RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 RTKN2Q8IZC4 609 aa27.02■■□□□ 1.92
CHRNB1-204ENST00000572857 ZNF277Q9NRM2 450 aaPredicted RBP27.02■■□□□ 1.92
CHRNB1-204ENST00000572857 GNAI1P63096 354 aa27.01■■□□□ 1.91
CHRNB1-204ENST00000572857 C3orf67Q6ZVT6 689 aa27.01■■□□□ 1.91
CHRNB1-204ENST00000572857 IFT57Q9NWB7 429 aa27.01■■□□□ 1.91
CHRNB1-204ENST00000572857 DBF4Q9UBU7 674 aaPredicted RBP27.01■■□□□ 1.91
CHRNB1-204ENST00000572857 CEP350Q5VT06 3117 aa27.01■■□□□ 1.91
CHRNB1-204ENST00000572857 ELL2O00472 640 aaPredicted RBP27■■□□□ 1.91
CHRNB1-204ENST00000572857 HOXA10P31260 410 aaPredicted RBP27■■□□□ 1.91
CHRNB1-204ENST00000572857 APLP1P51693 650 aa27■■□□□ 1.91
CHRNB1-204ENST00000572857 FSTL1Q12841 308 aa27■■□□□ 1.91
CHRNB1-204ENST00000572857 TCIRG1Q13488 830 aa27■■□□□ 1.91
CHRNB1-204ENST00000572857 ZNF428Q96B54 188 aa27■■□□□ 1.91
CHRNB1-204ENST00000572857 RBM17Q96I25 401 aaKnown RBP27■■□□□ 1.91
CHRNB1-204ENST00000572857 NLRP3Q96P20 1036 aa27■■□□□ 1.91
CHRNB1-204ENST00000572857 FER1L6Q2WGJ9 1857 aa27■■□□□ 1.91
CHRNB1-204ENST00000572857 TCERG1O14776 1098 aaKnown RBP26.99■■□□□ 1.91
CHRNB1-204ENST00000572857 NLRP10Q86W26 655 aa26.99■■□□□ 1.91
CHRNB1-204ENST00000572857 CACNA1SQ13698 1873 aa26.99■■□□□ 1.91
CHRNB1-204ENST00000572857 TNRC6CQ9HCJ0 1690 aaKnown RBP26.98■■□□□ 1.91
CHRNB1-204ENST00000572857 DDNO94850 711 aaPredicted RBP26.98■■□□□ 1.91
CHRNB1-204ENST00000572857 SYNE4Q8N205 404 aa26.98■■□□□ 1.91
CHRNB1-204ENST00000572857 TRMT112Q9UI30 125 aaKnown RBP26.98■■□□□ 1.91
CHRNB1-204ENST00000572857 CCDC88AQ3V6T2 1871 aa26.98■■□□□ 1.91
CHRNB1-204ENST00000572857 POTECB2RU33 542 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 ANP32CO43423 234 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 SLC10A5Q5PT55 438 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 ANKRD13DQ6ZTN6 518 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 SMC1BQ8NDV3 1235 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 PLBD2Q8NHP8 589 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 CRAMP1Q96RY5 1269 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 HYPKQ9NX55 129 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 RIC1Q4ADV7 1423 aa26.97■■□□□ 1.91
CHRNB1-204ENST00000572857 HCLS1P14317 486 aaPredicted RBP26.96■■□□□ 1.91
CHRNB1-204ENST00000572857 MRS2Q9HD23 443 aa26.96■■□□□ 1.91
CHRNB1-204ENST00000572857 TIAM2Q8IVF5 1701 aa26.96■■□□□ 1.91
CHRNB1-204ENST00000572857 ARFGEF2Q9Y6D5 1785 aa26.95■■□□□ 1.9
CHRNB1-204ENST00000572857 CC2D2BQ6DHV5 1058 aa26.95■■□□□ 1.9
CHRNB1-204ENST00000572857 PPEF1O14829 653 aaPredicted RBP26.94■■□□□ 1.9
CHRNB1-204ENST00000572857 ATP5J2-PTCD1G3V325 749 aa26.93■■□□□ 1.9
CHRNB1-204ENST00000572857 IARSP41252 1262 aaKnown RBP26.93■■□□□ 1.9
CHRNB1-204ENST00000572857 SLC51AQ86UW1 340 aa26.93■■□□□ 1.9
CHRNB1-204ENST00000572857 C8orf58Q8NAV2 365 aa26.93■■□□□ 1.9
CHRNB1-204ENST00000572857 RNF123Q5XPI4 1314 aa26.92■■□□□ 1.9
CHRNB1-204ENST00000572857 SH3TC1Q8TE82 1336 aa26.92■■□□□ 1.9
CHRNB1-204ENST00000572857 HTRA3P83110 453 aa26.91■■□□□ 1.9
CHRNB1-204ENST00000572857 PSMD1Q99460 953 aa26.91■■□□□ 1.9
CHRNB1-204ENST00000572857 TMX4Q9H1E5 349 aaPredicted RBP26.9■■□□□ 1.9
CHRNB1-204ENST00000572857 RIC3Q7Z5B4 369 aa26.89■■□□□ 1.9
CHRNB1-204ENST00000572857 JDP2Q8WYK2 163 aa26.89■■□□□ 1.9
CHRNB1-204ENST00000572857 ISCA1Q9BUE6 129 aa26.89■■□□□ 1.9
CHRNB1-204ENST00000572857 PHAXQ9H814 394 aaKnown RBP26.89■■□□□ 1.9
CHRNB1-204ENST00000572857 ZNF541Q9H0D2 1346 aa26.89■■□□□ 1.89
CHRNB1-204ENST00000572857 GOLGA2Q08379 1002 aa26.88■■□□□ 1.89
CHRNB1-204ENST00000572857 GRIPAP1Q4V328 841 aa26.88■■□□□ 1.89
CHRNB1-204ENST00000572857 TSR2Q969E8 191 aaKnown RBP26.88■■□□□ 1.89
CHRNB1-204ENST00000572857 ABCC4O15439 1325 aa26.88■■□□□ 1.89
CHRNB1-204ENST00000572857 DICER1Q9UPY3 1922 aaKnown RBP26.87■■□□□ 1.89
CHRNB1-204ENST00000572857 RTL5Q5HYW3 569 aaPredicted RBP26.87■■□□□ 1.89
CHRNB1-204ENST00000572857 WWC1Q8IX03 1113 aa26.87■■□□□ 1.89
CHRNB1-204ENST00000572857 FAM89AQ96GI7 184 aa26.87■■□□□ 1.89
CHRNB1-204ENST00000572857 ATP6V0A2Q9Y487 856 aa26.87■■□□□ 1.89
CHRNB1-204ENST00000572857 DDX46Q7L014 1031 aaKnown RBP26.86■■□□□ 1.89
CHRNB1-204ENST00000572857 DNAJC5GQ8N7S2 189 aa26.86■■□□□ 1.89
CHRNB1-204ENST00000572857 TSPYL6Q8N831 410 aa26.86■■□□□ 1.89
CHRNB1-204ENST00000572857 SNED1Q8TER0 1413 aa26.86■■□□□ 1.89
CHRNB1-204ENST00000572857 WDR90Q96KV7 1748 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 IQCA1LA6NCM1 817 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 FZD9O00144 591 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 BBOX1O75936 387 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 CCDC27Q2M243 656 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 CCDC30Q5VVM6 783 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 LARGE2Q8N3Y3 721 aa26.85■■□□□ 1.89
CHRNB1-204ENST00000572857 L3MBTL3Q96JM7 780 aaPredicted RBP26.84■■□□□ 1.89
CHRNB1-204ENST00000572857 SALL2Q9Y467 1007 aaPredicted RBP26.84■■□□□ 1.89
CHRNB1-204ENST00000572857 POTEIP0CG38 1075 aa26.83■■□□□ 1.89
CHRNB1-204ENST00000572857 POTEJP0CG39 1038 aa26.83■■□□□ 1.89
CHRNB1-204ENST00000572857 CHMP4AQ9BY43 222 aa26.83■■□□□ 1.89
CHRNB1-204ENST00000572857 TRIM28Q13263 835 aaKnown RBP26.82■■□□□ 1.88
CHRNB1-204ENST00000572857 MYD88Q99836 296 aa26.82■■□□□ 1.88
CHRNB1-204ENST00000572857 EIF6P56537 245 aaKnown RBP26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 GRAPQ13588 217 aa26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 CHADLQ6NUI6 762 aa26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 SP8Q8IXZ3 490 aa26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 GRAPLQ8TC17 118 aaPredicted RBP26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 TAF1DQ9H5J8 278 aaPredicted RBP26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 GJA3Q9Y6H8 435 aa26.81■■□□□ 1.88
CHRNB1-204ENST00000572857 ANKRD36CQ5JPF3 1778 aa26.8■■□□□ 1.88
CHRNB1-204ENST00000572857 PPIP5K2O43314 1243 aa26.8■■□□□ 1.88
CHRNB1-204ENST00000572857 HACL1Q9UJ83 578 aa26.8■■□□□ 1.88
CHRNB1-204ENST00000572857 IRS4O14654 1257 aaPredicted RBP26.79■■□□□ 1.88
CHRNB1-204ENST00000572857 AOC3Q16853 763 aa26.79■■□□□ 1.88
CHRNB1-204ENST00000572857 EAPPQ56P03 285 aaPredicted RBP26.79■■□□□ 1.88
CHRNB1-204ENST00000572857 DPP8Q6V1X1 898 aaPredicted RBP26.79■■□□□ 1.88
CHRNB1-204ENST00000572857 NIM1KQ8IY84 436 aa26.79■■□□□ 1.88
CHRNB1-204ENST00000572857 GPC2Q8N158 579 aa26.79■■□□□ 1.88
CHRNB1-204ENST00000572857 DDX58O95786 925 aaKnown RBP26.78■■□□□ 1.88
CHRNB1-204ENST00000572857 MPNDQ8N594 471 aa26.78■■□□□ 1.88
CHRNB1-204ENST00000572857 SF3B3Q15393 1217 aaKnown RBP26.77■■□□□ 1.88
CHRNB1-204ENST00000572857 TWISTNBQ3B726 338 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms