RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 TRMT112Q9UI30 125 aaKnown RBP26.56■■□□□ 1.84
CHMP6-204ENST00000572778 SLC4A2P04920 1241 aa26.55■■□□□ 1.84
CHMP6-204ENST00000572778 CHD4Q14839 1912 aa26.55■■□□□ 1.84
CHMP6-204ENST00000572778 ZNF784Q8NCA9 323 aaPredicted RBP26.54■■□□□ 1.84
CHMP6-204ENST00000572778 ISCA1Q9BUE6 129 aa26.54■■□□□ 1.84
CHMP6-204ENST00000572778 C21orf2O43822 256 aa26.53■■□□□ 1.84
CHMP6-204ENST00000572778 PRPF40BQ6NWY9 871 aaKnown RBP26.53■■□□□ 1.84
CHMP6-204ENST00000572778 MYD88Q99836 296 aa26.53■■□□□ 1.84
CHMP6-204ENST00000572778 COL11A2P13942 1736 aaPredicted RBP26.53■■□□□ 1.84
CHMP6-204ENST00000572778 RNF123Q5XPI4 1314 aa26.52■■□□□ 1.84
CHMP6-204ENST00000572778 G2E3Q7L622 706 aa26.52■■□□□ 1.84
CHMP6-204ENST00000572778 DLEC1Q9Y238 1755 aa26.52■■□□□ 1.84
CHMP6-204ENST00000572778 E9PSI1 815 aa26.51■■□□□ 1.83
CHMP6-204ENST00000572778 SLC10A5Q5PT55 438 aa26.51■■□□□ 1.83
CHMP6-204ENST00000572778 SYNE4Q8N205 404 aa26.51■■□□□ 1.83
CHMP6-204ENST00000572778 RPGRQ92834 1020 aaKnown RBP26.51■■□□□ 1.83
CHMP6-204ENST00000572778 NLRP3Q96P20 1036 aa26.51■■□□□ 1.83
CHMP6-204ENST00000572778 MAP3K2Q9Y2U5 619 aa26.51■■□□□ 1.83
CHMP6-204ENST00000572778 SH3TC1Q8TE82 1336 aa26.5■■□□□ 1.83
CHMP6-204ENST00000572778 HCLS1P14317 486 aaPredicted RBP26.5■■□□□ 1.83
CHMP6-204ENST00000572778 ALDH1B1P30837 517 aa26.5■■□□□ 1.83
CHMP6-204ENST00000572778 CRY2Q49AN0 593 aa26.5■■□□□ 1.83
CHMP6-204ENST00000572778 KSR2Q6VAB6 950 aa26.5■■□□□ 1.83
CHMP6-204ENST00000572778 RIC1Q4ADV7 1423 aa26.49■■□□□ 1.83
CHMP6-204ENST00000572778 ARFGEF1Q9Y6D6 1849 aa26.49■■□□□ 1.83
CHMP6-204ENST00000572778 PI4KAP2A4QPH2 592 aa26.49■■□□□ 1.83
CHMP6-204ENST00000572778 RASSF7Q02833 373 aa26.49■■□□□ 1.83
CHMP6-204ENST00000572778 TRIM28Q13263 835 aaKnown RBP26.49■■□□□ 1.83
CHMP6-204ENST00000572778 C3orf67Q6ZVT6 689 aa26.49■■□□□ 1.83
CHMP6-204ENST00000572778 PI4KAP1Q8N8J0 262 aa26.49■■□□□ 1.83
CHMP6-204ENST00000572778 METTL22Q9BUU2 404 aaPredicted RBP26.49■■□□□ 1.83
CHMP6-204ENST00000572778 SLFN5Q08AF3 891 aa26.48■■□□□ 1.83
CHMP6-204ENST00000572778 C9orf131Q5VYM1 1079 aa26.48■■□□□ 1.83
CHMP6-204ENST00000572778 FLIIQ13045 1269 aa26.47■■□□□ 1.83
CHMP6-204ENST00000572778 RTL5Q5HYW3 569 aaPredicted RBP26.47■■□□□ 1.83
CHMP6-204ENST00000572778 FAM89AQ96GI7 184 aa26.47■■□□□ 1.83
CHMP6-204ENST00000572778 CDCA7LQ96GN5 454 aa26.47■■□□□ 1.83
CHMP6-204ENST00000572778 RBM17Q96I25 401 aaKnown RBP26.47■■□□□ 1.83
CHMP6-204ENST00000572778 TNRC6CQ9HCJ0 1690 aaKnown RBP26.47■■□□□ 1.83
CHMP6-204ENST00000572778 ANKRD36CQ5JPF3 1778 aa26.46■■□□□ 1.83
CHMP6-204ENST00000572778 RNF181Q9P0P0 153 aa26.46■■□□□ 1.83
CHMP6-204ENST00000572778 SOGA3Q5TF21 947 aa26.45■■□□□ 1.82
CHMP6-204ENST00000572778 NFKBIEO00221 500 aa26.44■■□□□ 1.82
CHMP6-204ENST00000572778 HOXA10P31260 410 aaPredicted RBP26.44■■□□□ 1.82
CHMP6-204ENST00000572778 NEXNQ0ZGT2 675 aa26.44■■□□□ 1.82
CHMP6-204ENST00000572778 FKBP5Q13451 457 aaPredicted RBP26.44■■□□□ 1.82
CHMP6-204ENST00000572778 CCDC191Q8NCU4 936 aa26.44■■□□□ 1.82
CHMP6-204ENST00000572778 ADCY9O60503 1353 aa26.44■■□□□ 1.82
CHMP6-204ENST00000572778 ARFGEF2Q9Y6D5 1785 aa26.43■■□□□ 1.82
CHMP6-204ENST00000572778 ZNF526Q8TF50 670 aaPredicted RBP26.43■■□□□ 1.82
CHMP6-204ENST00000572778 C7orf43Q8WVR3 580 aa26.43■■□□□ 1.82
CHMP6-204ENST00000572778 CRAMP1Q96RY5 1269 aa26.43■■□□□ 1.82
CHMP6-204ENST00000572778 CWC25Q9NXE8 425 aaPredicted RBP26.43■■□□□ 1.82
CHMP6-204ENST00000572778 LMNB1P20700 586 aa26.42■■□□□ 1.82
CHMP6-204ENST00000572778 CCDC93Q567U6 631 aa26.42■■□□□ 1.82
CHMP6-204ENST00000572778 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
CHMP6-204ENST00000572778 ZBTB38Q8NAP3 1195 aaPredicted RBP26.41■■□□□ 1.82
CHMP6-204ENST00000572778 SLX4Q8IY92 1834 aa26.41■■□□□ 1.82
CHMP6-204ENST00000572778 IRS4O14654 1257 aaPredicted RBP26.4■■□□□ 1.82
CHMP6-204ENST00000572778 PRELPP51888 382 aa26.4■■□□□ 1.82
CHMP6-204ENST00000572778 TAOK3Q9H2K8 898 aa26.4■■□□□ 1.82
CHMP6-204ENST00000572778 IGKV5-2P06315 115 aa26.39■■□□□ 1.82
CHMP6-204ENST00000572778 JARID2Q92833 1246 aaPredicted RBP26.39■■□□□ 1.82
CHMP6-204ENST00000572778 PCCAP05165 728 aaPredicted RBP26.38■■□□□ 1.81
CHMP6-204ENST00000572778 CWF19L2Q2TBE0 894 aaKnown RBP26.38■■□□□ 1.81
CHMP6-204ENST00000572778 DDX46Q7L014 1031 aaKnown RBP26.38■■□□□ 1.81
CHMP6-204ENST00000572778 DNAAF4Q8WXU2 420 aa26.38■■□□□ 1.81
CHMP6-204ENST00000572778 GPBP1L1Q9HC44 474 aaPredicted RBP26.38■■□□□ 1.81
CHMP6-204ENST00000572778 PPEF1O14829 653 aaPredicted RBP26.37■■□□□ 1.81
CHMP6-204ENST00000572778 TRMT2AQ8IZ69 625 aaKnown RBP26.37■■□□□ 1.81
CHMP6-204ENST00000572778 RTKN2Q8IZC4 609 aa26.37■■□□□ 1.81
CHMP6-204ENST00000572778 ABCC4O15439 1325 aa26.37■■□□□ 1.81
CHMP6-204ENST00000572778 NEURL1BA8MQ27 555 aa26.36■■□□□ 1.81
CHMP6-204ENST00000572778 HSP90B1P14625 803 aaKnown RBP26.36■■□□□ 1.81
CHMP6-204ENST00000572778 HNRNPUQ00839 825 aaKnown RBP eCLIP26.36■■□□□ 1.81
CHMP6-204ENST00000572778 LTBP3Q9NS15 1303 aa26.36■■□□□ 1.81
CHMP6-204ENST00000572778 F6X3S4 739 aa26.35■■□□□ 1.81
CHMP6-204ENST00000572778 CACNA1SQ13698 1873 aa26.35■■□□□ 1.81
CHMP6-204ENST00000572778 SF3B3Q15393 1217 aaKnown RBP26.34■■□□□ 1.81
CHMP6-204ENST00000572778 CC2D2BQ6DHV5 1058 aa26.34■■□□□ 1.81
CHMP6-204ENST00000572778 TMX4Q9H1E5 349 aaPredicted RBP26.34■■□□□ 1.81
CHMP6-204ENST00000572778 BBOX1O75936 387 aa26.33■■□□□ 1.81
CHMP6-204ENST00000572778 FKBP4Q02790 459 aaKnown RBP eCLIP26.33■■□□□ 1.81
CHMP6-204ENST00000572778 GRAPQ13588 217 aa26.32■■□□□ 1.8
CHMP6-204ENST00000572778 MRPL50Q8N5N7 158 aaKnown RBP26.32■■□□□ 1.8
CHMP6-204ENST00000572778 LINS1Q8NG48 757 aa26.32■■□□□ 1.8
CHMP6-204ENST00000572778 GRAPLQ8TC17 118 aaPredicted RBP26.32■■□□□ 1.8
CHMP6-204ENST00000572778 PDE8AO60658 829 aa26.31■■□□□ 1.8
CHMP6-204ENST00000572778 SLC51AQ86UW1 340 aa26.31■■□□□ 1.8
CHMP6-204ENST00000572778 SSH1Q8WYL5 1049 aa26.31■■□□□ 1.8
CHMP6-204ENST00000572778 ZNF277Q9NRM2 450 aaPredicted RBP26.31■■□□□ 1.8
CHMP6-204ENST00000572778 ATP6V0A2Q9Y487 856 aa26.31■■□□□ 1.8
CHMP6-204ENST00000572778 GCKRQ14397 625 aa26.3■■□□□ 1.8
CHMP6-204ENST00000572778 BCL2L13Q9BXK5 485 aa26.3■■□□□ 1.8
CHMP6-204ENST00000572778 CDHR2Q9BYE9 1310 aa26.3■■□□□ 1.8
CHMP6-204ENST00000572778 GRIPAP1Q4V328 841 aa26.29■■□□□ 1.8
CHMP6-204ENST00000572778 UBE3BQ7Z3V4 1068 aa26.29■■□□□ 1.8
CHMP6-204ENST00000572778 ZC3H4Q9UPT8 1303 aaKnown RBP26.29■■□□□ 1.8
CHMP6-204ENST00000572778 FER1L6Q2WGJ9 1857 aa26.28■■□□□ 1.8
CHMP6-204ENST00000572778 H7C1W4 665 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms