RNA–Protein interactions for RNA: ENST00000572445.1

PRPF8-204, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-204ENST00000572445 CGNL1Q0VF96 1302 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 LILRB3O75022 631 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 ATP6V1AP38606 617 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 ITPK1Q13572 414 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 PUS7Q96PZ0 661 aaKnown RBP8.6□□□□□ -1.03
PRPF8-204ENST00000572445 EYA1Q99502 592 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 FAM198AQ9UFP1 575 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 PCDHGA4Q9Y5G9 962 aa8.6□□□□□ -1.03
PRPF8-204ENST00000572445 MYH14Q7Z406 1995 aaKnown RBP8.59□□□□□ -1.03
PRPF8-204ENST00000572445 LOC102724428A0A0B4J2F2 783 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 FOSBP53539 338 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 SIK1P57059 783 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 EVX2Q03828 476 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 EIF4A2Q14240 407 aaKnown RBP8.59□□□□□ -1.03
PRPF8-204ENST00000572445 CDCA8Q53HL2 280 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 HDGFL1Q5TGJ6 251 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 ZNF710Q8N1W2 664 aa8.59□□□□□ -1.03
PRPF8-204ENST00000572445 SMARCC1Q92922 1105 aaPredicted RBP8.59□□□□□ -1.03
PRPF8-204ENST00000572445 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
PRPF8-204ENST00000572445 KIAA1551Q9HCM1 1747 aa8.58□□□□□ -1.04
PRPF8-204ENST00000572445 RCCD1A6NED2 376 aa8.58□□□□□ -1.04
PRPF8-204ENST00000572445 BRD1O95696 1058 aa8.58□□□□□ -1.04
PRPF8-204ENST00000572445 MMP10P09238 476 aa8.58□□□□□ -1.04
PRPF8-204ENST00000572445 KCNA1Q09470 495 aa8.58□□□□□ -1.04
PRPF8-204ENST00000572445 ZNF530Q6P9A1 599 aaPredicted RBP8.58□□□□□ -1.04
PRPF8-204ENST00000572445 TJP1Q07157 1748 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 POTEFA5A3E0 1075 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 C3orf80F5H4A9 247 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 GRIN3BO60391 1043 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 PTCD1O75127 700 aaKnown RBP8.57□□□□□ -1.04
PRPF8-204ENST00000572445 PHKG2P15735 406 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 PRSS12P56730 875 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
PRPF8-204ENST00000572445 POLKQ9UBT6 870 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 BCS1LQ9Y276 419 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 USTQ9Y2C2 406 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 CACNA1SQ13698 1873 aa8.57□□□□□ -1.04
PRPF8-204ENST00000572445 KDM6AO15550 1401 aaPredicted RBP8.56□□□□□ -1.04
PRPF8-204ENST00000572445 NCAPD2Q15021 1401 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 SCN11AQ9UI33 1791 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 BRCA1P38398 1863 aaKnown RBP8.56□□□□□ -1.04
PRPF8-204ENST00000572445 HSPA5P11021 654 aaKnown RBP8.56□□□□□ -1.04
PRPF8-204ENST00000572445 IFNL2Q8IZJ0 200 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 CDCA7LQ96GN5 454 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 ADAM33Q9BZ11 813 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 HMX1Q9NP08 348 aaPredicted RBP8.56□□□□□ -1.04
PRPF8-204ENST00000572445 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 KIF13BQ9NQT8 1826 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
PRPF8-204ENST00000572445 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 SSFA2P28290 1259 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 PDE4CQ08493 712 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 NUTM1Q86Y26 1132 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 FLAD1Q8NFF5 587 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 PANK3Q9H999 370 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 SRP68Q9UHB9 627 aaKnown RBP8.55□□□□□ -1.04
PRPF8-204ENST00000572445 CD2APQ9Y5K6 639 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 KDRP35968 1356 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 KIF24Q5T7B8 1368 aa8.55□□□□□ -1.04
PRPF8-204ENST00000572445 WASHC2AQ641Q2 1341 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 ADCY9O60503 1353 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 SEC24BO95487 1268 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 CABP4P57796 275 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 C1orf141Q5JVX7 400 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 MORC1Q86VD1 984 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 ZNF454Q8N9F8 522 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 TRIM34Q9BYJ4 488 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 PRM3Q9NNZ6 103 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 RTCBQ9Y3I0 505 aaKnown RBP8.54□□□□□ -1.04
PRPF8-204ENST00000572445 NDUFB9Q9Y6M9 179 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 IVNS1ABPQ9Y6Y0 642 aa8.54□□□□□ -1.04
PRPF8-204ENST00000572445 AFDNP55196 1824 aaKnown RBP8.53□□□□□ -1.04
PRPF8-204ENST00000572445 VAC14Q08AM6 782 aa8.53□□□□□ -1.04
PRPF8-204ENST00000572445 ARHGAP27Q6ZUM4 889 aa8.53□□□□□ -1.04
PRPF8-204ENST00000572445 C3orf67Q6ZVT6 689 aa8.53□□□□□ -1.04
PRPF8-204ENST00000572445 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
PRPF8-204ENST00000572445 SLC4A9Q96Q91 983 aa8.53□□□□□ -1.04
PRPF8-204ENST00000572445 CCDC88AQ3V6T2 1871 aa8.53□□□□□ -1.04
PRPF8-204ENST00000572445 C10orf71Q711Q0 1435 aa8.53□□□□□ -1.04
PRPF8-204ENST00000572445 ARFGEF1Q9Y6D6 1849 aa8.52□□□□□ -1.04
PRPF8-204ENST00000572445 PATL2C9JE40 543 aaKnown RBP8.52□□□□□ -1.05
PRPF8-204ENST00000572445 HMOX1P09601 288 aa8.52□□□□□ -1.05
PRPF8-204ENST00000572445 DPEP1P16444 411 aa8.52□□□□□ -1.05
PRPF8-204ENST00000572445 RFC4P35249 363 aa8.52□□□□□ -1.05
PRPF8-204ENST00000572445 EIF4G2P78344 907 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRPF8-204ENST00000572445 PLEKHO1Q53GL0 409 aaPredicted RBP8.52□□□□□ -1.05
PRPF8-204ENST00000572445 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
PRPF8-204ENST00000572445 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
PRPF8-204ENST00000572445 UCN2Q96RP3 112 aa8.52□□□□□ -1.05
PRPF8-204ENST00000572445 GJA5P36382 358 aa8.51□□□□□ -1.05
PRPF8-204ENST00000572445 CRKLP46109 303 aaKnown RBP8.51□□□□□ -1.05
PRPF8-204ENST00000572445 MTHFSP49914 203 aa8.51□□□□□ -1.05
PRPF8-204ENST00000572445 NMRK2Q9NPI5 230 aa8.51□□□□□ -1.05
PRPF8-204ENST00000572445 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
PRPF8-204ENST00000572445 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
PRPF8-204ENST00000572445 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms