RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 TM4SF1P30408 202 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 DDR1Q08345 913 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 CCDC191Q8NCU4 936 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 NYXQ9GZU5 481 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 SPON1Q9HCB6 807 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 TNNQ9UQP3 1299 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 UBR3Q6ZT12 1888 aa11.93□□□□□ -0.5
NPLOC4-208ENST00000572351 POLRMTO00411 1230 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 ST5P78524 1137 aa11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 SUSD4Q5VX71 490 aa11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 TMEM57Q8N5G2 664 aa11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 PANK1Q8TE04 598 aa11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 C9orf78Q9NZ63 289 aaPredicted RBP11.92□□□□□ -0.5
NPLOC4-208ENST00000572351 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 PXDNLA1KZ92 1463 aa11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 GCKRQ14397 625 aa11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 INTS3Q68E01 1043 aaKnown RBP11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 SCN7AQ01118 1682 aa11.91□□□□□ -0.5
NPLOC4-208ENST00000572351 NTSR2O95665 410 aa11.9□□□□□ -0.5
NPLOC4-208ENST00000572351 RLBP1P12271 317 aa11.9□□□□□ -0.5
NPLOC4-208ENST00000572351 HSP90B1P14625 803 aaKnown RBP11.9□□□□□ -0.5
NPLOC4-208ENST00000572351 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
NPLOC4-208ENST00000572351 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-208ENST00000572351 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
NPLOC4-208ENST00000572351 RNF123Q5XPI4 1314 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 C4AP0C0L4 1744 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 GRM8O00222 908 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 ERFEQ4G0M1 354 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 UBE3BQ7Z3V4 1068 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 CCDC24Q8N4L8 307 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 JARID2Q92833 1246 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 FAM89AQ96GI7 184 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 COG6Q9Y2V7 657 aa11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 IBTKQ9P2D0 1353 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-208ENST00000572351 IRS4O14654 1257 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 PCCAP05165 728 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 PTGER2P43116 358 aa11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 MVPQ14764 893 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 RNF39Q9H2S5 420 aa11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 QSER1Q2KHR3 1735 aa11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
NPLOC4-208ENST00000572351 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
NPLOC4-208ENST00000572351 GNAI3P08754 354 aa11.87□□□□□ -0.51
NPLOC4-208ENST00000572351 HCLS1P14317 486 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-208ENST00000572351 DDX19BQ9UMR2 479 aa11.87□□□□□ -0.51
NPLOC4-208ENST00000572351 BCORQ6W2J9 1755 aa11.87□□□□□ -0.51
NPLOC4-208ENST00000572351 H7C1W4 665 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 NEFLP07196 543 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 NBPF7P0C2Y1 421 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 NLRP3Q96P20 1036 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 MEIS3Q99687 375 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 BRIP1Q9BX63 1249 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 USP44Q9H0E7 712 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
NPLOC4-208ENST00000572351 ABCC12Q96J65 1359 aa11.85□□□□□ -0.51
NPLOC4-208ENST00000572351 PDE6BP35913 854 aa11.85□□□□□ -0.51
NPLOC4-208ENST00000572351 IRX6P78412 446 aaPredicted RBP11.85□□□□□ -0.51
NPLOC4-208ENST00000572351 CRBNQ96SW2 442 aa11.85□□□□□ -0.51
NPLOC4-208ENST00000572351 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
NPLOC4-208ENST00000572351 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 PDE8AO60658 829 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 GNAI2P04899 355 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 CASP7P55210 303 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 SLC10A5Q5PT55 438 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 SUCLG2Q96I99 432 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 CCDC85AQ96PX6 553 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 UTYO14607 1347 aa11.84□□□□□ -0.51
NPLOC4-208ENST00000572351 H0YIN7 160 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 CTSWP56202 376 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 CCDC152Q4G0S7 254 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 C2CD5Q86YS7 1000 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 C1orf115Q9H7X2 142 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 PDZRN3Q9UPQ7 1066 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 LRRFIP2Q9Y608 721 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 C10orf71Q711Q0 1435 aa11.83□□□□□ -0.52
NPLOC4-208ENST00000572351 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
NPLOC4-208ENST00000572351 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
NPLOC4-208ENST00000572351 FHDC1Q9C0D6 1143 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-208ENST00000572351 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-208ENST00000572351 CHRNA5P30532 468 aa11.81□□□□□ -0.52
NPLOC4-208ENST00000572351 TGFB2P61812 414 aa11.81□□□□□ -0.52
NPLOC4-208ENST00000572351 LMBR1LQ6UX01 489 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms