■□□□□ 0.2
SMIM28-201ENST00000573100 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
SMIM28-201ENST00000573100 EIF4A1P60842 406 aaKnown RBP16.28■□□□□ 0.2
SMIM28-201ENST00000573100 NOGQ13253 232 aa16.28■□□□□ 0.2
SMIM28-201ENST00000573100 TNIP1Q15025 636 aa16.28■□□□□ 0.2
SMIM28-201ENST00000573100 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
SMIM28-201ENST00000573100 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
SMIM28-201ENST00000573100 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
SMIM28-201ENST00000573100 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
SMIM28-201ENST00000573100 RAD17O75943 681 aa16.27■□□□□ 0.2
SMIM28-201ENST00000573100 DPP8Q6V1X1 898 aaPredicted RBP16.27■□□□□ 0.2
SMIM28-201ENST00000573100 SP8Q8IXZ3 490 aa16.27■□□□□ 0.2
SMIM28-201ENST00000573100 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms