RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 CNNM3Q8NE01 707 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 NYXQ9GZU5 481 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 PHF8Q9UPP1 1060 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 RIOK3O14730 519 aaKnown RBP10.86□□□□□ -0.67
USP6-204ENST00000572949 MCM3P25205 808 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 DDX12PQ92771 950 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 C6orf50Q9HD87 102 aa10.86□□□□□ -0.67
USP6-204ENST00000572949 GUCY1B3Q02153 619 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 GPR162Q16538 588 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 CEP135Q66GS9 1140 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 NAA15Q9BXJ9 866 aaKnown RBP10.85□□□□□ -0.67
USP6-204ENST00000572949 IQCGQ9H095 443 aaKnown RBP10.85□□□□□ -0.67
USP6-204ENST00000572949 CASQ1P31415 396 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 PROCA1Q8NCQ7 364 aaPredicted RBP10.85□□□□□ -0.67
USP6-204ENST00000572949 GIMAP7Q8NHV1 300 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 AQRO60306 1485 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP6-204ENST00000572949 PLEKHH2Q8IVE3 1493 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 CALM1P0DP23 149 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 CALM2P0DP24 149 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 CALM3P0DP25 149 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 PPP2R1AP30153 589 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 TMOD4Q9NZQ9 345 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 YEATS4O95619 227 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 SMARCC1Q92922 1105 aaPredicted RBP10.85□□□□□ -0.67
USP6-204ENST00000572949 GBP3Q9H0R5 595 aa10.85□□□□□ -0.67
USP6-204ENST00000572949 RTCBQ9Y3I0 505 aaKnown RBP10.84□□□□□ -0.67
USP6-204ENST00000572949 STK32BQ9NY57 414 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 A0A1W2PRG0 241 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 MCM10Q7L590 875 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
USP6-204ENST00000572949 EXOC6BQ9Y2D4 811 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 C6orf163Q5TEZ5 329 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 MSANTD4Q8NCY6 345 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 TCIRG1Q13488 830 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 PYM1Q9BRP8 204 aaKnown RBP10.84□□□□□ -0.67
USP6-204ENST00000572949 EXOC1Q9NV70 894 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 CAMK4Q16566 473 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 MAP3K11Q16584 847 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 SMC1BQ8NDV3 1235 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 MRVI1Q9Y6F6 885 aa10.84□□□□□ -0.67
USP6-204ENST00000572949 SHTN1A0MZ66 631 aa10.83□□□□□ -0.67
USP6-204ENST00000572949 IFI16Q16666 785 aaKnown RBP10.83□□□□□ -0.67
USP6-204ENST00000572949 NAIPQ13075 1403 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 BACH1O14867 736 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 IFNL2Q8IZJ0 200 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 SP4Q02446 784 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 MAP7D1Q3KQU3 841 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 CCDC8Q9H0W5 538 aaPredicted RBP10.83□□□□□ -0.68
USP6-204ENST00000572949 TXNDC16Q9P2K2 825 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
USP6-204ENST00000572949 EIF6P56537 245 aaKnown RBP10.83□□□□□ -0.68
USP6-204ENST00000572949 SLC8A3P57103 927 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 DDB1Q16531 1140 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 KIF4BQ2VIQ3 1234 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 EAPPQ56P03 285 aaPredicted RBP10.83□□□□□ -0.68
USP6-204ENST00000572949 ANKRD30BQ9BXX2 1392 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 ZSCAN12O43309 604 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 TOP1P11387 765 aaKnown RBP10.83□□□□□ -0.68
USP6-204ENST00000572949 MPNDQ8N594 471 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 KIF22Q14807 665 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 CCDC63Q8NA47 563 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 TRIM6Q9C030 488 aaPredicted RBP10.83□□□□□ -0.68
USP6-204ENST00000572949 FCHSD2O94868 740 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 EYA3Q99504 573 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 ZBTB21Q9ULJ3 1066 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 AMOTL2Q9Y2J4 779 aa10.83□□□□□ -0.68
USP6-204ENST00000572949 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 NBPF7P0C2Y1 421 aaPredicted RBP10.82□□□□□ -0.68
USP6-204ENST00000572949 RNF34Q969K3 372 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 IFIT1BQ5T764 474 aaKnown RBP10.82□□□□□ -0.68
USP6-204ENST00000572949 PRPF40BQ6NWY9 871 aaKnown RBP10.82□□□□□ -0.68
USP6-204ENST00000572949 CCDC83Q8IWF9 413 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 SFPQP23246 707 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP6-204ENST00000572949 HEATR3Q7Z4Q2 680 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 GOLGA1Q92805 767 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 GOLIM4O00461 696 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 CCT2P78371 535 aaKnown RBP10.82□□□□□ -0.68
USP6-204ENST00000572949 WAPLQ7Z5K2 1190 aa10.82□□□□□ -0.68
USP6-204ENST00000572949 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 GABPAQ06546 454 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 GSTA5Q7RTV2 222 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 WDR63Q8IWG1 891 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 KIAA1524Q8TCG1 905 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 ANO10Q9NW15 660 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 DBF4Q9UBU7 674 aaPredicted RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 FAM13AO94988 1023 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 AKNAD1Q5T1N1 836 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 RNF187Q5TA31 235 aaPredicted RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 CPLX3Q8WVH0 158 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 UBXN4Q92575 508 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 BRD4O60885 1362 aaPredicted RBP10.81□□□□□ -0.68
USP6-204ENST00000572949 M0QZ92 97 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 GSDMBQ8TAX9 411 aa10.81□□□□□ -0.68
USP6-204ENST00000572949 ATP5J2-PTCD1G3V325 749 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms